Experiment: acetate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_26930 and PS417_26935 are separated by 54 nucleotides PS417_26935 and PS417_26940 are separated by 22 nucleotides
PS417_26930: PS417_26930 - FAD-dependent oxidoreductase, at 5,815,254 to 5,816,387
_26930
PS417_26935: PS417_26935 - phosphonate ABC transporter substrate-binding protein, at 5,816,442 to 5,817,455
_26935
PS417_26940: PS417_26940 - phosphonate ABC transporter permease, at 5,817,478 to 5,819,190
_26940
Position (kb) 5816
5817
5818 Strain fitness (log2 ratio) -1
0
1 at 5815.511 kb on - strand, within PS417_26930 at 5815.528 kb on - strand, within PS417_26930 at 5815.885 kb on + strand, within PS417_26930 at 5815.885 kb on + strand, within PS417_26930 at 5815.885 kb on + strand, within PS417_26930 at 5815.885 kb on + strand, within PS417_26930 at 5815.886 kb on - strand, within PS417_26930 at 5815.915 kb on + strand, within PS417_26930 at 5816.008 kb on + strand, within PS417_26930 at 5816.050 kb on + strand, within PS417_26930 at 5816.126 kb on - strand, within PS417_26930 at 5816.360 kb on + strand at 5816.367 kb on + strand at 5816.368 kb on - strand at 5816.368 kb on - strand at 5816.368 kb on - strand at 5816.431 kb on - strand at 5816.617 kb on + strand, within PS417_26935 at 5816.618 kb on - strand, within PS417_26935 at 5816.890 kb on + strand, within PS417_26935 at 5816.890 kb on + strand, within PS417_26935 at 5816.891 kb on - strand, within PS417_26935 at 5816.891 kb on - strand, within PS417_26935 at 5816.891 kb on - strand, within PS417_26935 at 5817.163 kb on + strand, within PS417_26935 at 5817.163 kb on + strand, within PS417_26935 at 5817.373 kb on + strand at 5817.374 kb on - strand at 5817.668 kb on + strand, within PS417_26940 at 5817.717 kb on - strand, within PS417_26940 at 5817.780 kb on - strand, within PS417_26940 at 5817.959 kb on + strand, within PS417_26940 at 5817.959 kb on + strand, within PS417_26940 at 5817.960 kb on - strand, within PS417_26940 at 5818.283 kb on + strand, within PS417_26940 at 5818.283 kb on + strand, within PS417_26940
Per-strain Table
Position Strand Gene LocusTag Fraction acetate (C) remove 5,815,511 - PS417_26930 0.23 +0.0 5,815,528 - PS417_26930 0.24 +0.5 5,815,885 + PS417_26930 0.56 -0.4 5,815,885 + PS417_26930 0.56 +0.5 5,815,885 + PS417_26930 0.56 -0.1 5,815,885 + PS417_26930 0.56 -0.4 5,815,886 - PS417_26930 0.56 -1.0 5,815,915 + PS417_26930 0.58 -0.4 5,816,008 + PS417_26930 0.66 +0.2 5,816,050 + PS417_26930 0.70 -0.3 5,816,126 - PS417_26930 0.77 +0.0 5,816,360 + +0.1 5,816,367 + -0.5 5,816,368 - -0.7 5,816,368 - -0.1 5,816,368 - -0.4 5,816,431 - -0.3 5,816,617 + PS417_26935 0.17 +0.4 5,816,618 - PS417_26935 0.17 +0.0 5,816,890 + PS417_26935 0.44 -0.1 5,816,890 + PS417_26935 0.44 +0.1 5,816,891 - PS417_26935 0.44 -0.2 5,816,891 - PS417_26935 0.44 +0.6 5,816,891 - PS417_26935 0.44 +0.1 5,817,163 + PS417_26935 0.71 +0.2 5,817,163 + PS417_26935 0.71 -0.2 5,817,373 + +1.6 5,817,374 - -0.1 5,817,668 + PS417_26940 0.11 -0.5 5,817,717 - PS417_26940 0.14 -0.2 5,817,780 - PS417_26940 0.18 +0.1 5,817,959 + PS417_26940 0.28 +0.4 5,817,959 + PS417_26940 0.28 -0.4 5,817,960 - PS417_26940 0.28 -0.1 5,818,283 + PS417_26940 0.47 +0.2 5,818,283 + PS417_26940 0.47 +0.3
Or see this region's nucleotide sequence