Experiment: m.b. Thallium(I) acetate 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_1160 and Echvi_1161 are separated by 100 nucleotides Echvi_1161 and Echvi_1162 are separated by 162 nucleotides
Echvi_1160: Echvi_1160 - Alpha-L-fucosidase, at 1,327,165 to 1,329,219
_1160
Echvi_1161: Echvi_1161 - tRNA and rRNA cytosine-C5-methylases, at 1,329,320 to 1,330,615
_1161
Echvi_1162: Echvi_1162 - ATP-dependent DNA helicase RecG, at 1,330,778 to 1,332,871
_1162
Position (kb)
1329
1330
1331 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1328.327 kb on - strand, within Echvi_1160 at 1328.327 kb on - strand, within Echvi_1160 at 1328.331 kb on + strand, within Echvi_1160 at 1328.342 kb on + strand, within Echvi_1160 at 1328.351 kb on + strand, within Echvi_1160 at 1328.351 kb on + strand, within Echvi_1160 at 1328.352 kb on - strand, within Echvi_1160 at 1328.354 kb on + strand, within Echvi_1160 at 1328.355 kb on - strand, within Echvi_1160 at 1328.355 kb on - strand, within Echvi_1160 at 1328.355 kb on - strand, within Echvi_1160 at 1328.426 kb on + strand, within Echvi_1160 at 1328.438 kb on + strand, within Echvi_1160 at 1328.438 kb on + strand, within Echvi_1160 at 1328.438 kb on + strand, within Echvi_1160 at 1328.439 kb on - strand, within Echvi_1160 at 1328.442 kb on + strand, within Echvi_1160 at 1328.442 kb on + strand, within Echvi_1160 at 1328.442 kb on + strand, within Echvi_1160 at 1328.442 kb on + strand, within Echvi_1160 at 1328.443 kb on - strand, within Echvi_1160 at 1328.443 kb on - strand, within Echvi_1160 at 1328.443 kb on - strand, within Echvi_1160 at 1328.457 kb on - strand, within Echvi_1160 at 1328.457 kb on - strand, within Echvi_1160 at 1328.457 kb on - strand, within Echvi_1160 at 1328.457 kb on - strand, within Echvi_1160 at 1328.457 kb on - strand, within Echvi_1160 at 1328.495 kb on + strand, within Echvi_1160 at 1328.496 kb on - strand, within Echvi_1160 at 1328.496 kb on - strand, within Echvi_1160 at 1328.514 kb on + strand, within Echvi_1160 at 1328.514 kb on + strand, within Echvi_1160 at 1328.515 kb on - strand, within Echvi_1160 at 1328.515 kb on - strand, within Echvi_1160 at 1328.518 kb on + strand, within Echvi_1160 at 1328.519 kb on - strand, within Echvi_1160 at 1328.587 kb on - strand, within Echvi_1160 at 1328.587 kb on - strand, within Echvi_1160 at 1328.588 kb on + strand, within Echvi_1160 at 1328.588 kb on + strand, within Echvi_1160 at 1328.588 kb on + strand, within Echvi_1160 at 1328.589 kb on - strand, within Echvi_1160 at 1328.589 kb on - strand, within Echvi_1160 at 1328.593 kb on - strand, within Echvi_1160 at 1328.593 kb on - strand, within Echvi_1160 at 1328.651 kb on + strand, within Echvi_1160 at 1328.652 kb on - strand, within Echvi_1160 at 1328.696 kb on - strand, within Echvi_1160 at 1328.696 kb on - strand, within Echvi_1160 at 1328.705 kb on + strand, within Echvi_1160 at 1328.706 kb on - strand, within Echvi_1160 at 1328.748 kb on + strand, within Echvi_1160 at 1328.748 kb on + strand, within Echvi_1160 at 1328.748 kb on + strand, within Echvi_1160 at 1328.748 kb on + strand, within Echvi_1160 at 1328.748 kb on + strand, within Echvi_1160 at 1328.748 kb on + strand, within Echvi_1160 at 1328.748 kb on + strand, within Echvi_1160 at 1328.749 kb on - strand, within Echvi_1160 at 1328.749 kb on - strand, within Echvi_1160 at 1328.750 kb on + strand, within Echvi_1160 at 1328.750 kb on + strand, within Echvi_1160 at 1328.750 kb on + strand, within Echvi_1160 at 1328.750 kb on + strand, within Echvi_1160 at 1328.751 kb on - strand, within Echvi_1160 at 1328.775 kb on + strand, within Echvi_1160 at 1328.795 kb on - strand, within Echvi_1160 at 1328.798 kb on + strand, within Echvi_1160 at 1328.799 kb on - strand, within Echvi_1160 at 1328.799 kb on - strand, within Echvi_1160 at 1328.820 kb on - strand, within Echvi_1160 at 1329.024 kb on + strand at 1329.205 kb on + strand at 1329.205 kb on + strand at 1329.205 kb on + strand at 1329.205 kb on + strand at 1329.206 kb on - strand at 1329.209 kb on + strand at 1329.229 kb on + strand at 1329.231 kb on + strand at 1329.232 kb on - strand at 1329.249 kb on + strand at 1329.250 kb on - strand at 1329.250 kb on - strand at 1329.250 kb on - strand at 1329.250 kb on - strand at 1329.251 kb on + strand at 1329.252 kb on - strand at 1329.305 kb on + strand at 1329.305 kb on + strand at 1329.306 kb on - strand at 1329.306 kb on - strand at 1329.306 kb on - strand at 1329.309 kb on + strand at 1329.324 kb on + strand at 1329.324 kb on + strand at 1329.327 kb on + strand at 1329.327 kb on + strand at 1329.328 kb on - strand at 1329.357 kb on - strand at 1329.357 kb on - strand at 1329.397 kb on + strand at 1329.411 kb on + strand at 1329.436 kb on - strand at 1329.436 kb on - strand at 1329.438 kb on - strand at 1329.497 kb on + strand, within Echvi_1161 at 1329.498 kb on - strand, within Echvi_1161 at 1329.498 kb on - strand, within Echvi_1161 at 1329.579 kb on + strand, within Echvi_1161 at 1329.579 kb on + strand, within Echvi_1161 at 1329.580 kb on - strand, within Echvi_1161 at 1329.581 kb on + strand, within Echvi_1161 at 1329.582 kb on - strand, within Echvi_1161 at 1329.638 kb on + strand, within Echvi_1161 at 1329.638 kb on + strand, within Echvi_1161 at 1329.639 kb on - strand, within Echvi_1161 at 1329.652 kb on + strand, within Echvi_1161 at 1329.656 kb on + strand, within Echvi_1161 at 1329.657 kb on - strand, within Echvi_1161 at 1329.657 kb on - strand, within Echvi_1161 at 1329.746 kb on - strand, within Echvi_1161 at 1329.746 kb on - strand, within Echvi_1161 at 1329.746 kb on - strand, within Echvi_1161 at 1329.746 kb on - strand, within Echvi_1161 at 1329.746 kb on - strand, within Echvi_1161 at 1329.746 kb on - strand, within Echvi_1161 at 1329.880 kb on + strand, within Echvi_1161 at 1329.887 kb on - strand at 1329.935 kb on + strand, within Echvi_1161 at 1329.935 kb on + strand, within Echvi_1161 at 1329.935 kb on + strand, within Echvi_1161 at 1329.935 kb on + strand, within Echvi_1161 at 1329.936 kb on - strand, within Echvi_1161 at 1329.936 kb on - strand, within Echvi_1161 at 1329.936 kb on - strand, within Echvi_1161 at 1330.006 kb on + strand, within Echvi_1161 at 1330.006 kb on + strand, within Echvi_1161 at 1330.007 kb on - strand, within Echvi_1161 at 1330.007 kb on - strand, within Echvi_1161 at 1330.019 kb on + strand, within Echvi_1161 at 1330.225 kb on + strand, within Echvi_1161 at 1330.226 kb on - strand, within Echvi_1161 at 1330.258 kb on + strand, within Echvi_1161 at 1330.259 kb on - strand, within Echvi_1161 at 1330.259 kb on - strand, within Echvi_1161 at 1330.418 kb on + strand, within Echvi_1161 at 1330.454 kb on + strand, within Echvi_1161 at 1330.455 kb on - strand, within Echvi_1161 at 1330.455 kb on - strand, within Echvi_1161 at 1330.455 kb on - strand, within Echvi_1161 at 1330.455 kb on - strand, within Echvi_1161 at 1330.459 kb on + strand, within Echvi_1161 at 1330.459 kb on + strand, within Echvi_1161 at 1330.459 kb on + strand, within Echvi_1161 at 1330.460 kb on - strand, within Echvi_1161 at 1330.460 kb on - strand, within Echvi_1161 at 1330.468 kb on + strand, within Echvi_1161 at 1330.468 kb on + strand, within Echvi_1161 at 1330.469 kb on - strand, within Echvi_1161 at 1330.534 kb on + strand at 1330.535 kb on - strand at 1330.589 kb on + strand at 1330.589 kb on + strand at 1330.589 kb on + strand at 1330.589 kb on + strand at 1330.589 kb on + strand at 1330.590 kb on - strand at 1330.590 kb on - strand at 1330.590 kb on - strand at 1330.590 kb on - strand at 1330.590 kb on - strand at 1330.590 kb on - strand at 1330.590 kb on - strand at 1330.613 kb on + strand at 1330.614 kb on - strand at 1330.614 kb on - strand at 1330.651 kb on + strand at 1330.666 kb on + strand at 1330.667 kb on - strand at 1330.667 kb on - strand at 1330.667 kb on - strand at 1330.667 kb on - strand at 1330.703 kb on - strand at 1330.767 kb on - strand at 1330.849 kb on + strand at 1330.865 kb on + strand at 1330.866 kb on - strand at 1330.866 kb on - strand at 1331.011 kb on + strand, within Echvi_1162 at 1331.030 kb on + strand, within Echvi_1162 at 1331.032 kb on + strand, within Echvi_1162 at 1331.032 kb on + strand, within Echvi_1162 at 1331.032 kb on + strand, within Echvi_1162 at 1331.032 kb on + strand, within Echvi_1162 at 1331.033 kb on - strand, within Echvi_1162 at 1331.033 kb on - strand, within Echvi_1162 at 1331.149 kb on + strand, within Echvi_1162 at 1331.301 kb on + strand, within Echvi_1162 at 1331.422 kb on - strand, within Echvi_1162 at 1331.494 kb on + strand, within Echvi_1162 at 1331.523 kb on + strand, within Echvi_1162 at 1331.524 kb on - strand, within Echvi_1162 at 1331.556 kb on - strand, within Echvi_1162
