Experiment: m.b. Thallium(I) acetate 0.0025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_20065 and CA264_20070 overlap by 4 nucleotides CA264_20070 and CA264_20075 are separated by 111 nucleotides CA264_20075 and CA264_20080 are separated by 527 nucleotides
CA264_20065: CA264_20065 - biotin--[acetyl-CoA-carboxylase] ligase, at 4,624,528 to 4,625,277
_20065
CA264_20070: CA264_20070 - hypothetical protein, at 4,625,274 to 4,625,846
_20070
CA264_20075: CA264_20075 - hypothetical protein, at 4,625,958 to 4,627,481
_20075
CA264_20080: CA264_20080 - T9SS C-terminal target domain-containing protein, at 4,628,009 to 4,628,596
_20080
Position (kb)
4625
4626
4627
4628 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 4625.272 kb on - strand at 4625.385 kb on + strand, within CA264_20070 at 4625.478 kb on + strand, within CA264_20070 at 4625.478 kb on + strand, within CA264_20070 at 4625.479 kb on - strand, within CA264_20070 at 4625.596 kb on + strand, within CA264_20070 at 4625.596 kb on + strand, within CA264_20070 at 4625.596 kb on + strand, within CA264_20070 at 4625.596 kb on + strand, within CA264_20070 at 4625.597 kb on - strand, within CA264_20070 at 4625.597 kb on - strand, within CA264_20070 at 4625.656 kb on - strand, within CA264_20070 at 4625.656 kb on - strand, within CA264_20070 at 4625.665 kb on + strand, within CA264_20070 at 4625.665 kb on + strand, within CA264_20070 at 4625.673 kb on - strand, within CA264_20070 at 4625.688 kb on + strand, within CA264_20070 at 4625.689 kb on - strand, within CA264_20070 at 4625.689 kb on - strand, within CA264_20070 at 4625.773 kb on + strand, within CA264_20070 at 4625.773 kb on + strand, within CA264_20070 at 4625.774 kb on - strand, within CA264_20070 at 4625.774 kb on - strand, within CA264_20070 at 4625.794 kb on - strand at 4625.832 kb on + strand at 4625.835 kb on + strand at 4625.836 kb on - strand at 4625.836 kb on - strand at 4625.846 kb on + strand at 4625.847 kb on - strand at 4625.856 kb on + strand at 4625.856 kb on + strand at 4625.866 kb on + strand at 4625.866 kb on + strand at 4625.907 kb on + strand at 4625.929 kb on + strand at 4625.959 kb on + strand at 4625.960 kb on - strand at 4625.964 kb on + strand at 4625.965 kb on - strand at 4626.013 kb on + strand at 4626.013 kb on + strand at 4626.013 kb on + strand at 4626.014 kb on - strand at 4626.014 kb on - strand at 4626.014 kb on - strand at 4626.014 kb on - strand at 4626.016 kb on + strand at 4626.016 kb on + strand at 4626.016 kb on + strand at 4626.017 kb on - strand at 4626.017 kb on - strand at 4626.052 kb on - strand at 4626.129 kb on - strand, within CA264_20075 at 4626.129 kb on - strand, within CA264_20075 at 4626.163 kb on + strand, within CA264_20075 at 4626.163 kb on + strand, within CA264_20075 at 4626.164 kb on - strand, within CA264_20075 at 4626.182 kb on + strand, within CA264_20075 at 4626.187 kb on + strand, within CA264_20075 at 4626.187 kb on + strand, within CA264_20075 at 4626.188 kb on - strand, within CA264_20075 at 4626.189 kb on + strand, within CA264_20075 at 4626.189 kb on + strand, within CA264_20075 at 4626.190 kb on - strand, within CA264_20075 at 4626.190 kb on - strand, within CA264_20075 at 4626.190 kb on - strand, within CA264_20075 at 4626.190 kb on - strand, within CA264_20075 at 4626.234 kb on + strand, within CA264_20075 at 4626.286 kb on + strand, within CA264_20075 at 4626.287 kb on - strand, within CA264_20075 at 4626.317 kb on + strand, within CA264_20075 at 4626.325 kb on + strand, within CA264_20075 at 4626.360 kb on + strand, within CA264_20075 at 4626.456 kb on + strand, within CA264_20075 