Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS05830

Experiment: Trisodium citrate (C); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Trisodium citrate (C); with MOPS
1,310,214	-		PFLU_RS30425	0.84	-0.5
1,310,220	+		PFLU_RS30425	0.85	-0.7
1,310,220	+		PFLU_RS30425	0.85	-1.2
1,310,221	-		PFLU_RS30425	0.85	-2.4
1,310,221	-		PFLU_RS30425	0.85	+0.8
1,310,277	+		PFLU_RS30425	0.88	-1.4
1,310,277	+		PFLU_RS30425	0.88	-0.1
1,310,278	-		PFLU_RS30425	0.88	-0.1
1,310,278	-		PFLU_RS30425	0.88	-0.4
1,310,326	+				-0.1
1,310,528	+				+0.3
1,310,529	-				-1.4
1,310,529	-				-0.2
1,310,591	-				-1.2
1,310,620	+				-0.7
1,310,620	+				+1.5
1,310,621	-				+0.5
1,310,621	-				+0.3
1,310,621	-				+0.5
1,310,621	-				+0.6
1,310,731	+		PFLU_RS30430	0.43	+1.1
1,310,731	+		PFLU_RS30430	0.43	-1.1
1,310,732	-		PFLU_RS30430	0.43	+0.3
1,310,732	-		PFLU_RS30430	0.43	+0.5
1,310,732	-		PFLU_RS30430	0.43	+0.5
1,310,733	+		PFLU_RS30430	0.43	+0.6
1,310,733	+		PFLU_RS30430	0.43	-0.4
1,310,733	+		PFLU_RS30430	0.43	-0.3
1,310,733	+		PFLU_RS30430	0.43	-2.7
1,310,733	+		PFLU_RS30430	0.43	+0.9
1,310,733	+		PFLU_RS30430	0.43	+1.6
1,310,733	+		PFLU_RS30430	0.43	+0.2
1,310,733	+		PFLU_RS30430	0.43	+0.2
1,310,733	+		PFLU_RS30430	0.43	-1.1
1,310,733	+		PFLU_RS30430	0.43	+0.8
1,310,733	+		PFLU_RS30430	0.43	+0.6
1,310,733	+		PFLU_RS30430	0.43	-0.7
1,310,734	-		PFLU_RS30430	0.44	-2.3
1,310,734	-		PFLU_RS30430	0.44	-0.7
1,310,734	-		PFLU_RS30430	0.44	-1.9
1,310,734	-		PFLU_RS30430	0.44	+0.1
1,310,734	-		PFLU_RS30430	0.44	-1.5
1,310,734	-		PFLU_RS30430	0.44	+0.2
1,310,734	-		PFLU_RS30430	0.44	+0.4
1,310,734	-		PFLU_RS30430	0.44	-2.5
1,310,734	-		PFLU_RS30430	0.44	-0.5
1,310,734	-		PFLU_RS30430	0.44	-0.0
1,310,734	-		PFLU_RS30430	0.44	-0.7
1,310,734	-		PFLU_RS30430	0.44	+0.1
1,310,734	-		PFLU_RS30430	0.44	+0.9
1,310,819	+		PFLU_RS30430	0.70	-0.4
1,310,819	+		PFLU_RS30430	0.70	-0.2
1,310,819	+		PFLU_RS30430	0.70	+0.2
1,310,819	+		PFLU_RS30430	0.70	-0.7
1,310,819	+		PFLU_RS30430	0.70	-0.1
1,310,819	+		PFLU_RS30430	0.70	-2.8
1,310,819	+		PFLU_RS30430	0.70	+0.0
1,310,820	-		PFLU_RS30430	0.70	+0.5
1,310,820	-		PFLU_RS30430	0.70	+1.3
1,310,820	-		PFLU_RS30430	0.70	+0.2
