Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_21115

Experiment: m.b. Thallium(I) acetate 0.0025 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_21110 and CA264_21115 are separated by 586 nucleotidesCA264_21115 and CA264_21120 are separated by 124 nucleotides CA264_21110: CA264_21110 - hypothetical protein, at 86,980 to 87,858 _21110 CA264_21115: CA264_21115 - dihydrolipoyl dehydrogenase, at 88,445 to 89,839 _21115 CA264_21120: CA264_21120 - ZIP family zinc transporter, at 89,964 to 90,704 _21120 Position (kb) 88 89 90Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 87.513 kb on + strand, within CA264_21110at 87.517 kb on + strand, within CA264_21110at 87.537 kb on + strand, within CA264_21110at 87.537 kb on + strand, within CA264_21110at 87.537 kb on + strand, within CA264_21110at 87.611 kb on + strand, within CA264_21110at 87.623 kb on - strand, within CA264_21110at 87.626 kb on + strand, within CA264_21110at 87.627 kb on - strand, within CA264_21110at 87.665 kb on + strand, within CA264_21110at 87.680 kb on - strand, within CA264_21110at 87.680 kb on - strand, within CA264_21110at 87.680 kb on - strand, within CA264_21110at 87.692 kb on - strand, within CA264_21110at 87.715 kb on + strand, within CA264_21110at 87.740 kb on - strand, within CA264_21110at 87.796 kb on - strandat 87.846 kb on - strandat 87.859 kb on - strandat 87.869 kb on - strandat 87.883 kb on + strandat 87.934 kb on - strandat 87.945 kb on + strandat 87.946 kb on - strandat 87.946 kb on - strandat 87.947 kb on + strandat 87.947 kb on + strandat 87.947 kb on + strandat 87.948 kb on - strandat 87.991 kb on + strandat 88.040 kb on + strandat 88.044 kb on + strandat 88.045 kb on - strandat 88.045 kb on - strandat 88.159 kb on + strandat 88.166 kb on - strandat 88.179 kb on - strandat 88.184 kb on - strandat 88.197 kb on + strandat 88.231 kb on + strandat 88.232 kb on - strandat 88.259 kb on - strandat 88.259 kb on - strandat 88.262 kb on + strandat 88.289 kb on - strandat 88.291 kb on + strandat 88.297 kb on + strandat 88.301 kb on + strandat 88.301 kb on + strandat 88.302 kb on - strandat 88.395 kb on + strandat 88.396 kb on - strandat 88.451 kb on + strandat 88.458 kb on + strandat 88.458 kb on + strandat 88.458 kb on + strandat 88.458 kb on + strandat 88.459 kb on - strandat 88.459 kb on - strandat 88.459 kb on - strandat 88.459 kb on - strandat 88.515 kb on + strandat 88.516 kb on - strandat 88.582 kb on + strandat 88.583 kb on - strandat 88.583 kb on - strandat 88.583 kb on - strandat 88.584 kb on + strandat 88.622 kb on + strand, within CA264_21115at 88.666 kb on + strand, within CA264_21115at 88.703 kb on - strand, within CA264_21115at 88.728 kb on + strand, within CA264_21115at 88.728 kb on + strand, within CA264_21115at 88.729 kb on - strand, within CA264_21115at 88.729 kb on - strand, within CA264_21115at 88.742 kb on + strand, within CA264_21115at 88.794 kb on + strand, within CA264_21115at 88.794 kb on + strand, within CA264_21115at 88.816 kb on - strand, within CA264_21115at 88.948 kb on - strand, within CA264_21115at 88.948 kb on - strand, within CA264_21115at 88.948 kb on - strand, within CA264_21115at 88.972 kb on + strand, within CA264_21115at 88.976 kb on - strand, within CA264_21115at 88.976 kb on - strand, within CA264_21115at 89.015 kb on + strand, within CA264_21115at 89.038 kb on - strand, within CA264_21115at 89.038 kb on - strand, within CA264_21115at 89.038 kb on - strand, within CA264_21115at 89.087 kb on - strand, within CA264_21115at 