Experiment: m.b. Thallium(I) acetate 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_1095 and Echvi_1096 are separated by 11 nucleotides Echvi_1096 and Echvi_1097 are separated by 4 nucleotides Echvi_1097 and Echvi_1098 are separated by 20 nucleotides
Echvi_1095: Echvi_1095 - nitrate transport ATP-binding subunits C and D, at 1,255,068 to 1,255,886
_1095
Echvi_1096: Echvi_1096 - nitrate transport ATP-binding subunits C and D, at 1,255,898 to 1,256,782
_1096
Echvi_1097: Echvi_1097 - ABC-type nitrate/sulfonate/bicarbonate transport system, permease component, at 1,256,787 to 1,257,878
_1097
Echvi_1098: Echvi_1098 - ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components, at 1,257,899 to 1,259,290
_1098
Position (kb)
1256
1257
1258 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1255.795 kb on + strand, within Echvi_1095 at 1255.795 kb on + strand, within Echvi_1095 at 1255.796 kb on - strand, within Echvi_1095 at 1255.796 kb on - strand, within Echvi_1095 at 1255.796 kb on - strand, within Echvi_1095 at 1255.796 kb on - strand, within Echvi_1095 at 1255.796 kb on - strand, within Echvi_1095 at 1255.796 kb on - strand, within Echvi_1095 at 1255.796 kb on - strand, within Echvi_1095 at 1255.872 kb on + strand at 1255.873 kb on - strand at 1255.873 kb on - strand at 1255.873 kb on - strand at 1255.875 kb on + strand at 1255.875 kb on + strand at 1255.899 kb on + strand at 1255.900 kb on - strand at 1255.905 kb on + strand at 1255.906 kb on - strand at 1255.906 kb on - strand at 1255.943 kb on + strand at 1255.944 kb on - strand at 1255.967 kb on + strand at 1255.983 kb on + strand at 1255.983 kb on + strand at 1255.983 kb on + strand at 1255.983 kb on + strand at 1255.984 kb on - strand at 1255.984 kb on - strand at 1255.984 kb on - strand at 1255.984 kb on - strand at 1255.984 kb on - strand at 1256.019 kb on - strand, within Echvi_1096 at 1256.019 kb on - strand, within Echvi_1096 at 1256.019 kb on - strand, within Echvi_1096 at 1256.024 kb on + strand, within Echvi_1096 at 1256.061 kb on + strand, within Echvi_1096 at 1256.061 kb on + strand, within Echvi_1096 at 1256.116 kb on + strand, within Echvi_1096 at 1256.203 kb on + strand, within Echvi_1096 at 1256.411 kb on + strand, within Echvi_1096 at 1256.411 kb on + strand, within Echvi_1096 at 1256.412 kb on - strand, within Echvi_1096 at 1256.412 kb on - strand, within Echvi_1096 at 1256.434 kb on + strand, within Echvi_1096 at 1256.502 kb on + strand, within Echvi_1096 at 1256.502 kb on + strand, within Echvi_1096 at 1256.756 kb on + strand at 1256.757 kb on - strand at 1256.771 kb on + strand at 1256.772 kb on - strand at 1256.788 kb on + strand at 1256.789 kb on - strand at 1256.808 kb on + strand at 1256.822 kb on + strand at 1256.865 kb on - strand