Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS07030

Experiment: Trisodium citrate (C); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Trisodium citrate (C); with MOPS
1,569,640	+		PFLU_RS07020	0.35	-1.8
1,569,640	+		PFLU_RS07020	0.35	+0.1
1,569,640	+		PFLU_RS07020	0.35	+0.5
1,569,640	+		PFLU_RS07020	0.35	+0.0
1,569,640	+		PFLU_RS07020	0.35	+0.4
1,569,641	-		PFLU_RS07020	0.35	+0.9
1,569,641	-		PFLU_RS07020	0.35	+0.8
1,569,740	+		PFLU_RS07020	0.54	-0.8
1,569,740	+		PFLU_RS07020	0.54	-0.0
1,569,740	+		PFLU_RS07020	0.54	+0.1
1,569,740	+		PFLU_RS07020	0.54	+1.3
1,569,740	+		PFLU_RS07020	0.54	-0.6
1,569,740	+		PFLU_RS07020	0.54	-1.0
1,569,740	+		PFLU_RS07020	0.54	-0.9
1,569,741	-		PFLU_RS07020	0.54	-0.2
1,569,741	-		PFLU_RS07020	0.54	+0.5
1,569,741	-		PFLU_RS07020	0.54	-0.4
1,569,741	-		PFLU_RS07020	0.54	+0.1
1,569,741	-		PFLU_RS07020	0.54	-0.5
1,569,741	-		PFLU_RS07020	0.54	+0.8
1,569,741	-		PFLU_RS07020	0.54	-0.5
1,569,744	+		PFLU_RS07020	0.54	-0.5
1,569,744	+		PFLU_RS07020	0.54	-0.9
1,569,744	+		PFLU_RS07020	0.54	+1.7
1,569,745	-		PFLU_RS07020	0.55	-0.2
1,569,799	+		PFLU_RS07020	0.65	-0.9
1,569,800	-		PFLU_RS07020	0.65	+0.4
1,569,800	-		PFLU_RS07020	0.65	-2.2
1,569,881	+		PFLU_RS07020	0.80	+0.5
1,569,881	+		PFLU_RS07020	0.80	+0.6
1,569,881	+		PFLU_RS07020	0.80	-0.2
1,569,909	+		PFLU_RS07020	0.86	-1.0
1,569,909	+		PFLU_RS07020	0.86	+0.5
1,569,910	-		PFLU_RS07020	0.86	+0.4
1,569,910	-		PFLU_RS07020	0.86	+0.5
1,569,910	-		PFLU_RS07020	0.86	+0.2
1,569,955	+				-0.6
1,570,168	-		PFLU_RS07025	0.30	-0.5
1,570,349	+		PFLU_RS07025	0.73	+0.9
1,570,359	-		PFLU_RS07025	0.75	+0.4
1,570,359	-		PFLU_RS07025	0.75	+0.5
1,570,359	-		PFLU_RS07025	0.75	-0.6
1,570,403	+		PFLU_RS07025	0.85	+0.3
1,570,403	+		PFLU_RS07025	0.85	-0.6
1,570,404	-		PFLU_RS07025	0.86	+1.1
1,570,410	+		PFLU_RS07025	0.87	+0.5
1,570,410	+		PFLU_RS07025	0.87	+0.3
1,570,411	-		PFLU_RS07025	0.87	+0.5
1,570,411	-		PFLU_RS07025	0.87	+1.2
1,570,411	-		PFLU_RS07025	0.87	-0.1
1,570,580	+				+1.3
1,570,625	+				+0.4
1,570,625	+				-0.2
1,570,626	-				-0.4
1,570,626	-				-0.3
1,570,626	-				-0.6
1,570,626	-				-0.9
1,570,717	-		PFLU_RS07030	0.28	+0.4
1,570,735	+		PFLU_RS07030	0.31	-1.4
1,570,736	-		PFLU_RS07030	0.31	+1.0
1,570,736	-		PFLU_RS07030	0.31	-0.2