1,310,820	-		PFLU_RS30430	0.70	+0.4
1,310,820	-		PFLU_RS30430	0.70	-0.2
1,310,820	-		PFLU_RS30430	0.70	+1.2
1,310,820	-		PFLU_RS30430	0.70	+1.8
1,310,820	-		PFLU_RS30430	0.70	+0.2
1,310,820	-		PFLU_RS30430	0.70	-0.5
1,310,820	-		PFLU_RS30430	0.70	-1.3
1,310,820	-		PFLU_RS30430	0.70	+0.7
1,310,820	-		PFLU_RS30430	0.70	+0.9
1,310,821	+		PFLU_RS30430	0.70	-1.0
1,310,821	+		PFLU_RS30430	0.70	+0.1
1,310,821	+		PFLU_RS30430	0.70	+0.2
1,310,822	-		PFLU_RS30430	0.71	-0.9
1,310,822	-		PFLU_RS30430	0.71	-0.4
1,310,822	-		PFLU_RS30430	0.71	-0.2
1,310,822	-		PFLU_RS30430	0.71	+1.8
1,310,998	+				+1.0
1,310,998	+				+0.8
1,310,998	+				-1.5
1,310,999	-				-0.7
1,311,002	+				+0.3
1,311,002	+				-0.4
1,311,002	+				+0.6
1,311,002	+				+0.1
1,311,002	+				-0.3
1,311,002	+				-1.7
1,311,002	+				-0.7
1,311,003	-				+0.6
1,311,003	-				-1.7
1,311,003	-				+0.5
1,311,003	-				-0.9
1,311,003	-				+0.8
1,311,003	-				-0.4
1,311,003	-				-0.9
1,311,003	-				-0.1
1,311,003	-				+0.3
1,311,003	-				+0.2
1,311,003	-				-0.7
1,311,003	-				+0.3
1,311,003	-				-0.2
1,311,003	-				+0.7
1,311,021	+				-0.4
1,311,022	-				-0.0
1,311,176	+				-0.2
1,311,176	+				+0.8
1,311,176	+				+0.1
1,311,176	+				+1.1
1,311,192	+				-1.7
1,311,193	-				-0.3
1,311,422	+		PFLU_RS05830	0.19	-1.7
1,311,422	+		PFLU_RS05830	0.19	-0.3
1,311,423	-		PFLU_RS05830	0.19	+0.9
1,311,455	+		PFLU_RS05830	0.22	+0.0
1,311,455	+		PFLU_RS05830	0.22	+0.5
1,311,455	+		PFLU_RS05830	0.22	+0.5
1,311,455	+		PFLU_RS05830	0.22	+0.7
1,311,455	+		PFLU_RS05830	0.22	-0.9
1,311,455	+		PFLU_RS05830	0.22	-0.7
1,311,455	+		PFLU_RS05830	0.22	-0.8
1,311,455	+		PFLU_RS05830	0.22	-3.0
1,311,455	+		PFLU_RS05830	0.22	+0.0
1,311,455	+		PFLU_RS05830	0.22	+0.8
1,311,456	-		PFLU_RS05830	0.22	+0.4
1,311,456	-		PFLU_RS05830	0.22	+0.1
1,311,456	-		PFLU_RS05830	0.22	+1.9
1,311,456	-		PFLU_RS05830	0.22	+0.3
1,311,456	-		PFLU_RS05830	0.22	-1.9
1,311,456	-		PFLU_RS05830	0.22	-0.1
1,311,456	-		PFLU_RS05830	0.22	+1.4
1,311,456	-		PFLU_RS05830	0.22	+0.5
1,311,456	-		PFLU_RS05830	0.22	-0.0
1,311,456	-		PFLU_RS05830	0.22	+0.2
1,311,456	-		PFLU_RS05830	0.22	-0.9
1,311,456	-		PFLU_RS05830	0.22	-0.0