at 1256.865 kb on - strand at 1256.865 kb on - strand at 1256.977 kb on - strand, within Echvi_1097 at 1257.095 kb on + strand, within Echvi_1097 at 1257.095 kb on + strand, within Echvi_1097 at 1257.096 kb on - strand, within Echvi_1097 at 1257.096 kb on - strand, within Echvi_1097 at 1257.098 kb on + strand, within Echvi_1097 at 1257.098 kb on + strand, within Echvi_1097 at 1257.099 kb on - strand, within Echvi_1097 at 1257.099 kb on - strand, within Echvi_1097 at 1257.100 kb on + strand, within Echvi_1097 at 1257.100 kb on + strand, within Echvi_1097 at 1257.100 kb on + strand, within Echvi_1097 at 1257.101 kb on - strand, within Echvi_1097 at 1257.101 kb on - strand, within Echvi_1097 at 1257.101 kb on - strand, within Echvi_1097 at 1257.139 kb on - strand, within Echvi_1097 at 1257.139 kb on - strand, within Echvi_1097 at 1257.241 kb on - strand, within Echvi_1097 at 1257.433 kb on + strand, within Echvi_1097 at 1257.515 kb on + strand, within Echvi_1097 at 1257.556 kb on + strand, within Echvi_1097 at 1257.556 kb on + strand, within Echvi_1097 at 1257.556 kb on + strand, within Echvi_1097 at 1257.556 kb on + strand, within Echvi_1097 at 1257.556 kb on + strand, within Echvi_1097 at 1257.556 kb on + strand, within Echvi_1097 at 1257.556 kb on + strand, within Echvi_1097 at 1257.557 kb on - strand, within Echvi_1097 at 1257.558 kb on + strand, within Echvi_1097 at 1257.559 kb on - strand, within Echvi_1097 at 1257.600 kb on - strand, within Echvi_1097 at 1257.694 kb on + strand, within Echvi_1097 at 1257.695 kb on - strand, within Echvi_1097 at 1257.695 kb on - strand, within Echvi_1097 at 1257.728 kb on + strand, within Echvi_1097 at 1257.732 kb on + strand, within Echvi_1097 at 1257.733 kb on - strand, within Echvi_1097 at 1257.733 kb on - strand, within Echvi_1097 at 1257.843 kb on + strand at 1257.844 kb on - strand at 1257.920 kb on - strand at 1257.933 kb on + strand at 1257.934 kb on - strand at 1257.957 kb on + strand at 1257.958 kb on - strand at 1257.958 kb on - strand at 1257.996 kb on + strand at 1257.997 kb on - strand at 1257.997 kb on - strand at 1258.015 kb on + strand at 1258.084 kb on - strand, within Echvi_1098 at 1258.171 kb on + strand, within Echvi_1098 at 1258.182 kb on + strand, within Echvi_1098 at 1258.182 kb on + strand, within Echvi_1098 at 1258.183 kb on - strand, within Echvi_1098 at 1258.183 kb on - strand, within Echvi_1098 at 1258.183 kb on - strand, within Echvi_1098 at 1258.191 kb on + strand, within Echvi_1098 at 1258.191 kb on + strand, within Echvi_1098 at 1258.191 kb on + strand, within Echvi_1098 at 1258.192 kb on - strand, within Echvi_1098 at 1258.192 kb on - strand, within Echvi_1098 at 1258.220 kb on - strand, within Echvi_1098 at 1258.308 kb on + strand, within Echvi_1098 