Experiment: MS_media no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2281 and EX28DRAFT_2282 are separated by 12 nucleotides EX28DRAFT_2282 and EX28DRAFT_2283 are separated by 0 nucleotides EX28DRAFT_2283 and EX28DRAFT_2284 overlap by 4 nucleotides
EX28DRAFT_2281: EX28DRAFT_2281 - K+-transporting ATPase, B subunit, at 2,305,014 to 2,307,062
_2281
EX28DRAFT_2282: EX28DRAFT_2282 - K+-transporting ATPase, C subunit, at 2,307,075 to 2,307,650
_2282
EX28DRAFT_2283: EX28DRAFT_2283 - Osmosensitive K+ channel histidine kinase, at 2,307,651 to 2,310,338
_2283
EX28DRAFT_2284: EX28DRAFT_2284 - Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain, at 2,310,335 to 2,311,012
_2284
Position (kb)
2307
2308
2309
2310
2311 Strain fitness (log2 ratio)
-1
0
1
2 at 2306.672 kb on + strand, within EX28DRAFT_2281 at 2306.772 kb on + strand, within EX28DRAFT_2281 at 2306.875 kb on + strand at 2306.895 kb on - strand at 2306.934 kb on + strand at 2306.934 kb on + strand at 2306.935 kb on - strand at 2306.935 kb on - strand at 2306.936 kb on + strand at 2306.936 kb on + strand at 2306.982 kb on + strand at 2307.060 kb on + strand at 2307.096 kb on - strand at 2307.097 kb on + strand at 2307.098 kb on - strand at 2307.304 kb on - strand, within EX28DRAFT_2282 at 2307.648 kb on + strand at 2307.649 kb on - strand at 2307.812 kb on + strand at 2307.813 kb on - strand at 2307.814 kb on + strand at 2307.830 kb on - strand at 2308.033 kb on + strand, within EX28DRAFT_2283 at 2308.033 kb on + strand, within EX28DRAFT_2283 at 2308.033 kb on + strand, within EX28DRAFT_2283 at 2308.034 kb on - strand, within EX28DRAFT_2283 at 2308.042 kb on + strand, within EX28DRAFT_2283 at 2308.239 kb on + strand, within EX28DRAFT_2283 at 2308.240 kb on - strand, within EX28DRAFT_2283 at 2308.394 kb on + strand, within EX28DRAFT_2283 at 2308.476 kb on - strand, within EX28DRAFT_2283 at 2308.504 kb on - strand, within EX28DRAFT_2283 at 2308.504 kb on - strand, within EX28DRAFT_2283 at 2308.626 kb on - strand, within EX28DRAFT_2283 at 2308.886 kb on + strand, within EX28DRAFT_2283 at 2308.958 kb on - strand, within EX28DRAFT_2283 at 2309.040 kb on - strand, within EX28DRAFT_2283 at 2309.074 kb on + strand, within EX28DRAFT_2283 at 2309.074 kb on + strand, within EX28DRAFT_2283 at 2309.075 kb on - strand, within EX28DRAFT_2283 at 2309.079 kb on + strand, within EX28DRAFT_2283 at 2309.080 kb on - strand, within EX28DRAFT_2283 at 2309.080 kb on - strand, within EX28DRAFT_2283 at 2309.080 kb on - strand, within EX28DRAFT_2283 at 2309.120 kb on - strand, within EX28DRAFT_2283 at 2309.196 kb on + strand, within EX28DRAFT_2283 at 2309.196 kb on + strand, within EX28DRAFT_2283 at 2309.265 kb on - strand, within EX28DRAFT_2283 at 2309.790 kb on - strand, within EX28DRAFT_2283 at 2309.819 kb on + strand, within EX28DRAFT_2283 at 2309.931 kb on - strand, within EX28DRAFT_2283 at 2309.962 kb on + strand, within EX28DRAFT_2283 at 2310.028 kb on - strand, within EX28DRAFT_2283 at 2310.028 kb on - strand, within EX28DRAFT_2283 at 2310.137 kb on + strand at 2310.322 kb on + strand at 2310.322 kb on + strand at 2310.373 kb on + strand at 2310.448 kb on - strand, within EX28DRAFT_2284 at 2310.450 kb on + strand, within EX28DRAFT_2284 at 2310.450 kb