at 4626.456 kb on + strand, within CA264_20075 at 4626.456 kb on + strand, within CA264_20075 at 4626.456 kb on + strand, within CA264_20075 at 4626.456 kb on + strand, within CA264_20075 at 4626.512 kb on + strand, within CA264_20075 at 4626.513 kb on - strand, within CA264_20075 at 4626.513 kb on - strand, within CA264_20075 at 4626.533 kb on + strand, within CA264_20075 at 4626.533 kb on + strand, within CA264_20075 at 4626.533 kb on + strand, within CA264_20075 at 4626.534 kb on - strand, within CA264_20075 at 4626.534 kb on - strand, within CA264_20075 at 4626.559 kb on - strand, within CA264_20075 at 4626.881 kb on + strand, within CA264_20075 at 4627.121 kb on - strand, within CA264_20075 at 4627.232 kb on - strand, within CA264_20075 at 4627.285 kb on + strand, within CA264_20075 at 4627.286 kb on - strand, within CA264_20075 at 4627.286 kb on - strand, within CA264_20075 at 4627.322 kb on + strand, within CA264_20075 at 4627.323 kb on - strand, within CA264_20075 at 4627.323 kb on - strand, within CA264_20075 at 4627.344 kb on + strand at 4627.363 kb on + strand at 4627.364 kb on - strand at 4627.364 kb on - strand at 4627.462 kb on - strand at 4627.467 kb on + strand at 4627.468 kb on - strand at 4627.469 kb on + strand at 4627.470 kb on - strand at 4627.472 kb on - strand at 4627.508 kb on - strand at 4627.525 kb on + strand at 4627.570 kb on + strand at 4627.618 kb on + strand at 4627.619 kb on - strand at 4627.619 kb on - strand at 4627.620 kb on + strand at 4627.621 kb on - strand at 4627.621 kb on - strand at 4627.723 kb on - strand at 4627.858 kb on - strand at 4627.928 kb on + strand at 4627.949 kb on + strand at 4627.958 kb on + strand at 4627.964 kb on + strand at 4627.964 kb on + strand at 4627.964 kb on + strand at 4627.967 kb on + strand at 4627.968 kb on - strand at 4627.969 kb on + strand at 4627.976 kb on - strand at 4627.976 kb on - strand at 4627.989 kb on + strand at 4628.009 kb on - strand at 4628.029 kb on + strand at 4628.029 kb on + strand at 4628.029 kb on + strand at 4628.030 kb on - strand at 4628.031 kb on + strand at 4628.108 kb on + strand, within CA264_20080 at 4628.108 kb on + strand, within CA264_20080 at 4628.108 kb on + strand, within CA264_20080 at 4628.228 kb on + strand, within CA264_20080 at 4628.228 kb on + strand, within CA264_20080 at 4628.228 kb on + strand, within CA264_20080 at 4628.229 kb on - strand, within CA264_20080 at 4628.229 kb on - strand, within CA264_20080 at 4628.229 kb on - strand, within CA264_20080 at 4628.288 kb on + strand, within CA264_20080 at 4628.288 kb on + strand, within CA264_20080 at 4628.288 kb on + strand, within CA264_20080 at 4628.289 kb on - strand, within CA264_20080 at 4628.300 kb on - strand, within CA264_20080 at 4628.420 kb on + strand, within CA264_20080 at 4628.421 kb on - strand, within CA264_20080 at 4628.421 kb on - strand, within CA264_20080 at 4628.422 kb on + strand, within CA264_20080 at 4628.422 kb on + strand, within CA264_20080 at 4628.446 kb on - strand, within CA264_20080
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.0025 mg/ml remove 4,625,272 - +1.9 4,625,385 + CA264_20070 0.19 -1.5 4,625,478 + CA264_20070 0.36 -1.6 4,625,478 + CA264_20070 0.36 -1.9 4,625,479 - CA264_20070 0.36 +1.1 4,625,596 + CA264_20070 0.56 +0.5 4,625,596 + CA264_20070 0.56 -1.2 4,625,596 + CA264_20070 0.56 -1.7 4,625,596 + CA264_20070 0.56 -1.1 4,625,597 - CA264_20070 0.56 +3.4 4,625,597 - CA264_20070 0.56 +0.2 4,625,656 - CA264_20070 0.67 +0.6 4,625,656 - CA264_20070 0.67 +1.4 4,625,665 + CA264_20070 0.68 -2.0 4,625,665 + CA264_20070 0.68 -1.5 4,625,673 - CA264_20070 0.70 +2.1 