1,311,456	-		PFLU_RS05830	0.22	-1.8
1,311,507	+		PFLU_RS05830	0.27	-0.9
1,311,507	+		PFLU_RS05830	0.27	-1.5
1,311,507	+		PFLU_RS05830	0.27	-0.4
1,311,507	+		PFLU_RS05830	0.27	+1.1
1,311,507	+		PFLU_RS05830	0.27	+0.6
1,311,508	-		PFLU_RS05830	0.27	-0.7
1,311,508	-		PFLU_RS05830	0.27	+0.3
1,311,710	+		PFLU_RS05830	0.44	+1.1
1,311,710	+		PFLU_RS05830	0.44	+2.0
1,311,711	-		PFLU_RS05830	0.44	+0.3
1,311,711	-		PFLU_RS05830	0.44	-1.2
1,311,782	+		PFLU_RS05830	0.50	+0.3
1,311,783	-		PFLU_RS05830	0.50	-0.6
1,311,783	-		PFLU_RS05830	0.50	-0.5
1,311,917	+		PFLU_RS05830	0.62	+0.2
1,311,917	+		PFLU_RS05830	0.62	-0.0
1,311,918	-		PFLU_RS05830	0.62	-0.4
1,311,931	+		PFLU_RS05830	0.63	-0.2
1,311,931	+		PFLU_RS05830	0.63	-0.7
1,311,932	-		PFLU_RS05830	0.63	-0.8
1,311,974	+		PFLU_RS05830	0.67	-0.1
1,311,974	+		PFLU_RS05830	0.67	-0.4
1,311,975	-		PFLU_RS05830	0.67	+0.5
1,311,975	-		PFLU_RS05830	0.67	+0.1
1,311,975	-		PFLU_RS05830	0.67	+0.8
1,311,975	-		PFLU_RS05830	0.67	-1.1
1,311,975	-		PFLU_RS05830	0.67	-0.7
1,311,975	-		PFLU_RS05830	0.67	+0.8
1,311,975	-		PFLU_RS05830	0.67	-1.1
1,311,975	-		PFLU_RS05830	0.67	+0.5
1,311,977	+		PFLU_RS05830	0.67	+0.7
1,311,978	-		PFLU_RS05830	0.67	-0.4
1,311,978	-		PFLU_RS05830	0.67	-0.4
1,311,978	-		PFLU_RS05830	0.67	-0.3
1,312,046	+		PFLU_RS05830	0.73	-0.7
1,312,046	+		PFLU_RS05830	0.73	-0.6
1,312,046	+		PFLU_RS05830	0.73	+0.2
1,312,046	+		PFLU_RS05830	0.73	-1.3
1,312,046	+		PFLU_RS05830	0.73	+0.0
1,312,046	+		PFLU_RS05830	0.73	+0.2
1,312,046	+		PFLU_RS05830	0.73	-1.7
1,312,047	-		PFLU_RS05830	0.73	-1.2
1,312,047	-		PFLU_RS05830	0.73	+0.1
1,312,047	-		PFLU_RS05830	0.73	-0.3
1,312,047	-		PFLU_RS05830	0.73	+0.7
1,312,047	-		PFLU_RS05830	0.73	-0.7
1,312,047	-		PFLU_RS05830	0.73	-0.9
1,312,208	+		PFLU_RS05830	0.87	-0.0
1,312,208	+		PFLU_RS05830	0.87	+0.2
1,312,208	+		PFLU_RS05830	0.87	+0.2
1,312,209	-		PFLU_RS05830	0.87	-0.3
1,312,209	-		PFLU_RS05830	0.87	+0.2
1,312,209	-		PFLU_RS05830	0.87	+0.3
1,312,241	+		PFLU_RS05830	0.89	+0.4
1,312,241	+		PFLU_RS05830	0.89	+0.3
1,312,241	+		PFLU_RS05830	0.89	-0.2
1,312,242	-		PFLU_RS05830	0.90	+0.7
1,312,242	-		PFLU_RS05830	0.90	+0.1
1,312,242	-		PFLU_RS05830	0.90	+0.1
