Experiment: MS_media no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_1749 and EX28DRAFT_1750 overlap by 14 nucleotides EX28DRAFT_1750 and EX28DRAFT_1751 overlap by 4 nucleotides
EX28DRAFT_1749: EX28DRAFT_1749 - succinylarginine dihydrolase (EC 3.5.3.23), at 1,763,247 to 1,764,572
_1749
EX28DRAFT_1750: EX28DRAFT_1750 - succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), at 1,764,559 to 1,766,046
_1750
EX28DRAFT_1751: EX28DRAFT_1751 - arginine N-succinyltransferase, at 1,766,043 to 1,767,077
_1751
Position (kb)
1764
1765
1766
1767 Strain fitness (log2 ratio)
-1
0
1 at 1763.808 kb on - strand, within EX28DRAFT_1749 at 1763.990 kb on + strand, within EX28DRAFT_1749 at 1763.991 kb on - strand, within EX28DRAFT_1749 at 1764.339 kb on - strand, within EX28DRAFT_1749 at 1764.520 kb on + strand at 1764.757 kb on - strand, within EX28DRAFT_1750 at 1764.856 kb on - strand, within EX28DRAFT_1750 at 1765.503 kb on + strand, within EX28DRAFT_1750 at 1765.557 kb on + strand, within EX28DRAFT_1750 at 1765.712 kb on + strand, within EX28DRAFT_1750 at 1765.782 kb on + strand, within EX28DRAFT_1750 at 1766.039 kb on - strand at 1766.039 kb on - strand at 1766.100 kb on - strand at 1766.189 kb on - strand, within EX28DRAFT_1751 at 1766.332 kb on + strand, within EX28DRAFT_1751 at 1766.333 kb on - strand, within EX28DRAFT_1751 at 1766.440 kb on + strand, within EX28DRAFT_1751 at 1766.441 kb on - strand, within EX28DRAFT_1751 at 1766.441 kb on - strand, within EX28DRAFT_1751 at 1766.441 kb on - strand, within EX28DRAFT_1751 at 1766.441 kb on - strand, within EX28DRAFT_1751 at 1766.444 kb on + strand, within EX28DRAFT_1751 at 1766.444 kb on + strand, within EX28DRAFT_1751 at 1766.444 kb on + strand, within EX28DRAFT_1751 at 1766.445 kb on - strand, within EX28DRAFT_1751 at 1766.500 kb on + strand, within EX28DRAFT_1751 at 1766.564 kb on - strand, within EX28DRAFT_1751 at 1766.637 kb on - strand, within EX28DRAFT_1751 at 1766.642 kb on + strand, within EX28DRAFT_1751 at 1766.642 kb on + strand, within EX28DRAFT_1751 at 1766.666 kb on - strand, within EX28DRAFT_1751 at 1766.767 kb on + strand, within EX28DRAFT_1751 at 1766.767 kb on + strand, within EX28DRAFT_1751
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media no stress control remove 1,763,808 - EX28DRAFT_1749 0.42 +0.4 1,763,990 + EX28DRAFT_1749 0.56 -0.3 1,763,991 - EX28DRAFT_1749 0.56 -0.8 1,764,339 - EX28DRAFT_1749 0.82 +0.1 1,764,520 + -0.3 1,764,757 - EX28DRAFT_1750 0.13 -0.6 1,764,856 - EX28DRAFT_1750 0.20 -0.4 1,765,503 + EX28DRAFT_1750 0.63 -1.7 1,765,557 + EX28DRAFT_1750 0.67 -0.1 1,765,712 + EX28DRAFT_1750 0.77 -1.4 1,765,782 + EX28DRAFT_1750 0.82 -1.1 1,766,039 - +0.8 1,766,039 - -0.9 1,766,100 - -0.5 1,766,189 - EX28DRAFT_1751 0.14 +0.1 1,766,332 + EX28DRAFT_1751 0.28 +0.0 1,766,333 - EX28DRAFT_1751 0.28 +0.3 1,766,440 + EX28DRAFT_1751 0.38 +0.0 1,766,441 - EX28DRAFT_1751 0.38 -0.2 1,766,441 - EX28DRAFT_1751 0.38 +0.4 1,766,441 - EX28DRAFT_1751 0.38 +0.1 1,766,441 - EX28DRAFT_1751 0.38 +0.5 1,766,444 + EX28DRAFT_1751 0.39 +0.2 1,766,444 + EX28DRAFT_1751 0.39 -0.1 1,766,444 + EX28DRAFT_1751 0.39 +0.1 1,766,445 - EX28DRAFT_1751 0.39 +1.3 1,766,500 + EX28DRAFT_1751 0.44 -0.2 1,766,564 - EX28DRAFT_1751 0.50 +0.1 1,766,637 - EX28DRAFT_1751 0.57 +1.2 1,766,642 + EX28DRAFT_1751 0.58 -0.7 1,766,642 + EX28DRAFT_1751 0.58 +0.1 1,766,666 - EX28DRAFT_1751 0.60 +0.3 1,766,767 + EX28DRAFT_1751 0.70 -0.2 1,766,767 + EX28DRAFT_1751 0.70 +0.5
Or see this region's nucleotide sequence