Experiment: Trisodium citrate (C); with MOPS
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS04930 and PFLU_RS04935 are separated by 88 nucleotides PFLU_RS04935 and PFLU_RS04940 overlap by 4 nucleotides PFLU_RS04940 and PFLU_RS04945 are separated by 2 nucleotides PFLU_RS04945 and PFLU_RS04950 are separated by 147 nucleotides
PFLU_RS04930: PFLU_RS04930 - PhoH family protein, at 1,105,069 to 1,106,463
_RS04930
PFLU_RS04935: PFLU_RS04935 - cyclic pyranopterin monophosphate synthase MoaC, at 1,106,552 to 1,107,025
_RS04935
PFLU_RS04940: PFLU_RS04940 - molybdopterin converting factor subunit 1, at 1,107,022 to 1,107,264
_RS04940
PFLU_RS04945: PFLU_RS04945 - molybdopterin synthase catalytic subunit MoaE, at 1,107,267 to 1,107,716
_RS04945
PFLU_RS04950: PFLU_RS04950 - ATP-dependent RNA helicase RhlB, at 1,107,864 to 1,109,333
_RS04950
Position (kb) 1106
1107
1108 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 1105.595 kb on - strand, within PFLU_RS04930 at 1105.707 kb on + strand, within PFLU_RS04930 at 1105.707 kb on + strand, within PFLU_RS04930 at 1105.708 kb on - strand, within PFLU_RS04930 at 1105.708 kb on - strand, within PFLU_RS04930 at 1105.708 kb on - strand, within PFLU_RS04930 at 1105.842 kb on + strand, within PFLU_RS04930 at 1105.843 kb on - strand, within PFLU_RS04930 at 1105.846 kb on + strand, within PFLU_RS04930 at 1105.846 kb on + strand, within PFLU_RS04930 at 1105.864 kb on + strand, within PFLU_RS04930 at 1105.864 kb on + strand, within PFLU_RS04930 at 1105.864 kb on + strand, within PFLU_RS04930 at 1105.864 kb on + strand, within PFLU_RS04930 at 1105.864 kb on + strand, within PFLU_RS04930 at 1105.865 kb on - strand, within PFLU_RS04930 at 1106.140 kb on + strand, within PFLU_RS04930 at 1106.140 kb on + strand, within PFLU_RS04930 at 1106.140 kb on + strand, within PFLU_RS04930 at 1106.140 kb on + strand, within PFLU_RS04930 at 1106.140 kb on + strand, within PFLU_RS04930 at 1106.140 kb on + strand, within PFLU_RS04930 at 1106.140 kb on + strand, within PFLU_RS04930 at 1106.140 kb on + strand, within PFLU_RS04930 at 1106.140 kb on + strand, within PFLU_RS04930 at 1106.140 kb on + strand, within PFLU_RS04930 at 1106.141 kb on - strand, within PFLU_RS04930 at 1106.141 kb on - strand, within PFLU_RS04930 at 1106.141 kb on - strand, within PFLU_RS04930 at 1106.141 kb on - strand, within PFLU_RS04930 at 1106.141 kb on - strand, within PFLU_RS04930 at 1106.141 kb on - strand, within PFLU_RS04930 at 1106.141 kb on - strand, within PFLU_RS04930 at 1106.141 kb on - strand, within PFLU_RS04930 at 1106.141 kb on - strand, within PFLU_RS04930 at 1106.141 kb on - strand, within PFLU_RS04930 at 1106.141 kb on - strand, within PFLU_RS04930 at 1106.141 kb on - strand, within PFLU_RS04930 at 1106.141 kb on - strand, within PFLU_RS04930 at 1106.141 kb on - strand, within PFLU_RS04930 at 1106.182 kb on + strand, within PFLU_RS04930 at 1106.182 kb on + strand, within PFLU_RS04930 at 1106.182 kb on + strand, within PFLU_RS04930 at 1106.182 kb on + strand, within PFLU_RS04930 at 1106.182 kb on + strand, within PFLU_RS04930 at 1106.182 kb on + strand, within PFLU_RS04930 at 1106.182 kb on + strand, within PFLU_RS04930 at 1106.182 kb on + strand, within PFLU_RS04930 at 1106.182 kb on + strand, within PFLU_RS04930 at 1106.182 kb on + strand, within PFLU_RS04930 at 1106.183 kb on - strand, within PFLU_RS04930 at 1106.183 kb on - strand, within PFLU_RS04930 at 1106.183 kb on - strand, within PFLU_RS04930 at 1106.183 kb on - strand, within PFLU_RS04930 at 1106.183 kb on - strand, within PFLU_RS04930 at 1106.183 kb on - strand, within PFLU_RS04930 at 1106.183 kb on - strand, within PFLU_RS04930 at 1106.183 kb on - strand, within PFLU_RS04930 at 1106.183 kb on - strand, within PFLU_RS04930 at 1106.183 kb on - strand, within PFLU_RS04930 at 1106.183 kb on - strand, within PFLU_RS04930 at 1106.183 kb on - strand, within PFLU_RS04930 at 1106.183 kb on - strand, within PFLU_RS04930 at 1106.332 kb on + strand at 1106.332 kb on + strand at 1106.332 kb on + strand at 1106.332 kb on + strand at 1106.332 kb on + strand at 1106.332 kb on + strand at 1106.333 kb on - strand at 1106.333 kb on - strand at 1106.362 kb on + strand at 1106.362 kb on + strand at 1106.363 kb on - strand at 1106.363 kb on - strand at 1106.363 kb on - strand at 1106.363 kb on - strand at 1106.363 kb on - strand at 1106.444 kb on - strand at 1106.461 kb on + strand at 1106.461 kb on + strand at 1106.461 kb on + strand at 1106.461 kb on + strand at 1106.462 kb on - strand at 1106.462 kb on - strand at 1106.462 kb on - strand at 1106.462 kb on - strand at 1106.462 kb on - strand at 1106.462 kb on - strand at 1106.466 kb on - strand at 1106.514 kb on + strand at 1106.514 kb on + strand at 1106.520 kb on + strand at 1106.520 kb on + strand at 1106.520 kb on + strand at 1106.520 kb on + strand at 1106.520 kb on + strand at 1106.520 kb on + strand at 1106.521 kb on - strand at 1106.521 kb on - strand at 1106.521 kb on - strand at 1106.521 kb on - strand at 1106.545 kb on + strand at 1106.546 kb on - strand at 1106.546 kb on - strand at 1106.921 kb on + strand, within PFLU_RS04935 at 1106.922 kb on - strand, within PFLU_RS04935 at 1106.922 kb on - strand, within PFLU_RS04935 at 1106.922 kb on - strand, within PFLU_RS04935 at 1106.922 kb on - strand, within PFLU_RS04935 at 1106.922 kb on - strand, within PFLU_RS04935 at 1106.922 kb on - strand, within PFLU_RS04935 at 1106.940 kb on + strand, within PFLU_RS04935 at 1106.940 kb on + strand, within PFLU_RS04935 at 1106.940 kb on + strand, within PFLU_RS04935 at 1106.940 kb on + strand, within PFLU_RS04935 at 1106.941 kb on - strand, within PFLU_RS04935 at 1106.941 kb on - strand, within PFLU_RS04935 at 1106.966 kb on - strand, within PFLU_RS04935 at 1107.035 kb on + strand at 1107.035 kb on + strand at 1107.035 kb on + strand