Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_15375

Experiment: m.b. Thallium(I) acetate 0.0025 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_15370 and CA264_15375 are separated by 96 nucleotidesCA264_15375 and CA264_15380 are separated by 242 nucleotidesCA264_15380 and CA264_15385 are separated by 119 nucleotides CA264_15370: CA264_15370 - hypothetical protein, at 3,600,986 to 3,603,574 _15370 CA264_15375: CA264_15375 - EamA family transporter, at 3,603,671 to 3,604,540 _15375 CA264_15380: CA264_15380 - RecX family transcriptional regulator, at 3,604,783 to 3,605,268 _15380 CA264_15385: CA264_15385 - TIGR02391 family protein, at 3,605,388 to 3,606,188 _15385 Position (kb) 3603 3604 3605Strain fitness (log2 ratio) -2 -1 0 1 2 3 4at 3602.747 kb on + strand, within CA264_15370at 3602.754 kb on + strand, within CA264_15370at 3602.754 kb on + strand, within CA264_15370at 3602.754 kb on + strand, within CA264_15370at 3602.755 kb on - strand, within CA264_15370at 3603.072 kb on + strand, within CA264_15370at 3603.073 kb on - strand, within CA264_15370at 3603.156 kb on + strand, within CA264_15370at 3603.157 kb on - strand, within CA264_15370at 3603.157 kb on - strand, within CA264_15370at 3603.223 kb on + strand, within CA264_15370at 3603.231 kb on + strand, within CA264_15370at 3603.232 kb on - strand, within CA264_15370at 3603.294 kb on - strand, within CA264_15370at 3603.294 kb on - strand, within CA264_15370at 3603.363 kb on + strandat 3603.364 kb on - strandat 3603.364 kb on - strandat 3603.364 kb on - strandat 3603.364 kb on - strandat 3603.367 kb on + strandat 3603.381 kb on + strandat 3603.381 kb on + strandat 3603.382 kb on - strandat 3603.408 kb on + strandat 3603.456 kb on + strandat 3603.456 kb on + strandat 3603.456 kb on + strandat 3603.457 kb on - strandat 3603.564 kb on + strandat 3603.564 kb on + strandat 3603.580 kb on - strandat 3603.663 kb on - strandat 3603.674 kb on + strandat 3603.694 kb on + strandat 3603.695 kb on - strandat 3603.792 kb on + strand, within CA264_15375at 3603.859 kb on + strand, within CA264_15375at 3603.860 kb on - strand, within CA264_15375at 3603.860 kb on - strand, within CA264_15375at 3603.915 kb on + strand, within CA264_15375at 3603.915 kb on + strand, within CA264_15375at 3603.915 kb on + strand, within CA264_15375at 3603.915 kb on + strand, within CA264_15375at 3603.915 kb on + strand, within CA264_15375at 3603.916 kb on - strand, within CA264_15375at 3603.935 kb on - strand, within CA264_15375at 3604.001 kb on - strand, within CA264_15375at 3604.001 kb on - strand, within CA264_15375at 3604.026 kb on - strand, within CA264_15375at 3604.038 kb on + strand, within CA264_15375at 3604.087 kb on + strand, within CA264_15375at 3604.092 kb on + strand, within CA264_15375at 3604.092 kb on + strand, within CA264_15375at 3604.093 kb on - strand, within CA264_15375at 3604.239 