Experiment: m.b. Thallium(I) acetate 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_3736 and Echvi_3737 are separated by 20 nucleotides Echvi_3737 and Echvi_3738 are separated by 54 nucleotides
Echvi_3736: Echvi_3736 - Imidazolonepropionase and related amidohydrolases, at 4,448,308 to 4,449,726
_3736
Echvi_3737: Echvi_3737 - o-succinylbenzoate synthase, at 4,449,747 to 4,450,844
_3737
Echvi_3738: Echvi_3738 - S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase), at 4,450,899 to 4,452,176
_3738
Position (kb)
4449
4450
4451 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 4448.759 kb on + strand, within Echvi_3736 at 4448.773 kb on + strand, within Echvi_3736 at 4448.774 kb on - strand, within Echvi_3736 at 4448.776 kb on - strand, within Echvi_3736 at 4448.776 kb on - strand, within Echvi_3736 at 4448.895 kb on - strand, within Echvi_3736 at 4448.933 kb on + strand, within Echvi_3736 at 4448.957 kb on + strand, within Echvi_3736 at 4448.957 kb on + strand, within Echvi_3736 at 4448.958 kb on - strand, within Echvi_3736 at 4448.958 kb on - strand, within Echvi_3736 at 4449.158 kb on + strand, within Echvi_3736 at 4449.159 kb on - strand, within Echvi_3736 at 4449.159 kb on - strand, within Echvi_3736 at 4449.159 kb on - strand, within Echvi_3736 at 4449.242 kb on + strand, within Echvi_3736 at 4449.242 kb on + strand, within Echvi_3736 at 4449.242 kb on + strand, within Echvi_3736 at 4449.244 kb on + strand, within Echvi_3736 at 4449.244 kb on + strand, within Echvi_3736 at 4449.245 kb on - strand, within Echvi_3736 at 4449.245 kb on - strand, within Echvi_3736 at 4449.310 kb on + strand, within Echvi_3736 at 4449.311 kb on - strand, within Echvi_3736 at 4449.619 kb on - strand at 4449.702 kb on + strand at 4449.706 kb on + strand at 4449.707 kb on - strand at 4449.712 kb on - strand at 4450.864 kb on + strand at 4450.864 kb on + strand at 4450.864 kb on + strand at 4450.865 kb on - strand at 4450.888 kb on + strand at 4450.908 kb on - strand at 4450.947 kb on - strand at 4450.987 kb on - strand at 4450.992 kb on + strand at 4451.048 kb on + strand, within Echvi_3738 at 4451.062 kb on - strand, within Echvi_3738 at 4451.095 kb on - strand, within Echvi_3738 at 4451.138 kb on + strand, within Echvi_3738 at 4451.170 kb on + strand, within Echvi_3738 at 4451.170 kb on + strand, within Echvi_3738 at 4451.171 kb on - strand, within Echvi_3738 at 4451.198 kb on - strand, within Echvi_3738 at 4451.270 kb on + strand, within Echvi_3738 at 4451.330 kb on + strand, within Echvi_3738 at 4451.330 kb on + strand, within Echvi_3738 at 4451.330 kb on + strand, within Echvi_3738 at 4451.330 kb on + strand, within Echvi_3738 at 4451.330 kb on + strand, within Echvi_3738 at 4451.331 kb on - strand, within Echvi_3738 at 4451.349 kb on - strand, within Echvi_3738 at 4451.363 kb on - strand, within Echvi_3738 at 4451.363 kb on - strand, within Echvi_3738 at 4451.440 kb on + strand, within Echvi_3738 at 