Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_18240

Experiment: m.b. Thallium(I) acetate 0.0025 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_18230 and CA264_18235 are separated by 236 nucleotidesCA264_18235 and CA264_18240 are separated by 168 nucleotidesCA264_18240 and CA264_18245 are separated by 530 nucleotides CA264_18230: CA264_18230 - hypothetical protein, at 4,239,407 to 4,240,099 _18230 CA264_18235: CA264_18235 - hypothetical protein, at 4,240,336 to 4,240,890 _18235 CA264_18240: CA264_18240 - hypothetical protein, at 4,241,059 to 4,242,474 _18240 CA264_18245: CA264_18245 - NADH-quinone oxidoreductase subunit A, at 4,243,005 to 4,243,514 _18245 Position (kb) 4241 4242 4243Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 4240.102 kb on - strandat 4240.242 kb on - strandat 4240.256 kb on - strandat 4240.288 kb on + strandat 4240.288 kb on + strandat 4240.288 kb on + strandat 4240.289 kb on - strandat 4240.289 kb on - strandat 4240.300 kb on + strandat 4240.313 kb on + strandat 4240.318 kb on + strandat 4240.431 kb on + strand, within CA264_18235at 4240.457 kb on + strand, within CA264_18235at 4240.457 kb on + strand, within CA264_18235at 4240.457 kb on + strand, within CA264_18235at 4240.486 kb on + strand, within CA264_18235at 4240.498 kb on + strand, within CA264_18235at 4240.498 kb on + strand, within CA264_18235at 4240.557 kb on + strand, within CA264_18235at 4240.559 kb on + strand, within CA264_18235at 4240.559 kb on + strand, within CA264_18235at 4240.560 kb on - strand, within CA264_18235at 4240.560 kb on - strand, within CA264_18235at 4240.565 kb on - strand, within CA264_18235at 4240.565 kb on - strand, within CA264_18235at 4240.612 kb on - strand, within CA264_18235at 4240.621 kb on + strand, within CA264_18235at 4240.966 kb on + strandat 4240.966 kb on + strandat 4241.048 kb on - strandat 4241.053 kb on + strandat 4241.061 kb on - strandat 4241.246 kb on + strand, within CA264_18240at 4241.246 kb on + strand, within CA264_18240at 4241.246 kb on + strand, within CA264_18240at 4241.246 kb on + strand, within CA264_18240at 4241.246 kb on + strand, within CA264_18240at 4241.246 kb on + strand, within CA264_18240at 4241.246 kb on + strand, within CA264_18240at 4241.247 kb on - strand, within CA264_18240at 4241.247 kb on - strand, within CA264_18240at 4241.247 kb on - strand, within CA264_18240at 4241.247 kb on - strand, within CA264_18240at 4241.257 kb on + strand, within CA264_18240at 4241.258 kb on - strand, within CA264_18240at 4241.258 kb on - strand, within CA264_18240at 4241.259 kb on + strand, within CA264_18240at 4241.259 kb on + strand, within CA264_18240at 4241.329 kb on + strand, within CA264_18240at 4241.367 kb on + strand, within CA264_18240at 4241.368 kb on - strand, within CA264_18240at 4241.392 kb on + strand, within CA264_18240at 4241.426 kb on - strand, within CA264_18240at 4241.429 kb on + strand, within CA264_18240at 4241.429 kb on + strand, within CA264_18240at 4241.429 kb on + strand, within CA264_18240at 4241.430 kb on - strand, within CA264_18240at 4241.669 kb on + strand, within CA264_18240at 4241.670 kb on - strand, within CA264_18240at 4241.670 kb on - strand, within CA264_18240at 4241.670 kb on - strand, within CA264_18240at 4241.670 kb on - strand, within CA264_18240at 4241.670 kb on - strand, within CA264_18240at 4241.713 kb on - strand, within CA264_18240at 4241.762 kb on + strand, within CA264_18240at 4241.762 kb on + strand, within CA264_18240at 4241.762 kb on + strand, within CA264_18240at 4241.762 kb on + strand, within CA264_18240at 4241.762 kb on + strand, within CA264_18240at 4241.762 kb on + strand, within CA264_18240at 4241.762 kb on + strand, within CA264_18240at 4241.764 kb on + strand, within CA264_18240at 4241.764 kb on + strand, within CA264_18240at 4241.765 kb on - strand, within CA264_18240at 4241.765 kb on - strand, within CA264_18240at 4241.765 kb on - strand, within CA264_18240at 4241.765 kb on - strand, within CA264_18240at 4241.765 kb on - strand, within CA264_18240at 4241.768 kb on - strand, within CA264_18240at 4241.768 kb on - strand, within CA264_18240at 4241.768 kb on - strand, within CA264_18240at 4241.770 kb on - strand, within CA264_18240at 4241.770 kb on - strand, within CA264_18240at 4241.817 kb on + strand, within CA264_18240at 4241.819 kb on + strand, within CA264_18240at 4241.820 kb on - strand, within CA264_18240at 4241.884 kb on + strand, within CA264_18240at 4241.884 kb on + strand, within CA264_18240at 4241.922 kb on - strand, within CA264_18240at 4241.966 kb on - strand, within CA264_18240at 4242.041 kb on - strand, within CA264_18240at 4242.051 kb on + strand, within CA264_18240at 4242.052 kb on - strand, within CA264_18240at 4242.052 kb on - strand, within CA264_18240at 4242.053 kb on + strand, within CA264_18240at 4242.054 kb on - strand, within CA264_18240at 4242.071 kb on + strand, within CA264_18240at 4242.119 kb on - strand, within CA264_18240at 4242.125 kb on - strand, within CA264_18240at 4242.381 kb on + strandat 4242.382 kb on - strandat 4242.382 kb on - strandat 4242.431 kb on + strandat 4242.431 kb on + strandat 4242.431 kb on + strandat 4242.475 kb on - strandat 4242.511 kb on - strandat 4242.511 kb on - strandat 4242.511 kb on - strandat 4242.579 kb on + strandat 4242.598 kb on + strandat 4242.598 kb on + strandat 4242.599 kb on - strandat 4242.658 kb on - strandat 4242.658 kb on - strandat 4242.672 kb on + strandat 4242.695 kb on - strandat 4242.751 kb on + strandat 4242.752 kb on - strandat 4242.754 kb on - strandat 4242.754 kb on - strandat 4242.863 kb on - strandat 4242.865 kb on + strandat 4242.907 kb on + strandat 4242.928 kb on + strandat 4242.962 kb on - strandat 4243.002 kb on - strandat 4243.037 kb on + strandat 4243.334 kb on + strand, within CA264_18245at 4243.452 kb on + strand, within CA264_18245

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.0025 mg/ml
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4,240,102 - +0.4
4,240,242 - +0.2
4,240,256 - -0.8
4,240,288 + -2.1
4,240,288 + -0.6
4,240,288 + -2.0
4,240,289 - +0.6
4,240,289 - +1.5
4,240,300 + -0.3
4,240,313 + -1.3
4,240,318 + -0.0
4,240,431 + CA264_18235 0.17 -0.9
4,240,457 + CA264_18235 0.22 +0.6
4,240,457 + CA264_18235 0.22 -0.3
4,240,457 + CA264_18235 0.22 -0.3
4,240,486 + CA264_18235 0.27 -0.7
4,240,498 + CA264_18235 0.29 -0.9
4,240,498 + CA264_18235 0.29 -1.1
4,240,557 + CA264_18235 0.40 -1.8
4,240,559 + CA264_18235 0.40 -0.0