89.128 kb on + strand, within CA264_21115at 89.203 kb on + strand, within CA264_21115at 89.204 kb on - strand, within CA264_21115at 89.299 kb on - strand, within CA264_21115at 89.304 kb on + strand, within CA264_21115at 89.305 kb on - strand, within CA264_21115at 89.305 kb on - strand, within CA264_21115at 89.325 kb on + strand, within CA264_21115at 89.325 kb on + strand, within CA264_21115at 89.361 kb on + strand, within CA264_21115at 89.362 kb on - strand, within CA264_21115at 89.362 kb on - strand, within CA264_21115at 89.362 kb on - strand, within CA264_21115at 89.362 kb on - strand, within CA264_21115at 89.363 kb on + strand, within CA264_21115at 89.363 kb on + strand, within CA264_21115at 89.363 kb on + strand, within CA264_21115at 89.363 kb on + strand, within CA264_21115at 89.364 kb on - strand, within CA264_21115at 89.364 kb on - strand, within CA264_21115at 89.364 kb on - strand, within CA264_21115at 89.392 kb on + strand, within CA264_21115at 89.393 kb on - strand, within CA264_21115at 89.509 kb on - strand, within CA264_21115at 89.540 kb on - strand, within CA264_21115at 89.559 kb on - strand, within CA264_21115at 89.559 kb on - strand, within CA264_21115at 89.560 kb on + strand, within CA264_21115at 89.560 kb on + strand, within CA264_21115at 89.561 kb on - strand, within CA264_21115at 89.603 kb on - strand, within CA264_21115at 89.603 kb on - strand, within CA264_21115at 89.626 kb on + strand, within CA264_21115at 89.627 kb on - strand, within CA264_21115at 89.627 kb on - strand, within CA264_21115at 89.674 kb on + strand, within CA264_21115at 89.674 kb on + strand, within CA264_21115at 89.675 kb on - strand, within CA264_21115at 89.675 kb on - strand, within CA264_21115at 89.675 kb on - strand, within CA264_21115at 89.679 kb on + strand, within CA264_21115at 89.679 kb on + strand, within CA264_21115at 89.783 kb on + strandat 89.856 kb on - strandat 89.856 kb on - strandat 89.934 kb on + strandat 89.936 kb on + strandat 89.936 kb on + strandat 89.937 kb on - strandat 89.937 kb on - strandat 89.937 kb on - strandat 89.956 kb on - strandat 89.956 kb on - strandat 89.977 kb on + strandat 89.977 kb on + strandat 89.977 kb on + strandat 89.989 kb on + strandat 90.047 kb on + strand, within CA264_21120at 90.047 kb on + strand, within CA264_21120at 90.083 kb on + strand, within CA264_21120at 90.283 kb on - strand, within CA264_21120at 90.320 kb on + strand, within CA264_21120at 90.320 kb on + strand, within CA264_21120at 90.321 kb on - strand, within CA264_21120at 90.425 kb on + strand, within CA264_21120at 90.586 kb on + strand, within CA264_21120at 90.586 kb on + strand, within CA264_21120at 90.587 kb on - strand, within CA264_21120at 90.605 kb on - strand, within CA264_21120at 90.674 kb on + strandat 90.679 kb on + strandat 90.680 kb on - strandat 90.680 kb on - strandat 90.680 kb on - strandat 90.702 kb on + strandat 90.710 kb on - strandat 90.743 kb on + strandat 90.829 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.0025 mg/ml
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87,513 + CA264_21110 0.61 -1.8
87,517 + CA264_21110 0.61 -1.4
87,537 + CA264_21110 0.63 -1.2
87,537 + CA264_21110 0.63 -0.2
87,537 + CA264_21110 0.63 -1.4
87,611 + CA264_21110 0.72 +0.4
87,623 - CA264_21110 0.73 -0.3
87,626 + CA264_21110 0.73 -1.3
87,627 - CA264_21110 0.74 +0.7
87,665 + CA264_21110 0.78 -0.9
87,680 - CA264_21110 0.80 -0.0
87,680 - CA264_21110 0.80 +1.2
87,680 - CA264_21110 0.80 +1.3
87,692 - CA264_21110 0.81 -0.6
87,715 + CA264_21110 0.84 -0.2