4,625,688 + CA264_20070 0.72 +1.4 4,625,689 - CA264_20070 0.72 +0.9 4,625,689 - CA264_20070 0.72 +1.5 4,625,773 + CA264_20070 0.87 +1.7 4,625,773 + CA264_20070 0.87 -0.3 4,625,774 - CA264_20070 0.87 +1.6 4,625,774 - CA264_20070 0.87 +2.3 4,625,794 - +1.1 4,625,832 + -1.1 4,625,835 + +1.4 4,625,836 - +1.9 4,625,836 - +0.4 4,625,846 + -1.7 4,625,847 - -0.4 4,625,856 + -3.3 4,625,856 + -0.9 4,625,866 + -1.2 4,625,866 + -0.7 4,625,907 + -2.3 4,625,929 + +0.2 4,625,959 + -0.4 4,625,960 - -0.2 4,625,964 + -1.0 4,625,965 - -1.1 4,626,013 + +0.7 4,626,013 + +0.4 4,626,013 + -0.5 4,626,014 - +0.4 4,626,014 - -1.0 4,626,014 - +0.1 4,626,014 - +0.4 4,626,016 + -0.0 4,626,016 + -1.0 4,626,016 + -1.1 4,626,017 - -1.1 4,626,017 - -0.2 4,626,052 - -1.3 4,626,129 - CA264_20075 0.11 +0.6 4,626,129 - CA264_20075 0.11 -0.7 4,626,163 + CA264_20075 0.13 -1.1 4,626,163 + CA264_20075 0.13 +0.8 4,626,164 - CA264_20075 0.14 -0.9 4,626,182 + CA264_20075 0.15 +0.5 4,626,187 + CA264_20075 0.15 +0.1 4,626,187 + CA264_20075 0.15 -1.1 4,626,188 - CA264_20075 0.15 -2.7 4,626,189 + CA264_20075 0.15 -0.6 4,626,189 + CA264_20075 0.15 -0.6 4,626,190 - CA264_20075 0.15 +0.1 4,626,190 - CA264_20075 0.15 +0.2 4,626,190 - CA264_20075 0.15 -1.1 4,626,190 - CA264_20075 0.15 -0.2 4,626,234 + CA264_20075 0.18 +0.2 4,626,286 + CA264_20075 0.22 -0.5 4,626,287 - CA264_20075 0.22 -1.4 4,626,317 + CA264_20075 0.24 +0.1 4,626,325 + CA264_20075 0.24 -1.0 4,626,360 + CA264_20075 0.26 +0.3 4,626,456 + CA264_20075 0.33 -2.3 4,626,456 + CA264_20075 0.33 -0.7 4,626,456 + CA264_20075 0.33 -0.2 4,626,456 + CA264_20075 0.33 +1.4 4,626,456 + CA264_20075 0.33 +0.4 4,626,512 + CA264_20075 0.36 -1.6 4,626,513 - CA264_20075 0.36 -2.2 4,626,513 - CA264_20075 0.36 -1.1 4,626,533 + CA264_20075 0.38 -1.3 4,626,533 + CA264_20075 0.38 -0.0 4,626,533 + CA264_20075 0.38 +0.1 4,626,534 - CA264_20075 0.38 -1.2 4,626,534 - CA264_20075 0.38 -1.7 4,626,559 - CA264_20075 0.39 -1.8 4,626,881 + CA264_20075 0.61 +0.6 4,627,121 - CA264_20075 0.76 +2.0 4,627,232 - CA264_20075 0.84 +0.1 4,627,285 + CA264_20075 0.87 -0.0 4,627,286 - CA264_20075 0.87 -0.2 4,627,286 - CA264_20075 0.87 +1.2 4,627,322 + CA264_20075 0.90 -1.0 4,627,323 - CA264_20075 0.90 -0.3 4,627,323 - CA264_20075 0.90 +1.8 4,627,344 + +0.6 4,627,363 + -0.4 4,627,364 - +0.2 4,627,364 - -0.6 4,627,462 - +1.1 4,627,467 + -0.3 4,627,468 - -0.3 4,627,469 + -0.8 4,627,470 - +0.2 4,627,472 - -1.9 4,627,508 - -0.8 4,627,525 + -0.1 4,627,570 + +0.5 4,627,618 + +0.6 4,627,619 - +1.4 4,627,619 - +0.2 4,627,620 + +1.5 4,627,621 - +1.6 4,627,621 - +0.1 4,627,723 - +0.1 4,627,858 - +1.4 4,627,928 + +0.4 4,627,949 + -0.2 4,627,958 + +1.0 4,627,964 + +0.3 4,627,964 + +0.8 4,627,964 + -0.4 4,627,967 + -0.1 4,627,968 - +1.6 4,627,969 + -0.2 4,627,976 - +2.0 4,627,976 - +1.9 4,627,989 + +1.1 4,628,009 - +1.6 4,628,029 + -0.7 4,628,029 + -1.8 4,628,029 + -1.0 4,628,030 - +2.0 4,628,031 + -0.2 4,628,108 + CA264_20080 0.17 -0.4 4,628,108 + CA264_20080 0.17 -0.8 4,628,108 + CA264_20080 0.17 -0.3 4,628,228 + CA264_20080 0.37 -0.3 4,628,228 + CA264_20080 0.37 -1.5 4,628,228 + CA264_20080 0.37 -0.5 4,628,229 - CA264_20080 0.37 +2.2 4,628,229 - CA264_20080 0.37 +1.3 4,628,229 - CA264_20080 0.37 +2.7 4,628,288 + CA264_20080 0.47 -1.5 4,628,288 + CA264_20080 0.47 -1.6 4,628,288 + CA264_20080 0.47 -0.7 4,628,289 - CA264_20080 0.48 +1.9 4,628,300 - CA264_20080 0.49 -0.0 4,628,420 + CA264_20080 0.70 -1.3 4,628,421 - CA264_20080 0.70 -0.0 4,628,421 - CA264_20080 0.70 +2.4 4,628,422 + CA264_20080 0.70 -0.8 4,628,422 + CA264_20080 0.70 -0.0 4,628,446 - CA264_20080 0.74 +1.7
Or see this region's nucleotide sequence