at 1258.309 kb on - strand, within Echvi_1098 at 1258.472 kb on + strand, within Echvi_1098 at 1258.473 kb on - strand, within Echvi_1098 at 1258.479 kb on + strand, within Echvi_1098 at 1258.479 kb on + strand, within Echvi_1098 at 1258.480 kb on - strand, within Echvi_1098 at 1258.541 kb on + strand, within Echvi_1098 at 1258.549 kb on - strand, within Echvi_1098 at 1258.549 kb on - strand, within Echvi_1098 at 1258.554 kb on + strand, within Echvi_1098 at 1258.554 kb on + strand, within Echvi_1098 at 1258.555 kb on - strand, within Echvi_1098 at 1258.555 kb on - strand, within Echvi_1098 at 1258.555 kb on - strand, within Echvi_1098 at 1258.555 kb on - strand, within Echvi_1098 at 1258.607 kb on + strand, within Echvi_1098 at 1258.653 kb on + strand, within Echvi_1098 at 1258.689 kb on + strand, within Echvi_1098 at 1258.702 kb on - strand, within Echvi_1098 at 1258.702 kb on - strand, within Echvi_1098 at 1258.702 kb on - strand, within Echvi_1098 at 1258.760 kb on - strand, within Echvi_1098 at 1258.760 kb on - strand, within Echvi_1098 at 1258.762 kb on - strand, within Echvi_1098 at 1258.828 kb on + strand, within Echvi_1098 at 1258.873 kb on + strand, within Echvi_1098 at 1258.874 kb on - strand, within Echvi_1098
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.05 mg/ml remove 1,255,795 + Echvi_1095 0.89 -2.7 1,255,795 + Echvi_1095 0.89 -0.0 1,255,796 - Echvi_1095 0.89 -0.8 1,255,796 - Echvi_1095 0.89 -1.4 1,255,796 - Echvi_1095 0.89 +0.7 1,255,796 - Echvi_1095 0.89 -0.5 1,255,796 - Echvi_1095 0.89 -1.1 1,255,796 - Echvi_1095 0.89 +0.1 1,255,796 - Echvi_1095 0.89 -1.0 1,255,872 + +0.9 1,255,873 - +0.6 1,255,873 - +0.1 1,255,873 - -0.7 1,255,875 + +0.2 1,255,875 + +0.8 1,255,899 + -0.2 1,255,900 - +0.7 1,255,905 + +1.2 1,255,906 - -0.1 1,255,906 - +0.6 1,255,943 + +1.1 1,255,944 - -1.0 1,255,967 + +0.8 1,255,983 + -0.3 1,255,983 + +0.0 1,255,983 + +0.5 1,255,983 + -1.5 1,255,984 - -1.6 1,255,984 - -0.2 1,255,984 - +0.3 1,255,984 - -0.9 1,255,984 - -0.6 1,256,019 - Echvi_1096 0.14 +0.3 1,256,019 - Echvi_1096 0.14 -0.9 1,256,019 - Echvi_1096 0.14 +0.0 1,256,024 + Echvi_1096 0.14 +0.7 1,256,061 + Echvi_1096 0.18 +0.2 1,256,061 + Echvi_1096 0.18 +2.3 1,256,116 + Echvi_1096 0.25 -0.3 1,256,203 + Echvi_1096 0.34 -0.3 1,256,411 + Echvi_1096 0.58 +0.6 1,256,411 + Echvi_1096 0.58 -0.2 1,256,412 - Echvi_1096 0.58 +1.0 1,256,412 - Echvi_1096 0.58 -1.4 1,256,434 + Echvi_1096 0.61 -2.5 1,256,502 + Echvi_1096 0.68 +0.8 1,256,502 + Echvi_1096 0.68 -0.2 1,256,756 + -1.3 1,256,757 - +0.4 1,256,771 + +0.2 1,256,772 - +0.5 1,256,788 + +0.5 1,256,789 - -1.8 1,256,808 + +1.1 1,256,822 + +0.8 1,256,865 - +0.1 1,256,865 - -0.8 1,256,865 - -0.4 1,256,977 - Echvi_1097 0.17 -0.9 1,257,095 + Echvi_1097 0.28 +0.0 1,257,095 + Echvi_1097 0.28 -2.0 1,257,096 - Echvi_1097 0.28 +2.0 1,257,096 - Echvi_1097 0.28 -0.7 1,257,098 + Echvi_1097 0.28 -1.0 1,257,098 + Echvi_1097 0.28 +0.5 1,257,099 - Echvi_1097 0.29 -1.6 1,257,099 - Echvi_1097 0.29 +0.9 1,257,100 + Echvi_1097 0.29 -0.6 1,257,100 + Echvi_1097 0.29 -0.6 1,257,100 + Echvi_1097 0.29 -2.1 1,257,101 - Echvi_1097 0.29 +0.4 1,257,101 - Echvi_1097 0.29 +1.4 1,257,101 - Echvi_1097 0.29 +0.6 1,257,139 - Echvi_1097 0.32 -0.0 1,257,139 - Echvi_1097 0.32 -0.4 1,257,241 - Echvi_1097 0.42 +0.2 1,257,433 + Echvi_1097 0.59 +0.0 1,257,515 + Echvi_1097 0.67 -0.8 1,257,556 + Echvi_1097 0.70 -0.5 1,257,556 + Echvi_1097 0.70 -1.0 1,257,556 + Echvi_1097 0.70 +0.7 1,257,556 + Echvi_1097 0.70 +0.1 1,257,556 + Echvi_1097 0.70 -0.5 1,257,556 + Echvi_1097 0.70 -2.3 1,257,556 + Echvi_1097 0.70 -1.2 1,257,557 - Echvi_1097 0.71 +0.1 1,257,558 + Echvi_1097 0.71 +0.5 1,257,559 - Echvi_1097 0.71 +0.4 1,257,600 - Echvi_1097 0.74 -1.9 1,257,694 + Echvi_1097 0.83 -0.9 1,257,695 - Echvi_1097 0.83 -0.0 1,257,695 - Echvi_1097 0.83 -1.5 1,257,728 + Echvi_1097 0.86 -0.7 1,257,732 + Echvi_1097 0.87 +0.4 1,257,733 - Echvi_1097 0.87 +0.3 1,257,733 - Echvi_1097 0.87 +0.7 1,257,843 + -0.7 1,257,844 - -2.1 1,257,920 - +0.1 1,257,933 + +0.5 1,257,934 - -2.0 1,257,957 + -2.2 1,257,958 - -0.5 1,257,958 - -0.6 1,257,996 + +1.6 1,257,997 - -0.0 1,257,997 - -3.2 1,258,015 + -0.4 1,258,084 - Echvi_1098 0.13 +0.0 1,258,171 + Echvi_1098 0.20 +0.4 1,258,182 + Echvi_1098 0.20 -0.4 1,258,182 + Echvi_1098 0.20 -0.2 1,258,183 - Echvi_1098 0.20 -1.3 1,258,183 - Echvi_1098 0.20 -0.8 1,258,183 - Echvi_1098 0.20 +0.2 1,258,191 + Echvi_1098 0.21 -0.0 1,258,191 + Echvi_1098 0.21 -0.0 1,258,191 + Echvi_1098 0.21 -0.8 1,258,192 - Echvi_1098 0.21 +0.4 1,258,192 - Echvi_1098 0.21 -0.3 1,258,220 - Echvi_1098 0.23 -0.1 1,258,308 + Echvi_1098 0.29 +0.8 1,258,309 - Echvi_1098 0.29 +0.0 1,258,472 + Echvi_1098 0.41 -0.3 1,258,473 - Echvi_1098 0.41 -0.7 1,258,479 + Echvi_1098 0.42 +0.0 1,258,479 + Echvi_1098 0.42 +0.1 1,258,480 - Echvi_1098 0.42 -1.0 1,258,541 + Echvi_1098 0.46 +0.1 1,258,549 - Echvi_1098 0.47 -0.3 1,258,549 - Echvi_1098 0.47 +0.3 1,258,554 + Echvi_1098 0.47 +0.5 1,258,554 + Echvi_1098 0.47 -0.6 1,258,555 - Echvi_1098 0.47 -2.0 1,258,555 - Echvi_1098 0.47 -0.7 1,258,555 - Echvi_1098 0.47 -0.3 1,258,555 - Echvi_1098 0.47 -0.6 1,258,607 + Echvi_1098 0.51 +1.1 1,258,653 + Echvi_1098 0.54 +0.9 1,258,689 + Echvi_1098 0.57 -0.6 1,258,702 - Echvi_1098 0.58 +1.7 1,258,702 - Echvi_1098 0.58 -0.7 1,258,702 - Echvi_1098 0.58 +0.4 1,258,760 - Echvi_1098 0.62 -2.2 1,258,760 - Echvi_1098 0.62 -2.4 1,258,762 - Echvi_1098 0.62 -0.6 1,258,828 + Echvi_1098 0.67 +0.8 1,258,873 + Echvi_1098 0.70 +0.6 1,258,874 - Echvi_1098 0.70 -1.3
Or see this region's nucleotide sequence