1,570,736	-		PFLU_RS07030	0.31	-1.9
1,570,736	-		PFLU_RS07030	0.31	-0.3
1,570,736	-		PFLU_RS07030	0.31	+1.3
1,570,736	-		PFLU_RS07030	0.31	+0.1
1,570,744	+		PFLU_RS07030	0.33	+0.5
1,570,744	+		PFLU_RS07030	0.33	+0.8
1,570,745	-		PFLU_RS07030	0.33	+1.4
1,570,784	+		PFLU_RS07030	0.41	-0.3
1,570,784	+		PFLU_RS07030	0.41	+0.6
1,570,813	+		PFLU_RS07030	0.47	+0.8
1,570,898	+		PFLU_RS07030	0.64	-0.8
1,570,898	+		PFLU_RS07030	0.64	-0.1
1,570,899	-		PFLU_RS07030	0.64	+0.9
1,570,899	-		PFLU_RS07030	0.64	-0.6
1,571,066	+				+0.6
1,571,066	+				-0.6
1,571,066	+				-1.8
1,571,066	+				-0.0
1,571,067	-				+1.2
1,571,067	-				-1.1
1,571,067	-				-0.4
1,571,085	+				+0.3
1,571,100	+				-0.7
1,571,101	-				+1.3
1,571,101	-				+1.6
1,571,111	+				-0.3
1,571,160	+				-0.5
1,571,160	+				+0.2
1,571,161	-				+0.5
1,571,161	-				-0.7
1,571,202	+		PFLU_RS07035	0.10	-1.4
1,571,202	+		PFLU_RS07035	0.10	-1.8
1,571,224	+		PFLU_RS07035	0.17	-0.3
1,571,224	+		PFLU_RS07035	0.17	-0.6
1,571,224	+		PFLU_RS07035	0.17	-1.0
1,571,224	+		PFLU_RS07035	0.17	-1.0
1,571,224	+		PFLU_RS07035	0.17	-2.7
1,571,224	+		PFLU_RS07035	0.17	-1.0
1,571,225	-		PFLU_RS07035	0.18	-0.9
1,571,225	-		PFLU_RS07035	0.18	+0.4
1,571,225	-		PFLU_RS07035	0.18	+1.7
1,571,225	-		PFLU_RS07035	0.18	-0.3
1,571,225	-		PFLU_RS07035	0.18	+0.5
1,571,267	+		PFLU_RS07035	0.31	+1.1
1,571,267	+		PFLU_RS07035	0.31	-0.3
1,571,267	+		PFLU_RS07035	0.31	-2.0
1,571,267	+		PFLU_RS07035	0.31	-1.8
1,571,267	+		PFLU_RS07035	0.31	-0.8
1,571,267	+		PFLU_RS07035	0.31	-1.6
1,571,267	+		PFLU_RS07035	0.31	-0.7
1,571,267	+		PFLU_RS07035	0.31	+1.2
1,571,268	-		PFLU_RS07035	0.31	-0.4
1,571,268	-		PFLU_RS07035	0.31	+0.1
1,571,276	+		PFLU_RS07035	0.33	-0.3
1,571,276	+		PFLU_RS07035	0.33	-2.4
1,571,276	+		PFLU_RS07035	0.33	+0.8
1,571,276	+		PFLU_RS07035	0.33	+2.4
1,571,277	-		PFLU_RS07035	0.34	+0.1
1,571,277	-		PFLU_RS07035	0.34	-0.5
1,571,331	+		PFLU_RS07035	0.50	-0.1
1,571,343	+		PFLU_RS07035	0.54	+0.6
1,571,343	+		PFLU_RS07035	0.54	-0.0
1,571,343	+		PFLU_RS07035	0.54	+0.7
1,571,343	+		PFLU_RS07035	0.54	-0.9
1,571,344	-		PFLU_RS07035	0.54	-0.7
1,571,344	-		PFLU_RS07035	0.54	-0.1
1,571,344	-		PFLU_RS07035	0.54	-0.2
1,571,344	-		PFLU_RS07035	0.54	+1.3
1,571,344	-		PFLU_RS07035	0.54	+0.9
1,571,344	-		PFLU_RS07035	0.54	+0.6