87,740 - CA264_21110 0.86 -0.9
87,796 - +0.1
87,846 - -1.1
87,859 - +0.7
87,869 - +0.8
87,883 + -1.4
87,934 - -1.4
87,945 + -0.8
87,946 - -0.6
87,946 - -0.9
87,947 + -1.6
87,947 + -0.3
87,947 + -1.6
87,948 - +0.9
87,991 + -0.6
88,040 + -1.1
88,044 + +1.2
88,045 - +0.6
88,045 - +0.1
88,159 + -0.5
88,166 - +1.8
88,179 - -0.2
88,184 - -1.6
88,197 + -1.8
88,231 + -0.8
88,232 - +0.0
88,259 - +1.4
88,259 - -0.2
88,262 + -0.9
88,289 - -0.0
88,291 + -1.4
88,297 + -1.4
88,301 + -1.9
88,301 + -0.3
88,302 - +0.3
88,395 + -1.3
88,396 - +0.8
88,451 + -0.8
88,458 + +1.2
88,458 + -0.4
88,458 + +0.2
88,458 + -1.0
88,459 - +0.7
88,459 - +0.3
88,459 - +0.9
88,459 - -0.2
88,515 + -0.1
88,516 - +0.1
88,582 + -1.1
88,583 - +2.0
88,583 - +0.5
88,583 - -0.3
88,584 + -1.7
88,622 + CA264_21115 0.13 -2.2
88,666 + CA264_21115 0.16 -2.1
88,703 - CA264_21115 0.18 -0.6
88,728 + CA264_21115 0.20 -3.0
88,728 + CA264_21115 0.20 -1.0
88,729 - CA264_21115 0.20 -1.7
88,729 - CA264_21115 0.20 +0.5
88,742 + CA264_21115 0.21 -0.0
88,794 + CA264_21115 0.25 +0.3
88,794 + CA264_21115 0.25 +0.2
88,816 - CA264_21115 0.27 +1.3
88,948 - CA264_21115 0.36 +0.2
88,948 - CA264_21115 0.36 +2.3
88,948 - CA264_21115 0.36 +0.4
88,972 + CA264_21115 0.38 -1.8
88,976 - CA264_21115 0.38 -0.6
88,976 - CA264_21115 0.38 +1.7
89,015 + CA264_21115 0.41 +1.2
89,038 - CA264_21115 0.43 -0.3
89,038 - CA264_21115 0.43 -0.3
89,038 - CA264_21115 0.43 -0.7
89,087 - CA264_21115 0.46 -0.6
89,128 + CA264_21115 0.49 +0.3
89,203 + CA264_21115 0.54 -0.5
89,204 - CA264_21115 0.54 -1.0
89,299 - CA264_21115 0.61 +0.6
89,304 + CA264_21115 0.62 -1.1
89,305 - CA264_21115 0.62 +0.5
89,305 - CA264_21115 0.62 +1.2
89,325 + CA264_21115 0.63 -0.3
89,325 + CA264_21115 0.63 -0.5
89,361 + CA264_21115 0.66 -1.6
89,362 - CA264_21115 0.66 -1.7
89,362 - CA264_21115 0.66 +0.3
89,362 - CA264_21115 0.66 +0.2
89,362 - CA264_21115 0.66 +0.4
89,363 + CA264_21115 0.66 +0.9
89,363 + CA264_21115 0.66 -1.4
89,363 + CA264_21115 0.66 -1.0
89,363 + CA264_21115 0.66 -0.2
89,364 - CA264_21115 0.66 +1.2
89,364 - CA264_21115 0.66 +0.6
89,364 - CA264_21115 0.66 -0.2
89,392 + CA264_21115 0.68 -2.0
89,393 - CA264_21115 0.68 +0.1
89,509 - CA264_21115 0.76 -1.6
89,540 - CA264_21115 0.78 +0.8
89,559 - CA264_21115 0.80 -0.1
89,559 - CA264_21115 0.80 -0.4
89,560 + CA264_21115 0.80 -0.2
89,560 + CA264_21115 0.80 -0.6
89,561 - CA264_21115 0.80 +0.4
89,603 - CA264_21115 0.83 +1.9
89,603 - CA264_21115 0.83 +0.8
89,626 + CA264_21115 0.85 -0.6
89,627 - CA264_21115 0.85 -0.3
89,627 - CA264_21115 0.85 -0.5
89,674 + CA264_21115 0.88 -0.7
89,674 + CA264_21115 0.88 -2.0
89,675 - CA264_21115 0.88 +0.1
89,675 - CA264_21115 0.88 +0.6
89,675 - CA264_21115 0.88 -1.2
89,679 + CA264_21115 0.88 -0.3
89,679 + CA264_21115 0.88 -0.5
89,783 + -0.4
89,856 - -0.5
89,856 - -0.3
89,934 + +2.7
89,936 + -0.5
89,936 + -0.9
89,937 - -0.2
89,937 - +1.5
89,937 - -0.5
89,956 - -0.5
89,956 - -0.1
89,977 + -2.7
89,977 + -0.3
89,977 + +0.1
89,989 + -0.3
90,047 + CA264_21120 0.11 -0.5
90,047 + CA264_21120 0.11 -0.3
90,083 + CA264_21120 0.16 -1.0
90,283 - CA264_21120 0.43 -0.0
90,320 + CA264_21120 0.48 +0.0
90,320 + CA264_21120 0.48 -0.3
90,321 - CA264_21120 0.48 +0.1
90,425 + CA264_21120 0.62 -2.5
90,586 + CA264_21120 0.84 +0.6
90,586 + CA264_21120 0.84 +0.9
90,587 - CA264_21120 0.84 -0.9
90,605 - CA264_21120 0.87 +0.6
90,674 + -0.9
90,679 + +1.7
90,680 - +1.5
90,680 - +0.5
90,680 - +0.9
90,702 + +1.0
90,710 - -0.6
90,743 + +0.8
90,829 + +0.2

Or see this region's nucleotide sequence