Strain Fitness in Enterobacter asburiae PDN3 around EX28DRAFT_1491

Experiment: MS_media no stress control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntEX28DRAFT_1490 and EX28DRAFT_1491 are separated by 102 nucleotidesEX28DRAFT_1491 and EX28DRAFT_1492 overlap by 66 nucleotidesEX28DRAFT_1492 and EX28DRAFT_1493 are separated by 130 nucleotides EX28DRAFT_1490: EX28DRAFT_1490 - glycine betaine/L-proline transport ATP binding subunit, at 1,503,803 to 1,504,951 _1490 EX28DRAFT_1491: EX28DRAFT_1491 - Chloride channel protein EriC, at 1,505,054 to 1,506,364 _1491 EX28DRAFT_1492: EX28DRAFT_1492 - dethiobiotin synthase, at 1,506,299 to 1,506,994 _1492 EX28DRAFT_1493: EX28DRAFT_1493 - Transcriptional regulator/sugar kinase, at 1,507,125 to 1,508,345 _1493 Position (kb) 1505 1506 1507Strain fitness (log2 ratio) -1 0 1at 1504.135 kb on + strand, within EX28DRAFT_1490at 1504.612 kb on + strand, within EX28DRAFT_1490at 1504.649 kb on - strand, within EX28DRAFT_1490at 1504.815 kb on - strand, within EX28DRAFT_1490at 1504.826 kb on - strand, within EX28DRAFT_1490at 1504.886 kb on + strandat 1504.886 kb on + strandat 1504.887 kb on - strandat 1504.888 kb on + strandat 1504.899 kb on - strandat 1505.024 kb on + strandat 1505.024 kb on + strandat 1505.029 kb on + strandat 1505.030 kb on - strandat 1505.043 kb on - strandat 1505.059 kb on - strandat 1505.069 kb on - strandat 1505.072 kb on + strandat 1505.073 kb on - strandat 1505.073 kb on - strandat 1505.168 kb on + strandat 1505.342 kb on + strand, within EX28DRAFT_1491at 1505.570 kb on + strand, within EX28DRAFT_1491at 1505.571 kb on - strand, within EX28DRAFT_1491at 1506.059 kb on - strand, within EX28DRAFT_1491at 1506.174 kb on + strand, within EX28DRAFT_1491at 1506.202 kb on + strand, within EX28DRAFT_1491at 1506.202 kb on + strand, within EX28DRAFT_1491at 1506.202 kb on + strand, within EX28DRAFT_1491at 1506.203 kb on - strand, within EX28DRAFT_1491at 1506.354 kb on + strandat 1506.355 kb on - strandat 1506.724 kb on + strand, within EX28DRAFT_1492at 1506.725 kb on - strand, within EX28DRAFT_1492at 1506.886 kb on - strand, within EX28DRAFT_1492at 1506.961 kb on + strandat 1506.961 kb on + strandat 1506.961 kb on + strandat 1506.961 kb on + strandat 1506.962 kb on - strandat 1506.962 kb on - strandat 1506.973 kb on + strandat 1507.028 kb on + strandat 1507.043 kb on + strandat 1507.043 kb on + strandat 1507.043 kb on + strandat 1507.093 kb on - strandat 1507.162 kb on + strandat 1507.162 kb on + strandat 1507.163 kb on - strandat 1507.163 kb on - strandat 1507.163 kb on - strandat 1507.163 kb on - strandat 1507.236 kb on - strandat 1507.361 kb on + strand, within EX28DRAFT_1493

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Per-strain Table

Position Strand Gene LocusTag Fraction MS_media no stress control
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1,504,135 + EX28DRAFT_1490 0.29 +0.1
1,504,612 + EX28DRAFT_1490 0.70 -0.5
1,504,649 - EX28DRAFT_1490 0.74 +0.3
1,504,815 - EX28DRAFT_1490 0.88 +0.9
1,504,826 - EX28DRAFT_1490 0.89 +0.2
1,504,886 + -0.7
1,504,886 + +0.2
1,504,887 - +0.2
1,504,888 + -0.4
1,504,899 - +0.4
1,505,024 + -0.0
1,505,024 + -0.2
1,505,029 + +0.5
1,505,030 - +0.3
1,505,043 - -0.1
1,505,059 - +0.0
1,505,069 - -0.4
1,505,072 + -0.3
1,505,073 - -1.4
1,505,073 - -0.5
1,505,168 + -0.4
1,505,342 + EX28DRAFT_1491 0.22 -0.1
1,505,570 + EX28DRAFT_1491 0.39 -0.1
1,505,571 - EX28DRAFT_1491 0.39 -0.0
1,506,059 - EX28DRAFT_1491 0.77 -1.2
1,506,174 + EX28DRAFT_1491 0.85 -0.9
1,506,202 + EX28DRAFT_1491 0.88 +0.2
1,506,202 + EX28DRAFT_1491 0.88 -0.0
1,506,202 + EX28DRAFT_1491 0.88 -1.3
1,506,203 - EX28DRAFT_1491 0.88 -0.4
1,506,354 + -0.5
1,506,355 - +0.6
1,506,724 + EX28DRAFT_1492 0.61 -0.0
1,506,725 - EX28DRAFT_1492 0.61 -0.4
1,506,886 - EX28DRAFT_1492 0.84 -0.1
1,506,961 + -0.4
1,506,961 + -0.1
1,506,961 + -1.2
1,506,961 + -1.7
1,506,962 - -0.4
1,506,962 - +0.9
1,506,973 + -0.6
1,507,028 + -0.9
1,507,043 + -0.8
1,507,043 + -0.1
1,507,043 + +0.0
1,507,093 - -0.3
1,507,162 + -0.3
1,507,162 + -0.3
1,507,163 - +1.4
1,507,163 - +0.4
1,507,163 - +0.2
1,507,163 - -0.0
1,507,236 - -0.2
1,507,361 + EX28DRAFT_1493 0.19 +0.1

Or see this region's nucleotide sequence