kb on - strand, within CA264_15375at 3604.278 kb on + strand, within CA264_15375at 3604.278 kb on + strand, within CA264_15375at 3604.324 kb on + strand, within CA264_15375at 3604.463 kb on + strandat 3604.542 kb on + strandat 3604.542 kb on + strandat 3604.543 kb on - strandat 3604.543 kb on - strandat 3604.543 kb on - strandat 3604.543 kb on - strandat 3604.543 kb on - strandat 3604.543 kb on - strandat 3604.543 kb on - strandat 3604.543 kb on - strandat 3604.544 kb on + strandat 3604.544 kb on + strandat 3604.544 kb on + strandat 3604.545 kb on - strandat 3604.545 kb on - strandat 3604.547 kb on - strandat 3604.559 kb on + strandat 3604.559 kb on + strandat 3604.572 kb on - strandat 3604.668 kb on - strandat 3604.711 kb on + strandat 3604.711 kb on + strandat 3604.714 kb on - strandat 3604.736 kb on + strandat 3604.770 kb on + strandat 3604.777 kb on - strandat 3604.777 kb on - strandat 3604.777 kb on - strandat 3604.811 kb on - strandat 3604.894 kb on + strand, within CA264_15380at 3604.894 kb on + strand, within CA264_15380at 3604.987 kb on + strand, within CA264_15380at 3604.987 kb on + strand, within CA264_15380at 3604.988 kb on - strand, within CA264_15380at 3605.002 kb on + strand, within CA264_15380at 3605.003 kb on - strand, within CA264_15380at 3605.035 kb on - strand, within CA264_15380at 3605.047 kb on - strand, within CA264_15380at 3605.110 kb on + strand, within CA264_15380at 3605.127 kb on - strand, within CA264_15380at 3605.127 kb on - strand, within CA264_15380at 3605.197 kb on + strand, within CA264_15380at 3605.198 kb on - strand, within CA264_15380at 3605.280 kb on - strandat 3605.287 kb on - strandat 3605.325 kb on + strandat 3605.325 kb on + strandat 3605.356 kb on + strandat 3605.363 kb on + strandat 3605.367 kb on + strandat 3605.368 kb on - strandat 3605.368 kb on - strandat 3605.377 kb on + strandat 3605.378 kb on - strandat 3605.378 kb on - strandat 3605.378 kb on - strandat 3605.378 kb on - strandat 3605.378 kb on - strandat 3605.378 kb on - strandat 3605.384 kb on + strandat 3605.385 kb on - strandat 3605.401 kb on + strandat 3605.424 kb on - strandat 3605.430 kb on - strandat 3605.430 kb on - strandat 3605.450 kb on - strandat 3605.456 kb on + strandat 3605.503 kb on + strand, within CA264_15385at 3605.504 kb on - strand, within CA264_15385at 3605.509 kb on + strand, within CA264_15385at 3605.510 kb on - strand, within CA264_15385

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.0025 mg/ml
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3,602,747 + CA264_15370 0.68 +0.3
3,602,754 + CA264_15370 0.68 +1.2
3,602,754 + CA264_15370 0.68 +1.5
3,602,754 + CA264_15370 0.68 -2.1
3,602,755 - CA264_15370 0.68 -1.3
3,603,072 + CA264_15370 0.81 +0.4
3,603,073 - CA264_15370 0.81 -2.4
3,603,156 + CA264_15370 0.84 +0.3
3,603,157 - CA264_15370 0.84 -0.5
3,603,157 - CA264_15370 0.84 -1.2