at 1107.036 kb on - strand at 1107.036 kb on - strand at 1107.036 kb on - strand at 1107.036 kb on - strand at 1107.036 kb on - strand at 1107.036 kb on - strand at 1107.036 kb on - strand at 1107.036 kb on - strand at 1107.036 kb on - strand at 1107.052 kb on + strand, within PFLU_RS04940 at 1107.369 kb on + strand, within PFLU_RS04945 at 1107.370 kb on - strand, within PFLU_RS04945 at 1107.370 kb on - strand, within PFLU_RS04945 at 1107.370 kb on - strand, within PFLU_RS04945 at 1107.609 kb on + strand, within PFLU_RS04945 at 1107.609 kb on + strand, within PFLU_RS04945 at 1107.610 kb on - strand, within PFLU_RS04945 at 1107.610 kb on - strand, within PFLU_RS04945 at 1107.610 kb on - strand, within PFLU_RS04945 at 1107.714 kb on + strand at 1107.715 kb on - strand at 1107.715 kb on - strand at 1107.730 kb on + strand at 1107.730 kb on + strand at 1107.730 kb on + strand at 1107.730 kb on + strand at 1107.731 kb on - strand at 1107.779 kb on - strand at 1107.813 kb on - strand at 1107.813 kb on - strand at 1107.813 kb on - strand at 1107.813 kb on - strand at 1107.813 kb on - strand at 1107.865 kb on + strand at 1107.865 kb on + strand at 1107.865 kb on + strand at 1107.895 kb on - strand at 1107.895 kb on - strand at 1107.895 kb on - strand at 1107.961 kb on + strand at 1108.020 kb on - strand, within PFLU_RS04950
Per-strain Table
Position Strand Gene LocusTag Fraction Trisodium citrate (C); with MOPS remove 1,105,595 - PFLU_RS04930 0.38 -2.0 1,105,707 + PFLU_RS04930 0.46 -0.1 1,105,707 + PFLU_RS04930 0.46 +0.4 1,105,708 - PFLU_RS04930 0.46 -0.1 1,105,708 - PFLU_RS04930 0.46 -2.0 1,105,708 - PFLU_RS04930 0.46 +0.7 1,105,842 + PFLU_RS04930 0.55 -0.4 1,105,843 - PFLU_RS04930 0.55 -1.3 1,105,846 + PFLU_RS04930 0.56 -0.0 1,105,846 + PFLU_RS04930 0.56 -0.1 1,105,864 + PFLU_RS04930 0.57 -0.8 1,105,864 + PFLU_RS04930 0.57 +0.2 1,105,864 + PFLU_RS04930 0.57 -0.8 1,105,864 + PFLU_RS04930 0.57 -0.5 1,105,864 + PFLU_RS04930 0.57 -0.0 1,105,865 - PFLU_RS04930 0.57 -2.5 1,106,140 + PFLU_RS04930 0.77 +1.9 1,106,140 + PFLU_RS04930 0.77 -0.8 1,106,140 + PFLU_RS04930 0.77 +0.1 1,106,140 + PFLU_RS04930 0.77 -0.0 1,106,140 + PFLU_RS04930 0.77 +0.5 1,106,140 + PFLU_RS04930 0.77 -1.0 1,106,140 + PFLU_RS04930 0.77 -0.3 1,106,140 + PFLU_RS04930 0.77 -1.5 1,106,140 + PFLU_RS04930 0.77 -1.1 1,106,140 + PFLU_RS04930 0.77 -2.4 1,106,141 - PFLU_RS04930 0.77 -1.3 1,106,141 - PFLU_RS04930 0.77 -0.9 1,106,141 - PFLU_RS04930 0.77 -1.6 1,106,141 - PFLU_RS04930 0.77 -1.1 1,106,141 - PFLU_RS04930 0.77 +0.3 1,106,141 - PFLU_RS04930 0.77 +0.9 1,106,141 - PFLU_RS04930 0.77 -0.6 1,106,141 - PFLU_RS04930 0.77 -0.5 1,106,141 - PFLU_RS04930 0.77 +0.0 1,106,141 - PFLU_RS04930 0.77 -1.0 1,106,141 - PFLU_RS04930 0.77 +0.6 1,106,141 - PFLU_RS04930 0.77 -0.1 1,106,141 - PFLU_RS04930 0.77 +0.3 1,106,141 - PFLU_RS04930 0.77 -0.5 1,106,182 + PFLU_RS04930 0.80 -0.5 1,106,182 + PFLU_RS04930 0.80 -0.1 1,106,182 + PFLU_RS04930 0.80 -2.5 1,106,182 + PFLU_RS04930 0.80 -0.1 1,106,182 + PFLU_RS04930 0.80 -2.3 1,106,182 + PFLU_RS04930 0.80 +0.9 1,106,182 + PFLU_RS04930 0.80 +0.5 1,106,182 + PFLU_RS04930 0.80 -2.1 1,106,182 + PFLU_RS04930 0.80 -1.0 1,106,182 + PFLU_RS04930 0.80 -2.2 1,106,183 - PFLU_RS04930 0.80 -0.5 1,106,183 - PFLU_RS04930 0.80 +0.1 1,106,183 - PFLU_RS04930 0.80 -0.5 1,106,183 - PFLU_RS04930 0.80 +2.9 1,106,183 - PFLU_RS04930 0.80 +0.1 1,106,183 - PFLU_RS04930 0.80 +2.0 1,106,183 - PFLU_RS04930 0.80 +1.3 1,106,183 - PFLU_RS04930 0.80 -0.3 1,106,183 - PFLU_RS04930 0.80 -0.2 1,106,183 - PFLU_RS04930 0.80 -0.1 1,106,183 - PFLU_RS04930 0.80 +0.2 1,106,183 - PFLU_RS04930 0.80 -0.7 1,106,183 - PFLU_RS04930 0.80 -0.2 1,106,332 + +0.3 1,106,332 + +0.9 1,106,332 + -0.1 1,106,332 + -0.2 1,106,332 + -0.7 1,106,332 + +0.3 1,106,333 - -1.1 1,106,333 - -0.3 1,106,362 + +0.2 1,106,362 + -0.0 1,106,363 - -1.7 1,106,363 - +0.0 1,106,363 - -1.4 1,106,363 - -0.7 1,106,363 - +0.5 1,106,444 - -0.8 1,106,461 + -3.0 1,106,461 + +0.4 1,106,461 + +1.0 1,106,461 + -2.5 1,106,462 - -1.1 1,106,462 - +0.4 1,106,462 - +0.1 1,106,462 - -0.3 1,106,462 - +1.6 1,106,462 - -2.4 1,106,466 - +0.3 1,106,514 + -0.5 1,106,514 + -0.7 1,106,520 + +0.9 1,106,520 + +0.2 1,106,520 + +0.1 1,106,520 + -1.3 1,106,520 + +0.1 1,106,520 + +1.0 1,106,521 - -0.5 1,106,521 - +0.4 1,106,521 - -0.3 1,106,521 - +0.6 1,106,545 + -0.1 1,106,546 - -0.1 1,106,546 - +0.2 1,106,921 + PFLU_RS04935 0.78 +0.6 1,106,922 - PFLU_RS04935 0.78 -1.6 1,106,922 - PFLU_RS04935 0.78 -0.3 1,106,922 - PFLU_RS04935 0.78 +0.0 1,106,922 - PFLU_RS04935 0.78 +1.5 1,106,922 - PFLU_RS04935 0.78 -0.7 1,106,922 - PFLU_RS04935 0.78 -2.4 1,106,940 + PFLU_RS04935 0.82 -1.3 1,106,940 + PFLU_RS04935 0.82 -1.1 1,106,940 + PFLU_RS04935 0.82 -0.8 1,106,940 + PFLU_RS04935 0.82 +0.3 1,106,941 - PFLU_RS04935 0.82 -0.7 1,106,941 - PFLU_RS04935 0.82 +0.6 1,106,966 - PFLU_RS04935 0.87 -0.5 1,107,035 + -1.1 1,107,035 + +1.5 1,107,035 + -0.2 1,107,036 - +1.3 1,107,036 - -0.8 1,107,036 - -1.3 1,107,036 - +0.1 1,107,036 - +1.4 1,107,036 - -0.3 1,107,036 - +1.3 1,107,036 - -0.2 1,107,036 - +0.5 1,107,052 + PFLU_RS04940 0.12 -1.1 1,107,369 + PFLU_RS04945 0.23 +1.9 1,107,370 - PFLU_RS04945 0.23 -2.5 1,107,370 - PFLU_RS04945 0.23 -0.4 1,107,370 - PFLU_RS04945 0.23 +1.1 1,107,609 + PFLU_RS04945 0.76 -0.1 1,107,609 + PFLU_RS04945 0.76 -0.3 1,107,610 - PFLU_RS04945 0.76 -0.1 1,107,610 - PFLU_RS04945 0.76 +0.5 1,107,610 - PFLU_RS04945 0.76 -1.1 1,107,714 + +0.2 1,107,715 - +0.4 1,107,715 - -1.5 1,107,730 + +0.5 1,107,730 + -0.7 1,107,730 + +0.6 1,107,730 + -0.6 1,107,731 - -0.1 1,107,779 - -0.7 1,107,813 - -0.1 1,107,813 - +0.3 1,107,813 - -1.5 1,107,813 - -0.1 1,107,813 - +0.7 1,107,865 + -2.0 1,107,865 + +0.4 1,107,865 + -1.4 1,107,895 - +0.3 1,107,895 - +0.4 1,107,895 - -3.1 1,107,961 + +0.4 1,108,020 - PFLU_RS04950 0.11 +0.0
Or see this region's nucleotide sequence