Experiment: m.b. Thallium(I) acetate 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_4112 and Echvi_4113 are separated by 10 nucleotides Echvi_4113 and Echvi_4114 are separated by 2 nucleotides Echvi_4114 and Echvi_4115 are separated by 7 nucleotides Echvi_4115 and Echvi_4116 are separated by 173 nucleotides
Echvi_4112: Echvi_4112 - Fe2+/Zn2+ uptake regulation proteins, at 4,926,531 to 4,926,959
_4112
Echvi_4113: Echvi_4113 - hypothetical protein, at 4,926,970 to 4,927,439
_4113
Echvi_4114: Echvi_4114 - hypothetical protein, at 4,927,442 to 4,927,678
_4114
Echvi_4115: Echvi_4115 - Nitrogen regulatory protein PII, at 4,927,686 to 4,928,027
_4115
Echvi_4116: Echvi_4116 - RND family efflux transporter, MFP subunit, at 4,928,201 to 4,929,433
_4116
Position (kb)
4927
4928
4929 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 4926.693 kb on + strand, within Echvi_4112 at 4926.693 kb on + strand, within Echvi_4112 at 4926.705 kb on - strand, within Echvi_4112 at 4926.727 kb on + strand, within Echvi_4112 at 4926.727 kb on + strand, within Echvi_4112 at 4926.727 kb on + strand, within Echvi_4112 at 4926.753 kb on + strand, within Echvi_4112 at 4926.754 kb on - strand, within Echvi_4112 at 4926.754 kb on - strand, within Echvi_4112 at 4926.755 kb on + strand, within Echvi_4112 at 4926.755 kb on + strand, within Echvi_4112 at 4926.755 kb on + strand, within Echvi_4112 at 4926.756 kb on - strand, within Echvi_4112 at 4926.762 kb on + strand, within Echvi_4112 at 4926.763 kb on - strand, within Echvi_4112 at 4926.763 kb on - strand, within Echvi_4112 at 4926.789 kb on + strand, within Echvi_4112 at 4926.799 kb on + strand, within Echvi_4112 at 4926.800 kb on - strand, within Echvi_4112 at 4926.822 kb on + strand, within Echvi_4112 at 4926.823 kb on - strand, within Echvi_4112 at 4926.836 kb on - strand, within Echvi_4112 at 4926.924 kb on + strand at 4926.972 kb on + strand at 4926.976 kb on + strand at 4926.976 kb on + strand at 4926.979 kb on + strand at 4926.979 kb on + strand at 4926.979 kb on + strand at 4926.979 kb on + strand at 4926.980 kb on - strand at 4926.980 kb on - strand at 4926.980 kb on - strand at 4927.000 kb on + strand at 4927.001 kb on - strand at 4927.011 kb on + strand at 4927.011 kb on + strand at 4927.012 kb on - strand at 4927.181 kb on + strand, within Echvi_4113 at 4927.200 kb on + strand, within Echvi_4113 at 4927.276 kb on + strand, within Echvi_4113 at 4927.344 kb on + strand, within Echvi_4113 at 4927.345 kb on - strand, within Echvi_4113 at 4927.350 kb on - strand, within Echvi_4113 at 4927.361 kb on + strand, within Echvi_4113 at 4927.391 kb on + strand, within Echvi_4113 at 4927.391 kb on + strand, within Echvi_4113 at 4927.391 kb on + strand, within Echvi_4113 at 4927.392 kb on - strand, within Echvi_4113 at 4927.440 kb on + strand at 4927.470 kb on + strand, within Echvi_4114 at 4927.470 kb on + strand, within Echvi_4114 at 4927.487 kb on + strand, within Echvi_4114 at 