Strain Fitness in Enterobacter asburiae PDN3 around EX28DRAFT_0497

Experiment: MS_media no stress control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntEX28DRAFT_0495 and EX28DRAFT_0496 are separated by 74 nucleotidesEX28DRAFT_0496 and EX28DRAFT_0497 overlap by 1 nucleotidesEX28DRAFT_0497 and EX28DRAFT_0498 overlap by 4 nucleotides EX28DRAFT_0495: EX28DRAFT_0495 - capsular exopolysaccharide family, at 486,114 to 488,276 _0495 EX28DRAFT_0496: EX28DRAFT_0496 - colanic acid biosynthesis glycosyl transferase WcaA, at 488,351 to 489,214 _0496 EX28DRAFT_0497: EX28DRAFT_0497 - colanic acid biosynthesis acetyltransferase WcaB, at 489,214 to 489,705 _0497 EX28DRAFT_0498: EX28DRAFT_0498 - colanic acid biosynthesis glycosyl transferase WcaC, at 489,702 to 490,919 _0498 Position (kb) 489 490Strain fitness (log2 ratio) -1 0 1at 488.244 kb on + strandat 488.256 kb on + strandat 488.259 kb on - strandat 488.274 kb on + strandat 488.402 kb on + strandat 488.403 kb on - strandat 488.565 kb on - strand, within EX28DRAFT_0496at 488.565 kb on - strand, within EX28DRAFT_0496at 488.582 kb on - strand, within EX28DRAFT_0496at 488.617 kb on + strand, within EX28DRAFT_0496at 488.618 kb on - strand, within EX28DRAFT_0496at 488.732 kb on + strand, within EX28DRAFT_0496at 488.744 kb on + strand, within EX28DRAFT_0496at 488.744 kb on + strand, within EX28DRAFT_0496at 488.745 kb on - strand, within EX28DRAFT_0496at 488.745 kb on - strand, within EX28DRAFT_0496at 488.745 kb on - strand, within EX28DRAFT_0496at 488.808 kb on - strand, within EX28DRAFT_0496at 488.825 kb on + strand, within EX28DRAFT_0496at 488.825 kb on + strand, within EX28DRAFT_0496at 488.919 kb on - strand, within EX28DRAFT_0496at 488.949 kb on - strand, within EX28DRAFT_0496at 489.094 kb on + strand, within EX28DRAFT_0496at 489.130 kb on + strandat 489.130 kb on + strandat 489.212 kb on + strandat 489.212 kb on + strandat 489.213 kb on - strandat 489.330 kb on + strand, within EX28DRAFT_0497at 489.606 kb on + strand, within EX28DRAFT_0497at 489.609 kb on + strand, within EX28DRAFT_0497at 489.699 kb on + strandat 489.699 kb on + strandat 489.700 kb on - strandat 489.700 kb on - strandat 489.720 kb on - strandat 489.720 kb on - strandat 489.725 kb on - strandat 489.806 kb on + strandat 490.017 kb on + strand, within EX28DRAFT_0498at 490.017 kb on + strand, within EX28DRAFT_0498at 490.018 kb on - strand, within EX28DRAFT_0498at 490.018 kb on - strand, within EX28DRAFT_0498at 490.136 kb on + strand, within EX28DRAFT_0498at 490.163 kb on + strand, within EX28DRAFT_0498at 490.163 kb on + strand, within EX28DRAFT_0498at 490.284 kb on - strand, within EX28DRAFT_0498at 490.284 kb on - strand, within EX28DRAFT_0498at 490.349 kb on + strand, within EX28DRAFT_0498at 490.369 kb on + strand, within EX28DRAFT_0498at 490.652 kb on + strand, within EX28DRAFT_0498

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Per-strain Table

Position Strand Gene LocusTag Fraction MS_media no stress control
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488,244 + -0.3
488,256 + +0.1
488,259 - -0.2
488,274 + +0.6
488,402 + +0.8
488,403 - +0.3
488,565 - EX28DRAFT_0496 0.25 -0.3
488,565 - EX28DRAFT_0496 0.25 +0.1
488,582 - EX28DRAFT_0496 0.27 -0.1
488,617 + EX28DRAFT_0496 0.31 -0.1
488,618 - EX28DRAFT_0496 0.31 +0.2
488,732 + EX28DRAFT_0496 0.44 +0.0
488,744 + EX28DRAFT_0496 0.45 -0.0
488,744 + EX28DRAFT_0496 0.45 +1.2
488,745 - EX28DRAFT_0496 0.46 -0.4
488,745 - EX28DRAFT_0496 0.46 -0.3
488,745 - EX28DRAFT_0496 0.46 -0.5
488,808 - EX28DRAFT_0496 0.53 +0.6
488,825 + EX28DRAFT_0496 0.55 -0.0
488,825 + EX28DRAFT_0496 0.55 -0.2
488,919 - EX28DRAFT_0496 0.66 -0.3
488,949 - EX28DRAFT_0496 0.69 -0.2
489,094 + EX28DRAFT_0496 0.86 -0.1
489,130 + +0.1
489,130 + -0.4
489,212 + +0.1
489,212 + +0.2
489,213 - -0.1
489,330 + EX28DRAFT_0497 0.24 -1.7
489,606 + EX28DRAFT_0497 0.80 +0.2
489,609 + EX28DRAFT_0497 0.80 -1.0
489,699 + -0.0
489,699 + -0.7
489,700 - +0.0
489,700 - +0.2
489,720 - +0.3
489,720 - +0.2
489,725 - +0.3
489,806 + +0.2
490,017 + EX28DRAFT_0498 0.26 +0.4
490,017 + EX28DRAFT_0498 0.26 -0.5
490,018 - EX28DRAFT_0498 0.26 -0.1
490,018 - EX28DRAFT_0498 0.26 +0.2
490,136 + EX28DRAFT_0498 0.36 -0.6
490,163 + EX28DRAFT_0498 0.38 -0.6
490,163 + EX28DRAFT_0498 0.38 +0.1
490,284 - EX28DRAFT_0498 0.48 +1.0
490,284 - EX28DRAFT_0498 0.48 +0.7
490,349 + EX28DRAFT_0498 0.53 +0.3
490,369 + EX28DRAFT_0498 0.55 +1.0
490,652 + EX28DRAFT_0498 0.78 -0.3

Or see this region's nucleotide sequence