Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0695

Experiment: m.b. Thallium(I) acetate 0.05 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntEchvi_0694 and Echvi_0695 are separated by 441 nucleotidesEchvi_0695 and Echvi_0696 are separated by 153 nucleotides Echvi_0694: Echvi_0694 - S-adenosylmethionine synthetase, at 783,514 to 784,767 _0694 Echvi_0695: Echvi_0695 - UDP-glucose--hexose-1-phosphate uridylyltransferase (EC 2.7.7.12) (from data), at 785,209 to 786,252 _0695 Echvi_0696: Echvi_0696 - galactokinase, at 786,406 to 787,557 _0696 Position (kb) 785 786 787Strain fitness (log2 ratio) -2 -1 0 1 2at 784.875 kb on - strandat 784.877 kb on - strandat 784.877 kb on - strandat 784.877 kb on - strandat 785.013 kb on + strandat 785.064 kb on - strandat 785.072 kb on + strandat 785.072 kb on + strandat 785.073 kb on - strandat 785.073 kb on - strandat 785.079 kb on + strandat 785.079 kb on + strandat 785.114 kb on + strandat 785.114 kb on + strandat 785.115 kb on - strandat 785.115 kb on - strandat 785.120 kb on - strandat 785.120 kb on - strandat 785.120 kb on - strandat 785.137 kb on - strandat 785.137 kb on - strandat 785.195 kb on + strandat 785.195 kb on + strandat 785.196 kb on - strandat 785.204 kb on - strandat 785.211 kb on - strandat 785.217 kb on + strandat 785.217 kb on + strandat 785.217 kb on + strandat 785.217 kb on + strandat 785.217 kb on + strandat 785.218 kb on - strandat 785.218 kb on - strandat 785.218 kb on - strandat 785.219 kb on + strandat 785.219 kb on + strandat 785.219 kb on + strandat 785.219 kb on + strandat 785.219 kb on + strandat 785.219 kb on + strandat 785.219 kb on + strandat 785.219 kb on + strandat 785.219 kb on + strandat 785.219 kb on + strandat 785.220 kb on - strandat 785.220 kb on - strandat 785.220 kb on - strandat 785.220 kb on - strandat 785.220 kb on - strandat 785.335 kb on + strand, within Echvi_0695at 785.349 kb on - strand, within Echvi_0695at 785.526 kb on + strand, within Echvi_0695at 785.527 kb on - strand, within Echvi_0695at 785.536 kb on - strand, within Echvi_0695at 785.613 kb on + strand, within Echvi_0695at 785.613 kb on + strand, within Echvi_0695at 785.613 kb on + strand, within Echvi_0695at 785.614 kb on - strand, within Echvi_0695at 785.614 kb on - strand, within Echvi_0695at 785.614 kb on - strand, within Echvi_0695at 785.614 kb on - strand, within Echvi_0695at 785.639 kb on + strand, within Echvi_0695at 785.639 kb on + strand, within Echvi_0695at 785.645 kb on + strand, within Echvi_0695at 785.646 kb on - strand, within Echvi_0695at 785.646 kb on - strand, within Echvi_0695at 785.658 kb on + strand, within Echvi_0695at 785.659 kb on - strand, within Echvi_0695at 785.661 kb on + strand, within Echvi_0695at 785.661 kb on + strand, within Echvi_0695at 785.661 kb on + strand, within Echvi_0695at 785.661 kb on + strand, within Echvi_0695at 785.661 kb on + strand, within Echvi_0695at 785.661 kb on + strand, within Echvi_0695at 785.661 kb on + strand, within Echvi_0695at 785.661 kb on + strand, within Echvi_0695at 785.662 kb on - strand, within Echvi_0695at 785.662 kb on - strand, within Echvi_0695at 785.662 kb on - strand, within Echvi_0695at 785.662 kb on - strand, within Echvi_0695at 785.662 kb on - strand, within Echvi_0695at 785.681 kb on + strand, within Echvi_0695at 785.681 kb on + strand, within Echvi_0695at 785.682 kb on - strand, within Echvi_0695at 785.682 kb on - strand, within Echvi_0695at 785.682 kb on - strand, within Echvi_0695at 785.815 kb on - strand, within Echvi_0695at 785.854 kb on + strand, within Echvi_0695at 785.855 kb on - strand, within Echvi_0695at 785.855 kb on - strand, within Echvi_0695at 785.872 kb on - strand, within Echvi_0695at 785.882 kb on - strand, within Echvi_0695at 786.035 kb on + strand, within Echvi_0695at 786.035 kb on + strand, within Echvi_0695at 786.035 kb on + strand, within Echvi_0695at 786.035 kb on + strand, within Echvi_0695at 786.036 kb on - strand, within Echvi_0695at 786.036 kb on - strand, within Echvi_0695at 786.036 kb on - strand, within Echvi_0695at 786.036 kb on - strand, within Echvi_0695at 786.036 kb on - strand, within Echvi_0695at 786.210 kb on + strandat 786.210 kb on + strandat 786.212 kb on + strandat 786.213 kb on - strandat 786.219 kb on + strandat 786.219 kb on + strandat 786.219 kb on + strandat 786.219 kb on + strandat 786.220 kb on - strandat 786.220 kb on - strandat 786.220 kb on - strandat 786.220 kb on - strandat 786.225 kb on + strandat 786.226 kb on - strandat 786.260 kb on + strandat 786.276 kb on + strandat 786.276 kb on + strandat 786.277 kb on - strandat 786.306 kb on + strandat 786.376 kb on + strandat 786.376 kb on + strandat 786.398 kb on + strandat 786.416 kb on - strandat 786.643 kb on + strand, within Echvi_0696at 786.671 kb on + strand, within Echvi_0696at 786.671 kb on + strand, within Echvi_0696at 786.868 kb on + strand, within Echvi_0696at 786.869 kb on - strand, within Echvi_0696