3,603,223 + CA264_15370 0.86 -0.8
3,603,231 + CA264_15370 0.87 -2.1
3,603,232 - CA264_15370 0.87 -0.7
3,603,294 - CA264_15370 0.89 +0.5
3,603,294 - CA264_15370 0.89 -0.3
3,603,363 + -0.9
3,603,364 - -0.5
3,603,364 - -0.7
3,603,364 - +0.5
3,603,364 - -2.0
3,603,367 + -1.3
3,603,381 + -0.1
3,603,381 + -0.3
3,603,382 - -0.1
3,603,408 + -0.3
3,603,456 + +0.3
3,603,456 + +0.0
3,603,456 + -1.3
3,603,457 - -0.0
3,603,564 + +1.1
3,603,564 + +0.2
3,603,580 - -0.5
3,603,663 - +0.6
3,603,674 + +0.6
3,603,694 + -0.5
3,603,695 - -0.1
3,603,792 + CA264_15375 0.14 -0.7
3,603,859 + CA264_15375 0.22 +0.5
3,603,860 - CA264_15375 0.22 -0.4
3,603,860 - CA264_15375 0.22 -0.3
3,603,915 + CA264_15375 0.28 +0.5
3,603,915 + CA264_15375 0.28 +0.2
3,603,915 + CA264_15375 0.28 +1.2
3,603,915 + CA264_15375 0.28 +1.0
3,603,915 + CA264_15375 0.28 +0.5
3,603,916 - CA264_15375 0.28 +0.2
3,603,935 - CA264_15375 0.30 -1.5
3,604,001 - CA264_15375 0.38 +0.8
3,604,001 - CA264_15375 0.38 -0.3
3,604,026 - CA264_15375 0.41 -1.0
3,604,038 + CA264_15375 0.42 +0.5
3,604,087 + CA264_15375 0.48 +1.1
3,604,092 + CA264_15375 0.48 +0.3
3,604,092 + CA264_15375 0.48 +0.5
3,604,093 - CA264_15375 0.49 +0.1
3,604,239 - CA264_15375 0.65 +0.4
3,604,278 + CA264_15375 0.70 +4.1
3,604,278 + CA264_15375 0.70 -0.8
3,604,324 + CA264_15375 0.75 +0.4
3,604,463 + +0.2
3,604,542 + +0.8
3,604,542 + -0.3
3,604,543 - -1.5
3,604,543 - -0.7
3,604,543 - -2.1
3,604,543 - -2.7
3,604,543 - +0.5
3,604,543 - -0.5
3,604,543 - +0.0
3,604,543 - -0.5
3,604,544 + -0.4
3,604,544 + -0.4
3,604,544 + +0.1
3,604,545 - +0.5
3,604,545 - -0.3
3,604,547 - -1.0
3,604,559 + -0.1
3,604,559 + +0.4
3,604,572 - -1.4
3,604,668 - -0.1
3,604,711 + +0.3
3,604,711 + -0.1
3,604,714 - -1.8
3,604,736 + +1.4
3,604,770 + -0.0
3,604,777 - +0.6
3,604,777 - -1.5
3,604,777 - +1.0
3,604,811 - -1.0
3,604,894 + CA264_15380 0.23 +0.9
3,604,894 + CA264_15380 0.23 +0.1
3,604,987 + CA264_15380 0.42 +0.2
3,604,987 + CA264_15380 0.42 -0.6
3,604,988 - CA264_15380 0.42 +0.2
3,605,002 + CA264_15380 0.45 +0.1
3,605,003 - CA264_15380 0.45 +0.8
3,605,035 - CA264_15380 0.52 -0.2
3,605,047 - CA264_15380 0.54 +1.5
3,605,110 + CA264_15380 0.67 +0.9
3,605,127 - CA264_15380 0.71 -0.8
3,605,127 - CA264_15380 0.71 -0.0
3,605,197 + CA264_15380 0.85 +2.3
3,605,198 - CA264_15380 0.85 +0.9
3,605,280 - +2.1
3,605,287 - +0.2
3,605,325 + +0.9
3,605,325 + -1.1
3,605,356 + +1.1
3,605,363 + -1.1
3,605,367 + +0.5
3,605,368 - +0.8
3,605,368 - +0.9
3,605,377 + +0.2
3,605,378 - -0.0
3,605,378 - +0.6
3,605,378 - +0.8
3,605,378 - +0.7
3,605,378 - +0.2
3,605,378 - +1.8
3,605,384 + +0.7
3,605,385 - +1.8
3,605,401 + +0.2
3,605,424 - -0.5
3,605,430 - +1.6
3,605,430 - -0.4
3,605,450 - -0.4
3,605,456 + -0.0
3,605,503 + CA264_15385 0.14 +0.8
3,605,504 - CA264_15385 0.14 -1.2
3,605,509 + CA264_15385 0.15 -0.0
3,605,510 - CA264_15385 0.15 +1.8

Or see this region's nucleotide sequence