Experiment: m.b. Thallium(I) acetate 0.0025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_18675 and CA264_18680 are separated by 128 nucleotides CA264_18680 and CA264_18685 are separated by 78 nucleotides CA264_18685 and CA264_18690 are separated by 116 nucleotides CA264_18690 and CA264_18695 overlap by 4 nucleotides
CA264_18675: CA264_18675 - 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, at 4,339,046 to 4,339,543
_18675
CA264_18680: CA264_18680 - Fe-S assembly protein IscX, at 4,339,672 to 4,339,908
_18680
CA264_18685: CA264_18685 - ferredoxin, at 4,339,987 to 4,340,301
_18685
CA264_18690: CA264_18690 - hypothetical protein, at 4,340,418 to 4,341,197
_18690
CA264_18695: CA264_18695 - glycogen synthase, at 4,341,194 to 4,342,417
_18695
Position (kb) 4340
4341
4342 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4
5
6
7
8
9 at 4339.481 kb on + strand, within CA264_18675 at 4339.569 kb on + strand at 4339.574 kb on + strand at 4339.575 kb on - strand at 4339.634 kb on - strand at 4339.908 kb on + strand at 4339.930 kb on - strand at 4339.943 kb on + strand at 4339.981 kb on - strand at 4340.334 kb on - strand at 4340.334 kb on - strand at 4340.347 kb on - strand at 4340.443 kb on - strand at 4341.189 kb on + strand at 4341.209 kb on - strand at 4341.209 kb on - strand at 4341.270 kb on + strand at 4341.310 kb on - strand at 4341.327 kb on + strand, within CA264_18695 at 4341.377 kb on + strand, within CA264_18695 at 4341.378 kb on - strand, within CA264_18695 at 4341.423 kb on + strand, within CA264_18695 at 4341.423 kb on + strand, within CA264_18695 at 4341.566 kb on + strand, within CA264_18695 at 4341.567 kb on - strand, within CA264_18695 at 4341.693 kb on + strand, within CA264_18695 at 4341.698 kb on + strand, within CA264_18695 at 4341.698 kb on + strand, within CA264_18695 at 4341.699 kb on - strand, within CA264_18695 at 4341.810 kb on + strand, within CA264_18695 at 4341.810 kb on + strand, within CA264_18695 at 4341.810 kb on + strand, within CA264_18695 at 4341.811 kb on - strand, within CA264_18695 at 4341.914 kb on + strand, within CA264_18695 at 4341.915 kb on - strand, within CA264_18695 at 4341.915 kb on - strand, within CA264_18695 at 4341.915 kb on - strand, within CA264_18695 at 4341.929 kb on + strand, within CA264_18695 at 4341.973 kb on + strand, within CA264_18695 at 4341.973 kb on + strand, within CA264_18695 at 4341.974 kb on - strand, within CA264_18695 at 4341.978 kb on + strand, within CA264_18695 at 4341.979 kb on - strand, within CA264_18695 at 4341.990 kb on + strand, within CA264_18695 at 4342.046 kb on + strand, within CA264_18695 at 4342.047 kb on - strand, within CA264_18695 at 4342.055 kb on + strand, within CA264_18695 at 4342.085 kb on + strand, within CA264_18695 at 4342.085 kb on + strand, within CA264_18695 at 4342.114 kb on + strand, within CA264_18695
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.0025 mg/ml remove 4,339,481 + CA264_18675 0.87 +5.7 4,339,569 + +7.8 4,339,574 + +8.0 4,339,575 - +0.7 4,339,634 - -0.3 4,339,908 + +9.1 4,339,930 - -0.4 4,339,943 + +9.4 4,339,981 - +0.6 4,340,334 - -0.1 4,340,334 - +0.3 4,340,347 - +1.0 4,340,443 - +0.3 4,341,189 + +0.5 4,341,209 - +0.1 4,341,209 - +0.3 4,341,270 + -1.8 4,341,310 - +0.1 4,341,327 + CA264_18695 0.11 -2.1 4,341,377 + CA264_18695 0.15 -1.0 4,341,378 - CA264_18695 0.15 -0.1 4,341,423 + CA264_18695 0.19 +0.8 4,341,423 + CA264_18695 0.19 -1.6 4,341,566 + CA264_18695 0.30 -2.0 4,341,567 - CA264_18695 0.30 -1.0 4,341,693 + CA264_18695 0.41 +0.5 4,341,698 + CA264_18695 0.41 -1.9 4,341,698 + CA264_18695 0.41 -1.1 4,341,699 - CA264_18695 0.41 -0.5 4,341,810 + CA264_18695 0.50 -1.7 4,341,810 + CA264_18695 0.50 -0.8 4,341,810 + CA264_18695 0.50 -2.7 4,341,811 - CA264_18695 0.50 -1.3 4,341,914 + CA264_18695 0.59 +0.4 4,341,915 - CA264_18695 0.59 +0.1 4,341,915 - CA264_18695 0.59 -1.0 4,341,915 - CA264_18695 0.59 -0.3 4,341,929 + CA264_18695 0.60 -0.4 4,341,973 + CA264_18695 0.64 -0.9 4,341,973 + CA264_18695 0.64 -2.6 4,341,974 - CA264_18695 0.64 -0.5 4,341,978 + CA264_18695 0.64 -0.4 4,341,979 - CA264_18695 0.64 -0.5 4,341,990 + CA264_18695 0.65 +0.2 4,342,046 + CA264_18695 0.70 -1.1 4,342,047 - CA264_18695 0.70 -0.9 4,342,055 + CA264_18695 0.70 +0.1 4,342,085 + CA264_18695 0.73 -2.4 4,342,085 + CA264_18695 0.73 -1.3 4,342,114 + CA264_18695 0.75 -1.6
Or see this region's nucleotide sequence