4927.489 kb on + strand, within Echvi_4114 at 4927.520 kb on + strand, within Echvi_4114 at 4927.607 kb on + strand, within Echvi_4114 at 4927.607 kb on + strand, within Echvi_4114 at 4927.611 kb on + strand, within Echvi_4114 at 4927.653 kb on + strand, within Echvi_4114 at 4927.654 kb on - strand, within Echvi_4114 at 4927.658 kb on + strand at 4927.659 kb on - strand at 4927.659 kb on - strand at 4927.679 kb on - strand at 4927.706 kb on + strand at 4927.752 kb on + strand, within Echvi_4115 at 4927.753 kb on - strand, within Echvi_4115 at 4927.756 kb on + strand, within Echvi_4115 at 4927.756 kb on + strand, within Echvi_4115 at 4927.757 kb on - strand, within Echvi_4115 at 4927.757 kb on - strand, within Echvi_4115 at 4927.757 kb on - strand, within Echvi_4115 at 4927.760 kb on + strand, within Echvi_4115 at 4927.793 kb on + strand, within Echvi_4115 at 4927.794 kb on - strand, within Echvi_4115 at 4927.815 kb on + strand, within Echvi_4115 at 4927.816 kb on - strand, within Echvi_4115 at 4927.816 kb on - strand, within Echvi_4115 at 4927.816 kb on - strand, within Echvi_4115 at 4927.816 kb on - strand, within Echvi_4115 at 4927.816 kb on - strand, within Echvi_4115 at 4928.032 kb on - strand at 4928.033 kb on + strand at 4928.039 kb on + strand at 4928.039 kb on + strand at 4928.093 kb on - strand at 4928.093 kb on - strand at 4928.094 kb on + strand at 4928.098 kb on + strand at 4928.099 kb on - strand at 4928.113 kb on + strand at 4928.114 kb on - strand at 4928.153 kb on + strand at 4928.153 kb on + strand at 4928.181 kb on - strand at 4928.195 kb on + strand at 4928.195 kb on + strand at 4928.195 kb on + strand at 4928.210 kb on - strand at 4928.210 kb on - strand at 4928.247 kb on + strand at 4928.248 kb on - strand at 4928.250 kb on + strand at 4928.251 kb on - strand at 4928.251 kb on - strand at 4928.251 kb on - strand at 4928.251 kb on - strand at 4928.340 kb on - strand, within Echvi_4116 at 4928.397 kb on - strand, within Echvi_4116 at 4928.404 kb on + strand, within Echvi_4116 at 4928.405 kb on - strand, within Echvi_4116 at 4928.490 kb on + strand, within Echvi_4116 at 4928.490 kb on + strand, within Echvi_4116 at 4928.504 kb on + strand, within Echvi_4116 at 4928.518 kb on + strand, within Echvi_4116 at 4928.519 kb on - strand, within Echvi_4116 at 4928.538 kb on - strand, within Echvi_4116 at 4928.538 kb on - strand, within Echvi_4116 at 4928.584 kb on - strand, within Echvi_4116 at 4928.597 kb on + strand, within Echvi_4116 at 4928.598 kb on - strand, within Echvi_4116 at 4928.651 kb on - strand, within Echvi_4116 at 4928.676 kb on - strand, within Echvi_4116 at 4928.693 kb on + strand, within Echvi_4116 at 4928.693 kb on + strand, within Echvi_4116 at 4928.693 kb on + strand, within Echvi_4116 at 4928.694 kb on - strand, within Echvi_4116 at 4928.694 kb on - strand, within Echvi_4116 at 4928.694 kb on - strand, within Echvi_4116 at 4928.695 kb on + strand, within Echvi_4116 at 