1,571,417	+		PFLU_RS07035	0.77	-0.1
1,571,418	-		PFLU_RS07035	0.77	-2.5
1,571,426	+		PFLU_RS07035	0.80	+0.5
1,571,435	+		PFLU_RS07035	0.82	+0.4
1,571,452	+		PFLU_RS07035	0.88	-0.1
1,571,452	+		PFLU_RS07035	0.88	+1.9
1,571,535	-				-0.6
1,571,568	+				-2.0
1,571,569	-				-0.1
1,571,653	+		PFLU_RS07040	0.20	+1.6
1,571,653	+		PFLU_RS07040	0.20	+0.9
1,571,653	+		PFLU_RS07040	0.20	-0.9
1,571,653	+		PFLU_RS07040	0.20	-0.7
1,571,653	+		PFLU_RS07040	0.20	+1.5
1,571,653	+		PFLU_RS07040	0.20	+1.3
1,571,653	+		PFLU_RS07040	0.20	-0.9
1,571,653	+		PFLU_RS07040	0.20	+0.7
1,571,653	+		PFLU_RS07040	0.20	+1.1
1,571,653	+		PFLU_RS07040	0.20	-0.0
1,571,653	+		PFLU_RS07040	0.20	+0.8
1,571,653	+		PFLU_RS07040	0.20	+0.2
1,571,654	-		PFLU_RS07040	0.20	+0.0
1,571,654	-		PFLU_RS07040	0.20	-0.7
1,571,719	+		PFLU_RS07040	0.36	+0.3
1,571,719	+		PFLU_RS07040	0.36	-0.6
1,571,742	+		PFLU_RS07040	0.42	+0.5
1,571,764	+		PFLU_RS07040	0.47	-0.5
1,571,765	-		PFLU_RS07040	0.47	+0.7
1,571,784	+		PFLU_RS07040	0.52	-0.3
1,571,784	+		PFLU_RS07040	0.52	+1.3
1,571,784	+		PFLU_RS07040	0.52	-0.0
1,571,784	+		PFLU_RS07040	0.52	-0.2
1,571,784	+		PFLU_RS07040	0.52	+0.1
1,571,784	+		PFLU_RS07040	0.52	+1.0
1,571,784	+		PFLU_RS07040	0.52	+0.8
1,571,784	+		PFLU_RS07040	0.52	-0.3
1,571,784	+		PFLU_RS07040	0.52	+0.4
1,571,784	+		PFLU_RS07040	0.52	-1.8
1,571,784	+		PFLU_RS07040	0.52	+1.7
1,571,784	+		PFLU_RS07040	0.52	+0.4
1,571,784	+		PFLU_RS07040	0.52	+2.7
1,571,784	+		PFLU_RS07040	0.52	-0.5
1,571,784	+		PFLU_RS07040	0.52	+1.7
1,571,784	+		PFLU_RS07040	0.52	+0.7
1,571,785	-		PFLU_RS07040	0.52	+1.5
1,571,785	-		PFLU_RS07040	0.52	+1.7
1,571,785	-		PFLU_RS07040	0.52	-1.1
1,571,785	-		PFLU_RS07040	0.52	-1.3
1,571,785	-		PFLU_RS07040	0.52	-0.9
1,571,785	-		PFLU_RS07040	0.52	-2.1
1,571,785	-		PFLU_RS07040	0.52	-1.1
1,571,785	-		PFLU_RS07040	0.52	-1.3
1,571,785	-		PFLU_RS07040	0.52	-0.3
1,571,785	-		PFLU_RS07040	0.52	-0.3
1,571,785	-		PFLU_RS07040	0.52	+1.3
1,571,785	-		PFLU_RS07040	0.52	+0.8
1,571,785	-		PFLU_RS07040	0.52	+1.7
1,571,928	+		PFLU_RS07040	0.87	+0.3
1,571,928	+		PFLU_RS07040	0.87	-2.9
1,571,974	+				-3.0
1,572,005	+				+0.3
1,572,005	+				-0.8
1,572,005	+				+0.9
1,572,005	+				-0.2
1,572,005	+				-1.0
1,572,006	-				-2.0
1,572,006	-				-0.4
1,572,006	-				+1.8
1,572,006	-				+1.8