Experiment: MS_media no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0225 and EX28DRAFT_0226 are separated by 42 nucleotides EX28DRAFT_0226 and EX28DRAFT_0227 are separated by 22 nucleotides EX28DRAFT_0227 and EX28DRAFT_0228 are separated by 217 nucleotides EX28DRAFT_0228 and EX28DRAFT_0229 are separated by 41 nucleotides
EX28DRAFT_0225: EX28DRAFT_0225 - glutamyl-tRNA synthetase, bacterial family, at 176,638 to 178,053
_0225
EX28DRAFT_0226: EX28DRAFT_0226 - Putative transcription regulator (DUF1323), at 178,096 to 178,467
_0226
EX28DRAFT_0227: EX28DRAFT_0227 - Putative transcription regulator (DUF1323), at 178,490 to 178,852
_0227
EX28DRAFT_0228: EX28DRAFT_0228 - tRNA, at 179,070 to 179,145
_0228
EX28DRAFT_0229: EX28DRAFT_0229 - tRNA, at 179,187 to 179,262
_0229
Position (kb) 178
179 Strain fitness (log2 ratio) -2
-1
0
1 at 178.051 kb on + strand at 178.052 kb on - strand at 178.056 kb on - strand at 178.097 kb on + strand at 178.142 kb on - strand, within EX28DRAFT_0226 at 178.160 kb on - strand, within EX28DRAFT_0226 at 178.247 kb on + strand, within EX28DRAFT_0226 at 178.247 kb on + strand, within EX28DRAFT_0226 at 178.312 kb on - strand, within EX28DRAFT_0226 at 178.314 kb on + strand, within EX28DRAFT_0226 at 178.314 kb on + strand, within EX28DRAFT_0226 at 178.314 kb on + strand, within EX28DRAFT_0226 at 178.315 kb on - strand, within EX28DRAFT_0226 at 178.338 kb on + strand, within EX28DRAFT_0226 at 178.471 kb on - strand at 178.489 kb on - strand at 178.624 kb on + strand, within EX28DRAFT_0227 at 178.624 kb on + strand, within EX28DRAFT_0227 at 178.624 kb on + strand, within EX28DRAFT_0227 at 178.624 kb on + strand, within EX28DRAFT_0227 at 178.625 kb on - strand, within EX28DRAFT_0227 at 178.712 kb on + strand, within EX28DRAFT_0227 at 178.783 kb on + strand, within EX28DRAFT_0227 at 178.783 kb on + strand, within EX28DRAFT_0227 at 178.784 kb on - strand, within EX28DRAFT_0227 at 178.804 kb on - strand, within EX28DRAFT_0227 at 178.896 kb on - strand at 178.896 kb on - strand at 178.898 kb on - strand at 179.035 kb on + strand at 179.064 kb on + strand at 179.064 kb on + strand at 179.077 kb on + strand at 179.077 kb on + strand at 179.077 kb on + strand at 179.135 kb on + strand, within EX28DRAFT_0228 at 179.179 kb on + strand at 179.179 kb on + strand at 179.179 kb on + strand at 179.180 kb on - strand at 179.180 kb on - strand at 179.269 kb on + strand at 179.347 kb on + strand at 179.348 kb on - strand at 179.348 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media no stress control remove 178,051 + -0.3 178,052 - -0.3 178,056 - +0.6 178,097 + +0.4 178,142 - EX28DRAFT_0226 0.12 +0.4 178,160 - EX28DRAFT_0226 0.17 +0.5 178,247 + EX28DRAFT_0226 0.41 +0.2 178,247 + EX28DRAFT_0226 0.41 +0.3 178,312 - EX28DRAFT_0226 0.58 +1.1 178,314 + EX28DRAFT_0226 0.59 -0.3 178,314 + EX28DRAFT_0226 0.59 +0.4 178,314 + EX28DRAFT_0226 0.59 -1.4 178,315 - EX28DRAFT_0226 0.59 +0.5 178,338 + EX28DRAFT_0226 0.65 -0.0 178,471 - -0.0 178,489 - -1.1 178,624 + EX28DRAFT_0227 0.37 -0.2 178,624 + EX28DRAFT_0227 0.37 +0.4 178,624 + EX28DRAFT_0227 0.37 -0.4 178,624 + EX28DRAFT_0227 0.37 -0.2 178,625 - EX28DRAFT_0227 0.37 -0.5 178,712 + EX28DRAFT_0227 0.61 +0.0 178,783 + EX28DRAFT_0227 0.81 -0.8 178,783 + EX28DRAFT_0227 0.81 +0.1 178,784 - EX28DRAFT_0227 0.81 -0.2 178,804 - EX28DRAFT_0227 0.87 +0.0 178,896 - -0.4 178,896 - +0.4 178,898 - +0.0 179,035 + +0.1 179,064 + -0.4 179,064 + -1.5 179,077 + -0.6 179,077 + -1.1 179,077 + -0.2 179,135 + EX28DRAFT_0228 0.86 -0.4 179,179 + +0.3 179,179 + -0.7 179,179 + +0.2 179,180 - -2.0 179,180 - -0.1 179,269 + -0.4 179,347 + -0.3 179,348 - +0.3 179,348 - +0.1
Or see this region's nucleotide sequence