Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_21040

Experiment: m.b. Thallium(I) acetate 0.0025 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_21035 and CA264_21040 overlap by 4 nucleotidesCA264_21040 and CA264_21045 are separated by 850 nucleotides CA264_21035: CA264_21035 - mobilization protein, at 67,705 to 69,672 _21035 CA264_21040: CA264_21040 - transcriptional regulator, at 69,669 to 70,019 _21040 CA264_21045: CA264_21045 - hypothetical protein, at 70,870 to 71,220 _21045 Position (kb) 69 70 71Strain fitness (log2 ratio) -3 -2 -1 0 1at 68.686 kb on + strand, within CA264_21035at 68.735 kb on + strand, within CA264_21035at 68.736 kb on - strand, within CA264_21035at 68.749 kb on - strand, within CA264_21035at 68.758 kb on + strand, within CA264_21035at 68.758 kb on + strand, within CA264_21035at 68.759 kb on - strand, within CA264_21035at 68.830 kb on + strand, within CA264_21035at 68.830 kb on + strand, within CA264_21035at 68.830 kb on + strand, within CA264_21035at 68.830 kb on + strand, within CA264_21035at 68.831 kb on - strand, within CA264_21035at 68.832 kb on + strand, within CA264_21035at 68.832 kb on + strand, within CA264_21035at 68.833 kb on - strand, within CA264_21035at 68.883 kb on + strand, within CA264_21035at 69.109 kb on - strand, within CA264_21035at 69.115 kb on + strand, within CA264_21035at 69.116 kb on - strand, within CA264_21035at 69.116 kb on - strand, within CA264_21035at 69.119 kb on + strand, within CA264_21035at 69.119 kb on + strand, within CA264_21035at 69.119 kb on + strand, within CA264_21035at 69.120 kb on - strand, within CA264_21035at 69.120 kb on - strand, within CA264_21035at 69.164 kb on + strand, within CA264_21035at 69.164 kb on + strand, within CA264_21035at 69.164 kb on + strand, within CA264_21035at 69.164 kb on + strand, within CA264_21035at 69.165 kb on - strand, within CA264_21035at 69.192 kb on - strand, within CA264_21035at 69.257 kb on + strand, within CA264_21035at 69.258 kb on - strand, within CA264_21035at 69.279 kb on + strand, within CA264_21035at 69.315 kb on + strand, within CA264_21035at 69.361 kb on - strand, within CA264_21035at 69.449 kb on + strand, within CA264_21035at 69.449 kb on + strand, within CA264_21035at 69.469 kb on + strand, within CA264_21035at 69.469 kb on + strand, within CA264_21035at 69.470 kb on - strand, within CA264_21035at 69.481 kb on + strandat 69.481 kb on + strandat 69.530 kb on + strandat 69.550 kb on + strandat 69.631 kb on - strandat 69.662 kb on + strandat 69.669 kb on - strandat 69.676 kb on + strandat 69.682 kb on + strandat 69.778 kb on + strand, within CA264_21040at 69.823 kb on + strand, within CA264_21040at 69.823 kb on + strand, within CA264_21040at 69.997 kb on + strandat 70.017 kb on + strandat 70.018 kb on - strandat 70.051 kb on - strandat 70.060 kb on + strandat 70.063 kb on + strandat 70.063 kb on + strandat 70.065 kb on + strandat 70.160 kb on - strandat 70.199 kb on - strandat 70.343 kb on + strandat 70.343 kb on + strandat 70.344 kb on - strandat 70.361 kb on - strandat 70.370 kb on + strandat 70.370 kb on + strandat 70.391 kb on + strandat 70.399 kb on + strandat 70.400 kb on - strandat 70.402 kb on - strandat 70.420 kb on - strandat 70.458 kb on - strandat 70.500 kb on + strandat 70.500 kb on + strandat 70.500 kb on + strandat 70.515 kb on + strandat 70.533 kb on - strandat 70.571 kb on - strandat 70.574 kb on - strandat 70.579 kb on + strandat 70.581 kb on + strandat 70.582 kb on - strandat 70.582 kb on - strandat 70.582 kb on - strandat 70.585 kb on + strandat 70.585 kb on + strandat 70.586 kb on - strandat 70.586 kb on - strandat 70.586 kb on - strandat 70.587 kb on + strandat 70.587 kb on + strandat 70.587 kb on + strandat 70.588 kb on - strandat 70.588 kb on - strandat 70.631 kb on - strandat 70.631 kb on - strandat 70.634 kb on + strandat 70.635 kb on - strandat 70.635 kb on - strandat 70.638 kb on - strandat 70.638 kb on - strandat 70.641 kb on + strandat 70.641 kb on + strandat 70.642 kb on - strandat 70.671 kb on + strandat 70.671 kb on + strandat 70.672 kb on - strandat 70.691 kb on - strandat 70.701 kb on + strandat 70.701 kb on + strandat 70.702 kb on - strandat 70.705 kb on + strandat 70.706 kb on - strandat 70.706 kb on - strandat 70.712 kb on + strandat 70.712 kb on + strandat 70.712 kb on + strandat 70.712 kb on + strandat 70.713 kb on - strandat 70.720 kb on + strandat 70.721 kb on - strandat 70.727 kb on - strandat 70.727 kb on - strandat 70.743 kb on + strandat 70.744 kb on - strandat 70.744 kb on - strandat 70.744 kb on - strandat 70.759 kb on - strandat 70.803 kb on + strandat 70.804 kb on - strandat 70.824 kb on + strandat 70.837 kb on - strandat 70.871 kb on + strandat 70.876 kb on + strandat 70.877 kb on - strandat 70.880 kb on + strandat 70.881 kb on - strandat 70.974 kb on + strand, within CA264_21045

