Strain Fitness in Enterobacter asburiae PDN3 around EX28DRAFT_1750

Experiment: MS_media no stress control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntEX28DRAFT_1749 and EX28DRAFT_1750 overlap by 14 nucleotidesEX28DRAFT_1750 and EX28DRAFT_1751 overlap by 4 nucleotides EX28DRAFT_1749: EX28DRAFT_1749 - succinylarginine dihydrolase (EC 3.5.3.23), at 1,763,247 to 1,764,572 _1749 EX28DRAFT_1750: EX28DRAFT_1750 - succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), at 1,764,559 to 1,766,046 _1750 EX28DRAFT_1751: EX28DRAFT_1751 - arginine N-succinyltransferase, at 1,766,043 to 1,767,077 _1751 Position (kb) 1764 1765 1766 1767Strain fitness (log2 ratio) -1 0 1at 1763.808 kb on - strand, within EX28DRAFT_1749at 1763.990 kb on + strand, within EX28DRAFT_1749at 1763.991 kb on - strand, within EX28DRAFT_1749at 1764.339 kb on - strand, within EX28DRAFT_1749at 1764.520 kb on + strandat 1764.757 kb on - strand, within EX28DRAFT_1750at 1764.856 kb on - strand, within EX28DRAFT_1750at 1765.503 kb on + strand, within EX28DRAFT_1750at 1765.557 kb on + strand, within EX28DRAFT_1750at 1765.712 kb on + strand, within EX28DRAFT_1750at 1765.782 kb on + strand, within EX28DRAFT_1750at 1766.039 kb on - strandat 1766.039 kb on - strandat 1766.100 kb on - strandat 1766.189 kb on - strand, within EX28DRAFT_1751at 1766.332 kb on + strand, within EX28DRAFT_1751at 1766.333 kb on - strand, within EX28DRAFT_1751at 1766.440 kb on + strand, within EX28DRAFT_1751at 1766.441 kb on - strand, within EX28DRAFT_1751at 1766.441 kb on - strand, within EX28DRAFT_1751at 1766.441 kb on - strand, within EX28DRAFT_1751at 1766.441 kb on - strand, within EX28DRAFT_1751at 1766.444 kb on + strand, within EX28DRAFT_1751at 1766.444 kb on + strand, within EX28DRAFT_1751at 1766.444 kb on + strand, within EX28DRAFT_1751at 1766.445 kb on - strand, within EX28DRAFT_1751at 1766.500 kb on + strand, within EX28DRAFT_1751at 1766.564 kb on - strand, within EX28DRAFT_1751at 1766.637 kb on - strand, within EX28DRAFT_1751at 1766.642 kb on + strand, within EX28DRAFT_1751at 1766.642 kb on + strand, within EX28DRAFT_1751at 1766.666 kb on - strand, within EX28DRAFT_1751at 1766.767 kb on + strand, within EX28DRAFT_1751at 1766.767 kb on + strand, within EX28DRAFT_1751

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Per-strain Table

Position Strand Gene LocusTag Fraction MS_media no stress control
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1,763,808 - EX28DRAFT_1749 0.42 +0.4
1,763,990 + EX28DRAFT_1749 0.56 -0.3
1,763,991 - EX28DRAFT_1749 0.56 -0.8
1,764,339 - EX28DRAFT_1749 0.82 +0.1
1,764,520 + -0.3
1,764,757 - EX28DRAFT_1750 0.13 -0.6
1,764,856 - EX28DRAFT_1750 0.20 -0.4
1,765,503 + EX28DRAFT_1750 0.63 -1.7
1,765,557 + EX28DRAFT_1750 0.67 -0.1
1,765,712 + EX28DRAFT_1750 0.77 -1.4
1,765,782 + EX28DRAFT_1750 0.82 -1.1
1,766,039 - +0.8
1,766,039 - -0.9
1,766,100 - -0.5
1,766,189 - EX28DRAFT_1751 0.14 +0.1
1,766,332 + EX28DRAFT_1751 0.28 +0.0
1,766,333 - EX28DRAFT_1751 0.28 +0.3
1,766,440 + EX28DRAFT_1751 0.38 +0.0
1,766,441 - EX28DRAFT_1751 0.38 -0.2
1,766,441 - EX28DRAFT_1751 0.38 +0.4
1,766,441 - EX28DRAFT_1751 0.38 +0.1
1,766,441 - EX28DRAFT_1751 0.38 +0.5
1,766,444 + EX28DRAFT_1751 0.39 +0.2
1,766,444 + EX28DRAFT_1751 0.39 -0.1
1,766,444 + EX28DRAFT_1751 0.39 +0.1
1,766,445 - EX28DRAFT_1751 0.39 +1.3
1,766,500 + EX28DRAFT_1751 0.44 -0.2
1,766,564 - EX28DRAFT_1751 0.50 +0.1
1,766,637 - EX28DRAFT_1751 0.57 +1.2
1,766,642 + EX28DRAFT_1751 0.58 -0.7
1,766,642 + EX28DRAFT_1751 0.58 +0.1
1,766,666 - EX28DRAFT_1751 0.60 +0.3
1,766,767 + EX28DRAFT_1751 0.70 -0.2
1,766,767 + EX28DRAFT_1751 0.70 +0.5

Or see this region's nucleotide sequence