Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_15910

Experiment: m.b. Thallium(I) acetate 0.0025 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_15900 and CA264_15905 are separated by 118 nucleotidesCA264_15905 and CA264_15910 are separated by 21 nucleotidesCA264_15910 and CA264_15915 are separated by 187 nucleotides CA264_15900: CA264_15900 - SAM-dependent methyltransferase, at 3,710,647 to 3,711,330 _15900 CA264_15905: CA264_15905 - esterase, at 3,711,449 to 3,711,877 _15905 CA264_15910: CA264_15910 - 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN, at 3,711,899 to 3,712,972 _15910 CA264_15915: CA264_15915 - ribonuclease BN, at 3,713,160 to 3,714,122 _15915 Position (kb) 3711 3712 3713Strain fitness (log2 ratio) -2 -1 0 1at 3710.923 kb on + strand, within CA264_15900at 3710.923 kb on + strand, within CA264_15900at 3710.924 kb on - strand, within CA264_15900at 3710.924 kb on - strand, within CA264_15900at 3710.949 kb on + strand, within CA264_15900at 3710.990 kb on + strand, within CA264_15900at 3710.991 kb on - strand, within CA264_15900at 3711.033 kb on - strand, within CA264_15900at 3711.082 kb on - strand, within CA264_15900at 3711.086 kb on + strand, within CA264_15900at 3711.086 kb on + strand, within CA264_15900at 3711.087 kb on - strand, within CA264_15900at 3711.127 kb on - strand, within CA264_15900at 3711.130 kb on + strand, within CA264_15900at 3711.285 kb on - strandat 3711.285 kb on - strandat 3711.285 kb on - strandat 3711.317 kb on - strandat 3711.382 kb on + strandat 3711.382 kb on + strandat 3711.384 kb on + strandat 3711.384 kb on + strandat 3711.384 kb on + strandat 3711.386 kb on + strandat 3711.387 kb on - strandat 3711.387 kb on - strandat 3711.393 kb on + strandat 3711.393 kb on + strandat 3711.409 kb on - strandat 3711.460 kb on - strandat 3711.460 kb on - strandat 3711.460 kb on - strandat 3711.465 kb on + strandat 3711.662 kb on + strand, within CA264_15905at 3711.680 kb on + strand, within CA264_15905at 3711.681 kb on - strand, within CA264_15905at 3711.721 kb on + strand, within CA264_15905at 3711.721 kb on + strand, within CA264_15905at 3711.728 kb on + strand, within CA264_15905at 3711.746 kb on + strand, within CA264_15905at 3711.808 kb on + strand, within CA264_15905at 3711.829 kb on - strand, within CA264_15905at 3711.918 kb on + strandat 3711.918 kb on + strandat 3711.923 kb on - strandat 3711.931 kb on + strandat 3712.054 kb on + strand, within CA264_15910at 3712.112 kb on - strand, within CA264_15910at 3712.274 kb on - strand, within CA264_15910at 3712.293 kb on - strand, within CA264_15910at 3712.329 kb on + strand, within CA264_15910at 3712.332 kb on - strand, within CA264_15910at 3712.400 kb on + strand, within CA264_15910at 3712.401 kb on - strand, within CA264_15910at 3712.534 kb on + strand, within CA264_15910at 3712.534 kb on + strand, within CA264_15910at 3712.671 kb on - strand, within CA264_15910at 3712.696 kb on + strand, within CA264_15910at 3712.701 kb on - strand, within CA264_15910at 3712.701 kb on - strand, within CA264_15910at 3712.706 kb on + strand, within CA264_15910at 3712.706 kb on + strand, within CA264_15910at 3712.706 kb on + strand, within CA264_15910at 3712.707 kb on - strand, within CA264_15910at 3712.720 kb on + strand, within CA264_15910at 3712.804 kb on + strand, within CA264_15910at 3712.804 kb on + strand, within CA264_15910at 3712.861 kb on + strand, within CA264_15910at 3712.865 kb on + strandat 3712.971 kb on - strandat 3712.975 kb on - strandat 3713.014 kb on + strandat 3713.015 kb on - strandat 3713.022 kb on + strandat 3713.023 kb on - strandat 3713.066 kb on + strandat 3713.096 kb on - strandat 3713.132 kb on - strandat 3713.162 kb on - strandat 3713.281 kb on + strand, within CA264_15915at 3713.282 kb on - strand, within CA264_15915at 3713.285 kb on + strand, within CA264_15915at 3713.293 kb on + strand, within CA264_15915at 3713.330 kb on + strand, within CA264_15915at 3713.338 kb on + strand, within CA264_15915at 3713.341 kb on + strand, within CA264_15915at 3713.342 kb on - strand, within CA264_15915at 3713.355 kb on + strand, within CA264_15915at 3713.355 kb on + strand, within CA264_15915at 3713.356 kb on - strand, within CA264_15915at 3713.358 kb on - strand, within CA264_15915at 3713.384 kb on - strand, within CA264_15915at 3713.413 kb on + strand, within CA264_15915at 3713.495 kb on - strand, within CA264_15915at 3713.614 kb on + strand, within CA264_15915at 3713.795 kb on + strand, within CA264_15915at 3713.795 kb on + strand, within CA264_15915at 3713.816 kb on + strand, within CA264_15915at 3713.826 kb on + strand, within CA264_15915