4928.695 kb on + strand, within Echvi_4116 at 4928.695 kb on + strand, within Echvi_4116 at 4928.695 kb on + strand, within Echvi_4116 at 4928.696 kb on - strand, within Echvi_4116 at 4928.762 kb on + strand, within Echvi_4116 at 4928.776 kb on - strand, within Echvi_4116 at 4928.801 kb on + strand, within Echvi_4116 at 4928.801 kb on + strand, within Echvi_4116 at 4928.801 kb on + strand, within Echvi_4116 at 4928.801 kb on + strand, within Echvi_4116 at 4928.802 kb on - strand, within Echvi_4116 at 4928.802 kb on - strand, within Echvi_4116 at 4928.805 kb on + strand, within Echvi_4116 at 4928.806 kb on - strand, within Echvi_4116 at 4928.806 kb on - strand, within Echvi_4116 at 4928.806 kb on - strand, within Echvi_4116 at 4928.806 kb on - strand, within Echvi_4116 at 4928.806 kb on - strand, within Echvi_4116 at 4928.922 kb on + strand, within Echvi_4116 at 4928.930 kb on - strand, within Echvi_4116 at 4928.952 kb on + strand, within Echvi_4116 at 4928.953 kb on - strand, within Echvi_4116 at 4928.953 kb on - strand, within Echvi_4116 at 4928.988 kb on + strand, within Echvi_4116 at 4928.993 kb on + strand, within Echvi_4116 at 4929.019 kb on + strand, within Echvi_4116 at 4929.019 kb on + strand, within Echvi_4116 at 4929.019 kb on + strand, within Echvi_4116 at 4929.026 kb on + strand, within Echvi_4116
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.05 mg/ml remove 4,926,693 + Echvi_4112 0.38 -0.9 4,926,693 + Echvi_4112 0.38 +0.1 4,926,705 - Echvi_4112 0.41 -0.6 4,926,727 + Echvi_4112 0.46 -0.1 4,926,727 + Echvi_4112 0.46 +0.2 4,926,727 + Echvi_4112 0.46 -1.5 4,926,753 + Echvi_4112 0.52 -0.0 4,926,754 - Echvi_4112 0.52 -3.1 4,926,754 - Echvi_4112 0.52 -3.0 4,926,755 + Echvi_4112 0.52 +0.8 4,926,755 + Echvi_4112 0.52 -0.3 4,926,755 + Echvi_4112 0.52 +0.2 4,926,756 - Echvi_4112 0.52 +0.0 4,926,762 + Echvi_4112 0.54 -0.2 4,926,763 - Echvi_4112 0.54 -0.3 4,926,763 - Echvi_4112 0.54 -1.6 4,926,789 + Echvi_4112 0.60 -0.7 4,926,799 + Echvi_4112 0.62 +1.8 4,926,800 - Echvi_4112 0.63 -0.3 4,926,822 + Echvi_4112 0.68 +0.2 4,926,823 - Echvi_4112 0.68 -2.5 4,926,836 - Echvi_4112 0.71 -0.6 4,926,924 + +0.4 4,926,972 + -0.9 4,926,976 + -2.1 4,926,976 + +0.2 4,926,979 + +1.0 4,926,979 + +0.5 4,926,979 + +0.2 4,926,979 + -1.9 4,926,980 - -1.8 4,926,980 - -0.2 4,926,980 - -0.5 4,927,000 + -0.4 4,927,001 - -2.0 4,927,011 + +0.2 4,927,011 + +0.5 4,927,012 - -0.4 4,927,181 + Echvi_4113 0.45 -1.0 4,927,200 + Echvi_4113 0.49 +0.2 4,927,276 + Echvi_4113 0.65 -0.4 4,927,344 + Echvi_4113 0.80 -1.2 4,927,345 - Echvi_4113 0.80 -1.6 4,927,350 - Echvi_4113 0.81 -1.2 4,927,361 + Echvi_4113 0.83 -0.6 4,927,391 + Echvi_4113 0.90 +2.1 4,927,391 + Echvi_4113 0.90 +0.5 4,927,391 + Echvi_4113 0.90 -0.2 4,927,392 - Echvi_4113 0.90 -1.0 4,927,440 + +0.7 4,927,470 + Echvi_4114 0.12 +0.8 4,927,470 + Echvi_4114 0.12 -0.7 4,927,487 + Echvi_4114 0.19 +1.0 4,927,489 + Echvi_4114 0.20 +0.7 4,927,520 + Echvi_4114 0.33 +0.6 4,927,607 + Echvi_4114 