4,240,559 + CA264_18235 0.40 -1.4
4,240,560 - CA264_18235 0.40 +0.4
4,240,560 - CA264_18235 0.40 +1.2
4,240,565 - CA264_18235 0.41 +0.9
4,240,565 - CA264_18235 0.41 +1.4
4,240,612 - CA264_18235 0.50 +0.8
4,240,621 + CA264_18235 0.51 -1.4
4,240,966 + -1.2
4,240,966 + -1.7
4,241,048 - +0.8
4,241,053 + -0.2
4,241,061 - +0.7
4,241,246 + CA264_18240 0.13 -0.3
4,241,246 + CA264_18240 0.13 -0.4
4,241,246 + CA264_18240 0.13 -0.6
4,241,246 + CA264_18240 0.13 -3.1
4,241,246 + CA264_18240 0.13 +0.5
4,241,246 + CA264_18240 0.13 -0.5
4,241,246 + CA264_18240 0.13 +0.1
4,241,247 - CA264_18240 0.13 +2.5
4,241,247 - CA264_18240 0.13 +0.1
4,241,247 - CA264_18240 0.13 +1.0
4,241,247 - CA264_18240 0.13 +1.5
4,241,257 + CA264_18240 0.14 -0.4
4,241,258 - CA264_18240 0.14 -0.6
4,241,258 - CA264_18240 0.14 -0.2
4,241,259 + CA264_18240 0.14 -0.9
4,241,259 + CA264_18240 0.14 -1.4
4,241,329 + CA264_18240 0.19 -1.6
4,241,367 + CA264_18240 0.22 +0.2
4,241,368 - CA264_18240 0.22 +0.6
4,241,392 + CA264_18240 0.24 -0.4
4,241,426 - CA264_18240 0.26 -0.7
4,241,429 + CA264_18240 0.26 -0.6
4,241,429 + CA264_18240 0.26 -0.4
4,241,429 + CA264_18240 0.26 +0.1
4,241,430 - CA264_18240 0.26 +1.3
4,241,669 + CA264_18240 0.43 +0.0
4,241,670 - CA264_18240 0.43 +1.6
4,241,670 - CA264_18240 0.43 -0.2
4,241,670 - CA264_18240 0.43 +0.7
4,241,670 - CA264_18240 0.43 +0.6
4,241,670 - CA264_18240 0.43 -0.4
4,241,713 - CA264_18240 0.46 -0.1
4,241,762 + CA264_18240 0.50 -0.3
4,241,762 + CA264_18240 0.50 +1.5
4,241,762 + CA264_18240 0.50 +1.1
4,241,762 + CA264_18240 0.50 +0.1
4,241,762 + CA264_18240 0.50 -1.4
4,241,762 + CA264_18240 0.50 -0.0
4,241,762 + CA264_18240 0.50 +0.2
4,241,764 + CA264_18240 0.50 -0.6
4,241,764 + CA264_18240 0.50 -1.3
4,241,765 - CA264_18240 0.50 +2.6
4,241,765 - CA264_18240 0.50 +0.8
4,241,765 - CA264_18240 0.50 -0.2
4,241,765 - CA264_18240 0.50 +2.2
4,241,765 - CA264_18240 0.50 +0.5
4,241,768 - CA264_18240 0.50 +1.1
4,241,768 - CA264_18240 0.50 +0.1
4,241,768 - CA264_18240 0.50 +0.3
4,241,770 - CA264_18240 0.50 +1.0
4,241,770 - CA264_18240 0.50 -0.0
4,241,817 + CA264_18240 0.54 -0.3
4,241,819 + CA264_18240 0.54 -1.5
4,241,820 - CA264_18240 0.54 +1.7
4,241,884 + CA264_18240 0.58 -1.3
4,241,884 + CA264_18240 0.58 -0.9
4,241,922 - CA264_18240 0.61 +0.5
4,241,966 - CA264_18240 0.64 +2.1
4,242,041 - CA264_18240 0.69 +0.8
4,242,051 + CA264_18240 0.70 +1.2
4,242,052 - CA264_18240 0.70 +0.7
4,242,052 - CA264_18240 0.70 +0.6
4,242,053 + CA264_18240 0.70 +0.0
4,242,054 - CA264_18240 0.70 +0.7
4,242,071 + CA264_18240 0.71 +1.0
4,242,119 - CA264_18240 0.75 +0.6
4,242,125 - CA264_18240 0.75 +0.4
4,242,381 + +0.5
4,242,382 - +0.8
4,242,382 - -0.9
4,242,431 + -1.3
4,242,431 + -0.2
4,242,431 + -2.2
4,242,475 - +0.0
4,242,511 - +0.5
4,242,511 - -0.1
4,242,511 - +1.1
4,242,579 + -1.0
4,242,598 + -2.6
4,242,598 + -2.4
4,242,599 - +0.0
4,242,658 - +0.4
4,242,658 - -0.3
4,242,672 + -0.0
4,242,695 - +1.7
4,242,751 + -1.3
4,242,752 - +0.1
4,242,754 - -0.1
4,242,754 - +0.2
4,242,863 - +2.7
4,242,865 + +0.3
4,242,907 + +0.7
4,242,928 + -0.2
4,242,962 - +0.6
4,243,002 - +0.2
4,243,037 + -0.2
4,243,334 + CA264_18245 0.65 -1.3
4,243,452 + CA264_18245 0.88 -0.4

Or see this region's nucleotide sequence