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.0025 mg/ml
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3,710,923 + CA264_15900 0.40 -1.0
3,710,923 + CA264_15900 0.40 +1.4
3,710,924 - CA264_15900 0.40 -0.4
3,710,924 - CA264_15900 0.40 -0.2
3,710,949 + CA264_15900 0.44 -0.6
3,710,990 + CA264_15900 0.50 -1.6
3,710,991 - CA264_15900 0.50 -0.9
3,711,033 - CA264_15900 0.56 -1.1
3,711,082 - CA264_15900 0.64 +0.8
3,711,086 + CA264_15900 0.64 -1.9
3,711,086 + CA264_15900 0.64 -0.5
3,711,087 - CA264_15900 0.64 -1.6
3,711,127 - CA264_15900 0.70 -1.8
3,711,130 + CA264_15900 0.71 +1.5
3,711,285 - -0.1
3,711,285 - -0.8
3,711,285 - -1.2
3,711,317 - -0.4
3,711,382 + -1.0
3,711,382 + +0.1
3,711,384 + -0.9
3,711,384 + -1.0
3,711,384 + -0.7
3,711,386 + -2.0
3,711,387 - +0.2
3,711,387 - -1.0
3,711,393 + -0.9
3,711,393 + -0.7
3,711,409 - -0.7
3,711,460 - +0.1
3,711,460 - -2.4
3,711,460 - -0.1
3,711,465 + -1.2
3,711,662 + CA264_15905 0.50 -1.0
3,711,680 + CA264_15905 0.54 -2.0
3,711,681 - CA264_15905 0.54 -0.1
3,711,721 + CA264_15905 0.63 +0.0
3,711,721 + CA264_15905 0.63 -1.9
3,711,728 + CA264_15905 0.65 +0.6
3,711,746 + CA264_15905 0.69 -0.4
3,711,808 + CA264_15905 0.84 -1.3
3,711,829 - CA264_15905 0.89 -1.3
3,711,918 + -1.1
3,711,918 + +1.2
3,711,923 - -1.7
3,711,931 + -1.0
3,712,054 + CA264_15910 0.14 -0.6
3,712,112 - CA264_15910 0.20 -0.2
3,712,274 - CA264_15910 0.35 +0.6
3,712,293 - CA264_15910 0.37 -1.7
3,712,329 + CA264_15910 0.40 -2.7
3,712,332 - CA264_15910 0.40 -0.9
3,712,400 + CA264_15910 0.47 -1.4
3,712,401 - CA264_15910 0.47 +0.1
3,712,534 + CA264_15910 0.59 -2.2
3,712,534 + CA264_15910 0.59 -1.7
3,712,671 - CA264_15910 0.72 -0.8
3,712,696 + CA264_15910 0.74 -2.6
3,712,701 - CA264_15910 0.75 -0.2
3,712,701 - CA264_15910 0.75 -0.2
3,712,706 + CA264_15910 0.75 -0.4
3,712,706 + CA264_15910 0.75 -0.3
3,712,706 + CA264_15910 0.75 -1.0
3,712,707 - CA264_15910 0.75 -0.8
3,712,720 + CA264_15910 0.76 -1.8
3,712,804 + CA264_15910 0.84 -2.5
3,712,804 + CA264_15910 0.84 -0.7
3,712,861 + CA264_15910 0.90 -0.7
3,712,865 + -1.3
3,712,971 - -0.1
3,712,975 - -1.5
3,713,014 + -0.3
3,713,015 - -0.7
3,713,022 + +0.1
3,713,023 - +1.5
3,713,066 + -0.6
3,713,096 - -1.4
3,713,132 - -1.3
3,713,162 - -1.5
3,713,281 + CA264_15915 0.13 -0.5
3,713,282 - CA264_15915 0.13 -1.9
3,713,285 + CA264_15915 0.13 -0.7
3,713,293 + CA264_15915 0.14 -0.6
3,713,330 + CA264_15915 0.18 -0.1
3,713,338 + CA264_15915 0.18 -0.1
3,713,341 + CA264_15915 0.19 -0.3
3,713,342 - CA264_15915 0.19 -1.0
3,713,355 + CA264_15915 0.20 -2.0
3,713,355 + CA264_15915 0.20 -1.1
3,713,356 - CA264_15915 0.20 -0.4
3,713,358 - CA264_15915 0.21 -2.4
3,713,384 - CA264_15915 0.23 -0.5
3,713,413 + CA264_15915 0.26 -1.6
3,713,495 - CA264_15915 0.35 -1.3
3,713,614 + CA264_15915 0.47 -0.8
3,713,795 + CA264_15915 0.66 -1.7
3,713,795 + CA264_15915 0.66 -2.2
3,713,816 + CA264_15915 0.68 -2.1
3,713,826 + CA264_15915 0.69 -2.6

Or see this region's nucleotide sequence