0.70 +0.1 4,927,607 + Echvi_4114 0.70 -0.4 4,927,611 + Echvi_4114 0.71 -0.5 4,927,653 + Echvi_4114 0.89 -0.7 4,927,654 - Echvi_4114 0.89 +0.6 4,927,658 + +0.6 4,927,659 - +0.0 4,927,659 - -1.8 4,927,679 - -0.8 4,927,706 + +2.8 4,927,752 + Echvi_4115 0.19 +0.6 4,927,753 - Echvi_4115 0.20 -1.2 4,927,756 + Echvi_4115 0.20 -1.2 4,927,756 + Echvi_4115 0.20 -1.7 4,927,757 - Echvi_4115 0.21 -3.4 4,927,757 - Echvi_4115 0.21 +0.1 4,927,757 - Echvi_4115 0.21 -0.8 4,927,760 + Echvi_4115 0.22 -0.6 4,927,793 + Echvi_4115 0.31 +0.3 4,927,794 - Echvi_4115 0.32 -1.9 4,927,815 + Echvi_4115 0.38 -0.6 4,927,816 - Echvi_4115 0.38 -0.7 4,927,816 - Echvi_4115 0.38 +1.5 4,927,816 - Echvi_4115 0.38 -1.2 4,927,816 - Echvi_4115 0.38 -0.3 4,927,816 - Echvi_4115 0.38 -1.5 4,928,032 - -1.0 4,928,033 + +0.2 4,928,039 + -0.3 4,928,039 + -0.5 4,928,093 - -2.2 4,928,093 - -0.7 4,928,094 + +0.8 4,928,098 + -0.3 4,928,099 - -1.2 4,928,113 + -1.9 4,928,114 - +1.0 4,928,153 + -0.2 4,928,153 + +0.3 4,928,181 - -1.0 4,928,195 + +0.9 4,928,195 + +0.1 4,928,195 + +1.2 4,928,210 - -2.2 4,928,210 - -0.8 4,928,247 + -0.7 4,928,248 - +0.0 4,928,250 + +0.6 4,928,251 - -1.8 4,928,251 - -0.8 4,928,251 - -0.2 4,928,251 - -0.6 4,928,340 - Echvi_4116 0.11 -1.3 4,928,397 - Echvi_4116 0.16 +0.4 4,928,404 + Echvi_4116 0.16 -0.3 4,928,405 - Echvi_4116 0.17 -1.1 4,928,490 + Echvi_4116 0.23 +0.8 4,928,490 + Echvi_4116 0.23 -1.1 4,928,504 + Echvi_4116 0.25 -0.1 4,928,518 + Echvi_4116 0.26 +1.0 4,928,519 - Echvi_4116 0.26 -0.6 4,928,538 - Echvi_4116 0.27 -0.5 4,928,538 - Echvi_4116 0.27 -1.1 4,928,584 - Echvi_4116 0.31 -1.3 4,928,597 + Echvi_4116 0.32 -1.3 4,928,598 - Echvi_4116 0.32 +1.2 4,928,651 - Echvi_4116 0.36 -1.8 4,928,676 - Echvi_4116 0.39 -0.8 4,928,693 + Echvi_4116 0.40 -1.4 4,928,693 + Echvi_4116 0.40 +0.1 4,928,693 + Echvi_4116 0.40 +1.0 4,928,694 - Echvi_4116 0.40 -0.8 4,928,694 - Echvi_4116 0.40 -0.5 4,928,694 - Echvi_4116 0.40 +0.4 4,928,695 + Echvi_4116 0.40 -0.4 4,928,695 + Echvi_4116 0.40 -0.3 4,928,695 + Echvi_4116 0.40 +0.2 4,928,695 + Echvi_4116 0.40 -1.3 4,928,696 - Echvi_4116 0.40 +0.7 4,928,762 + Echvi_4116 0.45 -0.3 4,928,776 - Echvi_4116 0.47 -1.2 4,928,801 + Echvi_4116 0.49 +0.5 4,928,801 + Echvi_4116 0.49 +0.2 4,928,801 + Echvi_4116 0.49 +0.2 4,928,801 + Echvi_4116 0.49 +0.4 4,928,802 - Echvi_4116 0.49 -1.2 4,928,802 - Echvi_4116 0.49 -1.5 4,928,805 + Echvi_4116 0.49 -2.1 4,928,806 - Echvi_4116 0.49 -0.3 4,928,806 - Echvi_4116 0.49 -0.8 4,928,806 - Echvi_4116 0.49 +0.1 4,928,806 - Echvi_4116 0.49 -1.7 4,928,806 - Echvi_4116 0.49 -1.9 4,928,922 + Echvi_4116 0.58 +0.2 4,928,930 - Echvi_4116 0.59 -1.5 4,928,952 + Echvi_4116 0.61 -0.9 4,928,953 - Echvi_4116 0.61 -1.7 4,928,953 - Echvi_4116 0.61 -0.2 4,928,988 + Echvi_4116 0.64 +0.4 4,928,993 + Echvi_4116 0.64 -0.8 4,929,019 + Echvi_4116 0.66 +2.7 4,929,019 + Echvi_4116 0.66 -0.2 4,929,019 + Echvi_4116 0.66 +2.0 4,929,026 + Echvi_4116 0.67 -1.9
Or see this region's nucleotide sequence