1,312,307	+				-0.2
1,312,308	-				-0.1
1,312,308	-				+0.4
1,312,361	+				+0.5
1,312,361	+				-0.4
1,312,362	-				-0.3
1,312,362	-				+0.1
1,312,362	-				+1.3
1,312,362	-				-0.2
1,312,369	-				+0.1
1,312,648	+		PFLU_RS05835	0.56	+0.9
1,312,648	+		PFLU_RS05835	0.56	+0.3
1,312,649	-		PFLU_RS05835	0.56	+0.3
1,312,649	-		PFLU_RS05835	0.56	+0.9
1,312,657	+		PFLU_RS05835	0.58	-2.7
1,312,657	+		PFLU_RS05835	0.58	+1.4
1,312,658	-		PFLU_RS05835	0.58	+0.5
1,312,658	-		PFLU_RS05835	0.58	+0.2
1,312,658	-		PFLU_RS05835	0.58	-2.5
1,312,658	-		PFLU_RS05835	0.58	-0.4
1,312,713	+		PFLU_RS05835	0.69	+0.4
1,312,713	+		PFLU_RS05835	0.69	-2.7
1,312,713	+		PFLU_RS05835	0.69	+2.8
1,312,714	-		PFLU_RS05835	0.69	-1.7
1,312,714	-		PFLU_RS05835	0.69	-0.6
1,312,714	-		PFLU_RS05835	0.69	-0.4
1,312,714	-		PFLU_RS05835	0.69	-0.8
1,312,753	+		PFLU_RS05835	0.77	-0.3
1,312,753	+		PFLU_RS05835	0.77	+0.7
1,312,753	+		PFLU_RS05835	0.77	+0.9
1,312,753	+		PFLU_RS05835	0.77	-0.1
1,312,753	+		PFLU_RS05835	0.77	-0.7
1,312,753	+		PFLU_RS05835	0.77	-1.9
1,312,754	-		PFLU_RS05835	0.77	+0.4
1,312,754	-		PFLU_RS05835	0.77	+0.9
1,312,754	-		PFLU_RS05835	0.77	+1.1
1,312,754	-		PFLU_RS05835	0.77	-0.5
1,312,868	-				-0.1
1,312,899	+				-1.4
1,312,899	+				+0.2
1,312,900	-				-0.6
1,313,012	-		PFLU_RS05840	0.16	-0.4
1,313,012	-		PFLU_RS05840	0.16	-0.1
1,313,015	-		PFLU_RS05840	0.16	-0.6
1,313,137	+		PFLU_RS05840	0.38	-0.2
1,313,137	+		PFLU_RS05840	0.38	+0.6
1,313,137	+		PFLU_RS05840	0.38	-1.1
1,313,138	-		PFLU_RS05840	0.38	-0.0
1,313,138	-		PFLU_RS05840	0.38	+0.5
1,313,138	-		PFLU_RS05840	0.38	-0.2
1,313,155	+		PFLU_RS05840	0.41	-0.4
1,313,155	+		PFLU_RS05840	0.41	-1.2
1,313,156	-		PFLU_RS05840	0.41	+0.4
1,313,156	-		PFLU_RS05840	0.41	-1.1
1,313,156	-		PFLU_RS05840	0.41	+0.2
1,313,159	+		PFLU_RS05840	0.42	+0.6
1,313,159	+		PFLU_RS05840	0.42	+0.8
1,313,159	+		PFLU_RS05840	0.42	+1.3
1,313,160	-		PFLU_RS05840	0.42	-0.7
1,313,160	-		PFLU_RS05840	0.42	-1.1
1,313,160	-		PFLU_RS05840	0.42	+0.5
1,313,265	+		PFLU_RS05840	0.60	-2.0
1,313,265	+		PFLU_RS05840	0.60	-0.6
1,313,266	-		PFLU_RS05840	0.60	-1.7
1,313,266	-		PFLU_RS05840	0.60	-0.6
1,313,266	-		PFLU_RS05840	0.60	+0.7