on + strand, within EX28DRAFT_2284 at 2310.450 kb on + strand, within EX28DRAFT_2284 at 2310.451 kb on - strand, within EX28DRAFT_2284 at 2310.864 kb on + strand, within EX28DRAFT_2284 at 2310.865 kb on - strand, within EX28DRAFT_2284 at 2310.915 kb on + strand, within EX28DRAFT_2284 at 2310.916 kb on - strand, within EX28DRAFT_2284 at 2310.916 kb on - strand, within EX28DRAFT_2284 at 2310.918 kb on - strand, within EX28DRAFT_2284 at 2310.918 kb on - strand, within EX28DRAFT_2284 at 2310.919 kb on + strand, within EX28DRAFT_2284 at 2310.919 kb on + strand, within EX28DRAFT_2284 at 2310.919 kb on + strand, within EX28DRAFT_2284 at 2310.919 kb on + strand, within EX28DRAFT_2284 at 2310.972 kb on + strand at 2311.119 kb on - strand at 2311.321 kb on + strand at 2311.322 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media no stress control remove 2,306,672 + EX28DRAFT_2281 0.81 +0.8 2,306,772 + EX28DRAFT_2281 0.86 -0.3 2,306,875 + -0.9 2,306,895 - -0.2 2,306,934 + -0.3 2,306,934 + -0.0 2,306,935 - +0.2 2,306,935 - -0.4 2,306,936 + -0.7 2,306,936 + +0.1 2,306,982 + -0.6 2,307,060 + +0.2 2,307,096 - -0.2 2,307,097 + +0.2 2,307,098 - +0.4 2,307,304 - EX28DRAFT_2282 0.40 -0.1 2,307,648 + -0.3 2,307,649 - +0.8 2,307,812 + -0.3 2,307,813 - -1.1 2,307,814 + -0.8 2,307,830 - -0.5 2,308,033 + EX28DRAFT_2283 0.14 -0.7 2,308,033 + EX28DRAFT_2283 0.14 -0.0 2,308,033 + EX28DRAFT_2283 0.14 +0.8 2,308,034 - EX28DRAFT_2283 0.14 +0.4 2,308,042 + EX28DRAFT_2283 0.15 -0.1 2,308,239 + EX28DRAFT_2283 0.22 +0.4 2,308,240 - EX28DRAFT_2283 0.22 -0.5 2,308,394 + EX28DRAFT_2283 0.28 -0.0 2,308,476 - EX28DRAFT_2283 0.31 -0.5 2,308,504 - EX28DRAFT_2283 0.32 -0.4 2,308,504 - EX28DRAFT_2283 0.32 -0.1 2,308,626 - EX28DRAFT_2283 0.36 -0.9 2,308,886 + EX28DRAFT_2283 0.46 +0.6 2,308,958 - EX28DRAFT_2283 0.49 -0.1 2,309,040 - EX28DRAFT_2283 0.52 +0.5 2,309,074 + EX28DRAFT_2283 0.53 -0.0 2,309,074 + EX28DRAFT_2283 0.53 +0.8 2,309,075 - EX28DRAFT_2283 0.53 +1.9 2,309,079 + EX28DRAFT_2283 0.53 -0.2 2,309,080 - EX28DRAFT_2283 0.53 +0.1 2,309,080 - EX28DRAFT_2283 0.53 -0.3 2,309,080 - EX28DRAFT_2283 0.53 +0.0 2,309,120 - EX28DRAFT_2283 0.55 +0.5 2,309,196 + EX28DRAFT_2283 0.57 -0.4 2,309,196 + EX28DRAFT_2283 0.57 +0.2 2,309,265 - EX28DRAFT_2283 0.60 -0.2 2,309,790 - EX28DRAFT_2283 0.80 -0.6 2,309,819 + EX28DRAFT_2283 0.81 -1.2 2,309,931 - EX28DRAFT_2283 0.85 +0.2 2,309,962 + EX28DRAFT_2283 0.86 +0.0 2,310,028 - EX28DRAFT_2283 0.88 +1.4 2,310,028 - EX28DRAFT_2283 0.88 +0.2 2,310,137 + -0.5 2,310,322 + +0.4 2,310,322 + +0.1 2,310,373 + -0.2 2,310,448 - EX28DRAFT_2284 0.17 +0.6 2,310,450 + EX28DRAFT_2284 0.17 +0.5 2,310,450 + EX28DRAFT_2284 0.17 +0.7 2,310,450 + EX28DRAFT_2284 0.17 -0.2 2,310,451 - EX28DRAFT_2284 0.17 +0.1 2,310,864 + EX28DRAFT_2284 0.78 +1.5 2,310,865 - EX28DRAFT_2284 0.78 -0.2 2,310,915 + EX28DRAFT_2284 0.86 +0.9 2,310,916 - EX28DRAFT_2284 0.86 -0.2 2,310,916 - EX28DRAFT_2284 0.86 +0.6 2,310,918 - EX28DRAFT_2284 0.86 +0.1 2,310,918 - EX28DRAFT_2284 0.86 +0.1 2,310,919 + EX28DRAFT_2284 0.86 +0.1 2,310,919 + EX28DRAFT_2284 0.86 +0.1 2,310,919 + EX28DRAFT_2284 0.86 +0.2 2,310,919 + EX28DRAFT_2284 0.86 -0.3 2,310,972 + +0.2 2,311,119 - +0.5 2,311,321 + +0.4 2,311,322 - +1.4
Or see this region's nucleotide sequence