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.05 mg/ml remove 1,328,327 - Echvi_1160 0.57 -0.8 1,328,327 - Echvi_1160 0.57 +1.2 1,328,331 + Echvi_1160 0.57 +0.2 1,328,342 + Echvi_1160 0.57 -0.5 1,328,351 + Echvi_1160 0.58 +0.2 1,328,351 + Echvi_1160 0.58 +2.0 1,328,352 - Echvi_1160 0.58 -1.5 1,328,354 + Echvi_1160 0.58 -1.3 1,328,355 - Echvi_1160 0.58 +0.5 1,328,355 - Echvi_1160 0.58 -0.4 1,328,355 - Echvi_1160 0.58 +0.3 1,328,426 + Echvi_1160 0.61 +0.3 1,328,438 + Echvi_1160 0.62 -0.4 1,328,438 + Echvi_1160 0.62 +0.7 1,328,438 + Echvi_1160 0.62 -1.3 1,328,439 - Echvi_1160 0.62 +0.5 1,328,442 + Echvi_1160 0.62 +0.4 1,328,442 + Echvi_1160 0.62 +1.1 1,328,442 + Echvi_1160 0.62 -1.6 1,328,442 + Echvi_1160 0.62 -0.3 1,328,443 - Echvi_1160 0.62 +0.5 1,328,443 - Echvi_1160 0.62 +0.4 1,328,443 - Echvi_1160 0.62 +1.0 1,328,457 - Echvi_1160 0.63 +2.0 1,328,457 - Echvi_1160 0.63 -0.3 1,328,457 - Echvi_1160 0.63 +0.3 1,328,457 - Echvi_1160 0.63 -0.4 1,328,457 - Echvi_1160 0.63 -2.6 1,328,495 + Echvi_1160 0.65 +0.2 1,328,496 - Echvi_1160 0.65 +0.4 1,328,496 - Echvi_1160 0.65 -0.6 1,328,514 + Echvi_1160 0.66 -1.8 1,328,514 + Echvi_1160 0.66 +0.6 1,328,515 - Echvi_1160 0.66 +0.2 1,328,515 - Echvi_1160 0.66 -0.7 1,328,518 + Echvi_1160 0.66 -0.1 1,328,519 - Echvi_1160 0.66 -0.1 1,328,587 - Echvi_1160 0.69 -2.1 1,328,587 - Echvi_1160 0.69 -0.4 1,328,588 + Echvi_1160 0.69 -0.3 1,328,588 + Echvi_1160 0.69 +0.2 1,328,588 + Echvi_1160 0.69 +0.7 1,328,589 - Echvi_1160 0.69 +0.0 1,328,589 - Echvi_1160 0.69 -0.8 1,328,593 - Echvi_1160 0.69 -1.1 1,328,593 - Echvi_1160 0.69 -0.3 1,328,651 + Echvi_1160 0.72 -1.1 1,328,652 - Echvi_1160 0.72 -0.5 1,328,696 - Echvi_1160 0.75 +0.5 1,328,696 - Echvi_1160 0.75 -1.7 1,328,705 + Echvi_1160 0.75 +1.0 1,328,706 - Echvi_1160 0.75 -0.5 1,328,748 + Echvi_1160 0.77 +0.1 1,328,748 + Echvi_1160 0.77 -0.8 1,328,748 + Echvi_1160 0.77 -0.2 1,328,748 + Echvi_1160 0.77 -1.6 1,328,748 + Echvi_1160 0.77 +0.7 1,328,748 + Echvi_1160 0.77 +0.1 1,328,748 + Echvi_1160 0.77 +0.4 1,328,749 - Echvi_1160 0.77 -0.3 1,328,749 - Echvi_1160 0.77 -0.1 1,328,750 + Echvi_1160 0.77 -0.3 1,328,750 + Echvi_1160 0.77 -0.3 1,328,750 + Echvi_1160 0.77 +0.7 1,328,750 + Echvi_1160 0.77 -0.3 1,328,751 - Echvi_1160 0.77 -2.8 1,328,775 + Echvi_1160 0.78 +0.6 1,328,795 - Echvi_1160 0.79 +0.2 1,328,798 + Echvi_1160 0.79 +1.7 1,328,799 - Echvi_1160 0.80 -1.9 1,328,799 - Echvi_1160 0.80 -0.4 1,328,820 - Echvi_1160 0.81 -0.5 1,329,024 + -0.8 1,329,205 + +0.4 1,329,205 + +0.5 1,329,205 + -1.3 1,329,205 + -0.5 1,329,206 - -1.0 1,329,209 + -0.3 1,329,229 + +0.1 1,329,231 + +0.7 1,329,232 - +0.5 1,329,249 + +2.1 1,329,250 - -0.9 1,329,250 - +0.9 1,329,250 - +0.5 1,329,250 - -1.1 1,329,251 + -0.3 1,329,252 - -0.9 1,329,305 + +0.7 1,329,305 + +0.4 1,329,306 - -0.8 1,329,306 - +1.2 1,329,306 - -0.0 1,329,309 + +0.4 1,329,324 + +0.2 1,329,324 + +2.2 1,329,327 + -0.4 1,329,327 + -0.9 1,329,328 - -0.8 