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.0025 mg/ml
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68,686 + CA264_21035 0.50 -1.5
68,735 + CA264_21035 0.52 +0.3
68,736 - CA264_21035 0.52 -0.9
68,749 - CA264_21035 0.53 -2.5
68,758 + CA264_21035 0.54 +0.2
68,758 + CA264_21035 0.54 +0.1
68,759 - CA264_21035 0.54 -0.5
68,830 + CA264_21035 0.57 -0.2
68,830 + CA264_21035 0.57 -0.9
68,830 + CA264_21035 0.57 +0.2
68,830 + CA264_21035 0.57 +0.1
68,831 - CA264_21035 0.57 -0.8
68,832 + CA264_21035 0.57 +0.3
68,832 + CA264_21035 0.57 -0.1
68,833 - CA264_21035 0.57 -0.2
68,883 + CA264_21035 0.60 -1.6
69,109 - CA264_21035 0.71 -1.0
69,115 + CA264_21035 0.72 +0.3
69,116 - CA264_21035 0.72 -0.7
69,116 - CA264_21035 0.72 -0.4
69,119 + CA264_21035 0.72 +0.2
69,119 + CA264_21035 0.72 +1.2
69,119 + CA264_21035 0.72 +0.3
69,120 - CA264_21035 0.72 +0.7
69,120 - CA264_21035 0.72 -0.3
69,164 + CA264_21035 0.74 +0.2
69,164 + CA264_21035 0.74 +0.1
69,164 + CA264_21035 0.74 -0.2
69,164 + CA264_21035 0.74 -0.7
69,165 - CA264_21035 0.74 +1.0
69,192 - CA264_21035 0.76 -1.3
69,257 + CA264_21035 0.79 +0.4
69,258 - CA264_21035 0.79 -0.5
69,279 + CA264_21035 0.80 -0.2
69,315 + CA264_21035 0.82 +0.7
69,361 - CA264_21035 0.84 -0.1
69,449 + CA264_21035 0.89 +0.6
69,449 + CA264_21035 0.89 -0.0
69,469 + CA264_21035 0.90 +1.1
69,469 + CA264_21035 0.90 -0.4
69,470 - CA264_21035 0.90 -0.7
69,481 + +1.1
69,481 + +0.5
69,530 + +0.9
69,550 + -1.3
69,631 - -0.1
69,662 + -0.0
69,669 - +0.3
69,676 + +0.7
69,682 + -0.4
69,778 + CA264_21040 0.31 -0.2
69,823 + CA264_21040 0.44 -0.4
69,823 + CA264_21040 0.44 -1.6
69,997 + -1.0
70,017 + -0.7
70,018 - +0.5
70,051 - -0.1
70,060 + -1.3
70,063 + -1.8
70,063 + -0.2
70,065 + +0.4
70,160 - -1.5
70,199 - +0.4
70,343 + -0.9
70,343 + -0.6
70,344 - -1.1
70,361 - -0.7
70,370 + -0.2
70,370 + -0.0
70,391 + -0.7
70,399 + -0.1
70,400 - -0.8
70,402 - +0.6
70,420 - -0.4
70,458 - +0.9
70,500 + -0.3
70,500 + +1.2
70,500 + -0.9
70,515 + +0.1
70,533 - +0.2
70,571 - +0.8
70,574 - +0.4
70,579 + -1.1
70,581 + -0.7
70,582 - +0.4
70,582 - -0.2
70,582 - +0.5
70,585 + -1.4
70,585 + -0.6
70,586 - +0.6
70,586 - +1.7
70,586 - +0.0
70,587 + -0.9
70,587 + -0.4
70,587 + -1.6
70,588 - +1.1
70,588 - +0.4
70,631 - -0.1
70,631 - +0.5
70,634 + -0.6
70,635 - -1.1
70,635 - +1.0
70,638 - -0.3
70,638 - +0.2
70,641 + -1.4
70,641 + -2.5
70,642 - +0.2
70,671 + -0.3
70,671 + -1.9
70,672 - +0.5
70,691 - +1.0
70,701 + -0.9
70,701 + -1.6
70,702 - -0.8
70,705 + +0.2
70,706 - +0.7
70,706 - +0.8
70,712 + -1.4
70,712 + -1.9
70,712 + -1.7
70,712 + -2.5
70,713 - -1.5
70,720 + -1.1
70,721 - -0.5
70,727 - +0.6
70,727 - -0.0
70,743 + -3.1
70,744 - +0.2
70,744 - +0.6
70,744 - +0.5
70,759 - +0.6
70,803 + +0.1
70,804 - -0.2
70,824 + -2.7
70,837 - -0.9
70,871 + -0.5
70,876 + -1.8
70,877 - +1.0
70,880 + -0.4
70,881 - +0.2
70,974 + CA264_21045 0.30 -3.3

Or see this region's nucleotide sequence