4451.443 kb on + strand, within Echvi_3738 at 4451.462 kb on - strand, within Echvi_3738 at 4451.525 kb on - strand, within Echvi_3738 at 4451.527 kb on - strand, within Echvi_3738 at 4451.527 kb on - strand, within Echvi_3738 at 4451.625 kb on + strand, within Echvi_3738 at 4451.677 kb on + strand, within Echvi_3738 at 4451.677 kb on + strand, within Echvi_3738 at 4451.678 kb on - strand, within Echvi_3738 at 4451.678 kb on - strand, within Echvi_3738 at 4451.678 kb on - strand, within Echvi_3738 at 4451.801 kb on + strand, within Echvi_3738 at 4451.806 kb on - strand, within Echvi_3738 at 4451.811 kb on + strand, within Echvi_3738 at 4451.827 kb on + strand, within Echvi_3738
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.05 mg/ml remove 4,448,759 + Echvi_3736 0.32 -0.5 4,448,773 + Echvi_3736 0.33 -0.3 4,448,774 - Echvi_3736 0.33 +0.5 4,448,776 - Echvi_3736 0.33 -0.2 4,448,776 - Echvi_3736 0.33 +1.4 4,448,895 - Echvi_3736 0.41 +3.1 4,448,933 + Echvi_3736 0.44 -0.3 4,448,957 + Echvi_3736 0.46 -0.8 4,448,957 + Echvi_3736 0.46 -0.0 4,448,958 - Echvi_3736 0.46 +0.7 4,448,958 - Echvi_3736 0.46 -0.1 4,449,158 + Echvi_3736 0.60 -1.8 4,449,159 - Echvi_3736 0.60 -0.2 4,449,159 - Echvi_3736 0.60 -0.3 4,449,159 - Echvi_3736 0.60 +0.1 4,449,242 + Echvi_3736 0.66 +0.1 4,449,242 + Echvi_3736 0.66 -0.1 4,449,242 + Echvi_3736 0.66 +0.1 4,449,244 + Echvi_3736 0.66 +0.5 4,449,244 + Echvi_3736 0.66 +0.7 4,449,245 - Echvi_3736 0.66 -0.2 4,449,245 - Echvi_3736 0.66 -0.2 4,449,310 + Echvi_3736 0.71 -0.2 4,449,311 - Echvi_3736 0.71 +0.4 4,449,619 - -0.9 4,449,702 + -0.2 4,449,706 + -0.0 4,449,707 - +0.8 4,449,712 - -0.1 4,450,864 + -0.8 4,450,864 + -0.3 4,450,864 + -0.9 4,450,865 - +0.1 4,450,888 + +0.2 4,450,908 - -0.8 4,450,947 - +1.8 4,450,987 - -0.0 4,450,992 + -0.8 4,451,048 + Echvi_3738 0.12 -1.2 4,451,062 - Echvi_3738 0.13 -0.2 4,451,095 - Echvi_3738 0.15 -1.0 4,451,138 + Echvi_3738 0.19 +0.3 4,451,170 + Echvi_3738 0.21 -0.2 4,451,170 + Echvi_3738 0.21 -0.7 4,451,171 - Echvi_3738 0.21 -1.7 4,451,198 - Echvi_3738 0.23 +0.5 4,451,270 + Echvi_3738 0.29 -2.1 4,451,330 + Echvi_3738 0.34 -0.3 4,451,330 + Echvi_3738 0.34 -0.8 4,451,330 + Echvi_3738 0.34 -1.2 4,451,330 + Echvi_3738 0.34 -0.5 4,451,330 + Echvi_3738 0.34 -0.0 4,451,331 - Echvi_3738 0.34 +1.1 4,451,349 - Echvi_3738 0.35 -0.3 4,451,363 - Echvi_3738 0.36 -1.0 4,451,363 - Echvi_3738 0.36 -1.0 4,451,440 + Echvi_3738 0.42 +0.6 4,451,443 + Echvi_3738 0.43 +1.7 4,451,462 - Echvi_3738 0.44 +0.5 4,451,525 - Echvi_3738 0.49 -1.1 4,451,527 - Echvi_3738 0.49 -2.4 4,451,527 - Echvi_3738 0.49 -0.6 4,451,625 + Echvi_3738 0.57 -0.6 4,451,677 + Echvi_3738 0.61 -0.4 4,451,677 + Echvi_3738 0.61 -0.5 4,451,678 - Echvi_3738 0.61 +0.1 4,451,678 - Echvi_3738 0.61 +0.3 4,451,678 - Echvi_3738 0.61 +0.8 4,451,801 + Echvi_3738 0.71 +0.0 4,451,806 - Echvi_3738 0.71 +0.3 4,451,811 + Echvi_3738 0.71 -0.8 4,451,827 + Echvi_3738 0.73 -1.1
Or see this region's nucleotide sequence