1,329,357 - +3.1 1,329,357 - +0.4 1,329,397 + -1.2 1,329,411 + +0.3 1,329,436 - +0.2 1,329,436 - +1.3 1,329,438 - +1.3 1,329,497 + Echvi_1161 0.14 +0.4 1,329,498 - Echvi_1161 0.14 +0.0 1,329,498 - Echvi_1161 0.14 +2.0 1,329,579 + Echvi_1161 0.20 -1.6 1,329,579 + Echvi_1161 0.20 -0.8 1,329,580 - Echvi_1161 0.20 +0.9 1,329,581 + Echvi_1161 0.20 +1.1 1,329,582 - Echvi_1161 0.20 +0.4 1,329,638 + Echvi_1161 0.25 -0.7 1,329,638 + Echvi_1161 0.25 +0.8 1,329,639 - Echvi_1161 0.25 +0.8 1,329,652 + Echvi_1161 0.26 -0.1 1,329,656 + Echvi_1161 0.26 -0.9 1,329,657 - Echvi_1161 0.26 +0.9 1,329,657 - Echvi_1161 0.26 -0.4 1,329,746 - Echvi_1161 0.33 +0.2 1,329,746 - Echvi_1161 0.33 -0.5 1,329,746 - Echvi_1161 0.33 +0.8 1,329,746 - Echvi_1161 0.33 -0.5 1,329,746 - Echvi_1161 0.33 +0.5 1,329,746 - Echvi_1161 0.33 -0.2 1,329,880 + Echvi_1161 0.43 +0.6 1,329,887 - +0.9 1,329,935 + Echvi_1161 0.47 -0.5 1,329,935 + Echvi_1161 0.47 +0.9 1,329,935 + Echvi_1161 0.47 -1.5 1,329,935 + Echvi_1161 0.47 -1.3 1,329,936 - Echvi_1161 0.48 -0.1 1,329,936 - Echvi_1161 0.48 -0.3 1,329,936 - Echvi_1161 0.48 +0.1 1,330,006 + Echvi_1161 0.53 +1.3 1,330,006 + Echvi_1161 0.53 +0.3 1,330,007 - Echvi_1161 0.53 +0.2 1,330,007 - Echvi_1161 0.53 -0.3 1,330,019 + Echvi_1161 0.54 -2.2 1,330,225 + Echvi_1161 0.70 -0.2 1,330,226 - Echvi_1161 0.70 +0.8 1,330,258 + Echvi_1161 0.72 -0.4 1,330,259 - Echvi_1161 0.72 -1.2 1,330,259 - Echvi_1161 0.72 -0.3 1,330,418 + Echvi_1161 0.85 -0.2 1,330,454 + Echvi_1161 0.88 +0.4 1,330,455 - Echvi_1161 0.88 -0.2 1,330,455 - Echvi_1161 0.88 +0.3 1,330,455 - Echvi_1161 0.88 -0.1 1,330,455 - Echvi_1161 0.88 -0.1 1,330,459 + Echvi_1161 0.88 -1.1 1,330,459 + Echvi_1161 0.88 +0.0 1,330,459 + Echvi_1161 0.88 -1.1 1,330,460 - Echvi_1161 0.88 +1.1 1,330,460 - Echvi_1161 0.88 -1.9 1,330,468 + Echvi_1161 0.89 -0.2 1,330,468 + Echvi_1161 0.89 -0.1 1,330,469 - Echvi_1161 0.89 -1.1 1,330,534 + -0.1 1,330,535 - -0.1 1,330,589 + -1.0 1,330,589 + +2.4 1,330,589 + +0.0 1,330,589 + -0.3 1,330,589 + +0.4 1,330,590 - -0.2 1,330,590 - -0.0 1,330,590 - +0.4 1,330,590 - -0.1 1,330,590 - +1.9 1,330,590 - -0.7 1,330,590 - +2.0 1,330,613 + -1.1 1,330,614 - +1.1 1,330,614 - +0.2 1,330,651 + +0.6 1,330,666 + -0.2 1,330,667 - +0.4 1,330,667 - +0.4 1,330,667 - -0.1 1,330,667 - +1.5 1,330,703 - -0.6 1,330,767 - +0.1 1,330,849 + +0.4 1,330,865 + -0.4 1,330,866 - +0.6 1,330,866 - +0.2 1,331,011 + Echvi_1162 0.11 +0.3 1,331,030 + Echvi_1162 0.12 +0.2 1,331,032 + Echvi_1162 0.12 +0.7 1,331,032 + Echvi_1162 0.12 -0.3 1,331,032 + Echvi_1162 0.12 +1.3 1,331,032 + Echvi_1162 0.12 +0.6 1,331,033 - Echvi_1162 0.12 +0.7 1,331,033 - Echvi_1162 0.12 +1.0 1,331,149 + Echvi_1162 0.18 +1.5 1,331,301 + Echvi_1162 0.25 -0.3 1,331,422 - Echvi_1162 0.31 -0.0 1,331,494 + Echvi_1162 0.34 +0.3 1,331,523 + Echvi_1162 0.36 -0.1 1,331,524 - Echvi_1162 0.36 +0.1 1,331,556 - Echvi_1162 0.37 +0.1
Or see this region's nucleotide sequence