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.05 mg/ml
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784,875 - -0.4
784,877 - +1.0
784,877 - -0.9
784,877 - -1.6
785,013 + +1.4
785,064 - -0.2
785,072 + +0.6
785,072 + +0.0
785,073 - -0.5
785,073 - +0.9
785,079 + -1.3
785,079 + -0.6
785,114 + -0.4
785,114 + -2.2
785,115 - +0.5
785,115 - -1.5
785,120 - -1.6
785,120 - -0.2
785,120 - -1.6
785,137 - -0.2
785,137 - +0.4
785,195 + +0.6
785,195 + +0.5
785,196 - +0.4
785,204 - -0.9
785,211 - -1.8
785,217 + +0.4
785,217 + -1.3
785,217 + -1.2
785,217 + -1.3
785,217 + +1.1
785,218 - +0.3
785,218 - -1.5
785,218 - +0.6
785,219 + +0.6
785,219 + +0.1
785,219 + +0.3
785,219 + +0.1
785,219 + +0.4
785,219 + -0.7
785,219 + +0.3
785,219 + -0.6
785,219 + -0.4
785,219 + -0.6
785,220 - -1.1
785,220 - -0.3
785,220 - -1.3
785,220 - -0.6
785,220 - +1.4
785,335 + Echvi_0695 0.12 -0.6
785,349 - Echvi_0695 0.13 +0.4
785,526 + Echvi_0695 0.30 -0.9
785,527 - Echvi_0695 0.30 -1.0
785,536 - Echvi_0695 0.31 +1.0
785,613 + Echvi_0695 0.39 +1.3
785,613 + Echvi_0695 0.39 +0.3
785,613 + Echvi_0695 0.39 -1.3
785,614 - Echvi_0695 0.39 -0.9
785,614 - Echvi_0695 0.39 -2.4
785,614 - Echvi_0695 0.39 +0.2
785,614 - Echvi_0695 0.39 -0.1
785,639 + Echvi_0695 0.41 +0.2
785,639 + Echvi_0695 0.41 -0.2
785,645 + Echvi_0695 0.42 -1.3
785,646 - Echvi_0695 0.42 -0.0
785,646 - Echvi_0695 0.42 -0.7
785,658 + Echvi_0695 0.43 +0.2
785,659 - Echvi_0695 0.43 -0.8
785,661 + Echvi_0695 0.43 +0.1
785,661 + Echvi_0695 0.43 -0.1
785,661 + Echvi_0695 0.43 -0.5
785,661 + Echvi_0695 0.43 +0.2
785,661 + Echvi_0695 0.43 -1.1
785,661 + Echvi_0695 0.43 -0.1
785,661 + Echvi_0695 0.43 -0.9
785,661 + Echvi_0695 0.43 +0.3
785,662 - Echvi_0695 0.43 -1.0
785,662 - Echvi_0695 0.43 -1.5
785,662 - Echvi_0695 0.43 +0.9
785,662 - Echvi_0695 0.43 +0.9
785,662 - Echvi_0695 0.43 +0.6
785,681 + Echvi_0695 0.45 -2.7
785,681 + Echvi_0695 0.45 +1.3
785,682 - Echvi_0695 0.45 +0.7
785,682 - Echvi_0695 0.45 -0.8
785,682 - Echvi_0695 0.45 +0.1
785,815 - Echvi_0695 0.58 -1.1
785,854 + Echvi_0695 0.62 -1.8
785,855 - Echvi_0695 0.62 -0.1
785,855 - Echvi_0695 0.62 +1.9
785,872 - Echvi_0695 0.64 -1.1
785,882 - Echvi_0695 0.64 -0.9
786,035 + Echvi_0695 0.79 -0.0
786,035 + Echvi_0695 0.79 +0.3
786,035 + Echvi_0695 0.79 +1.0
786,035 + Echvi_0695 0.79 +0.0
786,036 - Echvi_0695 0.79 -0.8
786,036 - Echvi_0695 0.79 -1.1
786,036 - Echvi_0695 0.79 -0.8
786,036 - Echvi_0695 0.79 +1.4
786,036 - Echvi_0695 0.79 +0.7
786,210 + +0.2
786,210 + -0.7
786,212 + +1.2
786,213 - -1.9
786,219 + +0.4
786,219 + -1.1
786,219 + -0.1
786,219 + +0.8
786,220 - +0.5
786,220 - -0.7
786,220 - -0.3
786,220 - -0.7
786,225 + +0.1
786,226 - -1.6
786,260 + +0.1
786,276 + +0.7
786,276 + +0.4
786,277 - +0.1
786,306 + +0.4
786,376 + -0.7
786,376 + -0.3
786,398 + +1.0
786,416 - -0.5
786,643 + Echvi_0696 0.21 -1.5
786,671 + Echvi_0696 0.23 -1.6
786,671 + Echvi_0696 0.23 -0.1
786,868 + Echvi_0696 0.40 -0.5
786,869 - Echvi_0696 0.40 -1.4

Or see this region's nucleotide sequence