Experiment: m.b. Thallium(I) acetate 0.0025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_14100 and CA264_14105 are separated by 263 nucleotides CA264_14105 and CA264_14110 are separated by 1 nucleotides CA264_14110 and CA264_14115 are separated by 161 nucleotides
CA264_14100: CA264_14100 - isocitrate dehydrogenase (NADP(+)), at 3,310,636 to 3,312,864
_14100
CA264_14105: CA264_14105 - T9SS C-terminal target domain-containing protein, at 3,313,128 to 3,314,486
_14105
CA264_14110: CA264_14110 - phosphoribosyltransferase, at 3,314,488 to 3,315,114
_14110
CA264_14115: CA264_14115 - hydrolase, at 3,315,276 to 3,315,962
_14115
Position (kb)
3313
3314
3315 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3312.886 kb on + strand at 3312.887 kb on - strand at 3312.887 kb on - strand at 3312.887 kb on - strand at 3312.888 kb on + strand at 3312.888 kb on + strand at 3312.889 kb on - strand at 3312.889 kb on - strand at 3312.889 kb on - strand at 3312.890 kb on - strand at 3312.931 kb on - strand at 3312.931 kb on - strand at 3312.932 kb on + strand at 3313.028 kb on + strand at 3313.054 kb on - strand at 3313.074 kb on - strand at 3313.078 kb on + strand at 3313.078 kb on + strand at 3313.079 kb on - strand at 3313.079 kb on - strand at 3313.079 kb on - strand at 3313.082 kb on - strand at 3313.105 kb on + strand at 3313.105 kb on + strand at 3313.113 kb on - strand at 3313.113 kb on - strand at 3313.115 kb on + strand at 3313.115 kb on + strand at 3313.125 kb on + strand at 3313.126 kb on - strand at 3313.126 kb on - strand at 3313.158 kb on + strand at 3313.158 kb on + strand at 3313.159 kb on - strand at 3313.196 kb on + strand at 3313.221 kb on + strand at 3313.222 kb on - strand at 3313.223 kb on + strand at 3313.223 kb on + strand at 3313.223 kb on + strand at 3313.223 kb on + strand at 3313.224 kb on - strand at 3313.225 kb on - strand at 3313.386 kb on + strand, within CA264_14105 at 3313.403 kb on + strand, within CA264_14105 at 3313.538 kb on + strand, within CA264_14105 at 3313.545 kb on - strand, within CA264_14105 at 3313.553 kb on + strand, within CA264_14105 at 3313.554 kb on - strand, within CA264_14105 at 3313.585 kb on - strand, within CA264_14105 at 3313.597 kb on + strand, within CA264_14105 at 3313.598 kb on - strand, within CA264_14105 at 3313.618 kb on + strand, within CA264_14105 at 3313.618 kb on + strand, within CA264_14105 at 3313.628 kb on - strand, within CA264_14105 at 3313.670 kb on - strand, within CA264_14105 at 3313.680 kb on + strand, within CA264_14105 at 3313.693 kb on + strand, within CA264_14105 at 3313.694 kb on - strand, within CA264_14105 at 3313.759 kb on + strand, within CA264_14105 at 3313.759 kb on + strand, within CA264_14105 at 3313.759 kb on + strand, within CA264_14105 at 3313.759 kb on + strand, within CA264_14105 at 3313.759 kb on + strand, within CA264_14105 at 3313.759 kb on + strand, within CA264_14105 at 3313.760 kb on - strand, within CA264_14105 at 3313.783 kb on + strand, within CA264_14105 at 3313.784 kb on - strand, within CA264_14105 at 3313.789 kb on + strand, within CA264_14105 at 3313.851 kb on - strand, within CA264_14105 at 3313.898 kb on - strand, within CA264_14105 at 3313.898 kb on - strand, within CA264_14105 at 3313.910 kb on + strand, within CA264_14105 at 3313.910 kb on + strand, within CA264_14105 at 3313.910 kb on + strand, within CA264_14105 at 3314.010 kb on + strand, within CA264_14105 at 3314.065 kb on + strand, within CA264_14105 at 3314.101 kb on - strand, within CA264_14105 at 3314.142 kb on + strand, within CA264_14105 at 3314.143 kb on - strand, within CA264_14105 at 3314.149 kb on + strand, within CA264_14105 at 3314.201 kb on - strand, within CA264_14105 at 3314.201 kb on - strand, within CA264_14105 at 3314.471 kb on + strand at 3314.512 kb on + strand at 3314.529 kb on - strand at 3314.701 kb on + strand, within CA264_14110 at 3314.829 kb on + strand, within CA264_14110 at 3314.853 kb on - strand, within CA264_14110 at 3314.958 kb on + strand, within CA264_14110 at 3314.959 kb on - strand, within CA264_14110 at 3315.133 kb on + strand at 3315.202 kb on - strand at 3315.419 kb on + strand, within CA264_14115 at 3315.420 kb on - strand, within CA264_14115
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.0025 mg/ml remove 3,312,886 + +1.2 3,312,887 - +1.3 3,312,887 - -1.6 3,312,887 - -1.2 3,312,888 + +0.1 3,312,888 + -0.4 3,312,889 - -1.9 3,312,889 - +2.2 3,312,889 - -1.3 3,312,890 - -0.7 3,312,931 - -0.2 3,312,931 - -1.5 3,312,932 + -0.2 3,313,028 + -0.9 3,313,054 - -0.7 3,313,074 - -1.5 3,313,078 + +1.4 3,313,078 + -1.5 3,313,079 - -1.0 3,313,079 - -0.1 3,313,079 - -1.4 3,313,082 - -1.9 3,313,105 + +0.2 3,313,105 + +1.1 3,313,113 - -0.6 3,313,113 - -0.3 3,313,115 + +0.6 3,313,115 + +1.2 3,313,125 + +1.7 3,313,126 - +0.3 3,313,126 - -0.1 3,313,158 + -0.1 3,313,158 + -2.5 3,313,159 - -0.4 3,313,196 + +0.4 3,313,221 + +2.1 3,313,222 - +0.3 3,313,223 + +1.1 3,313,223 + -0.5 3,313,223 + +0.2 3,313,223 + +0.2 3,313,224 - -1.5 3,313,225 - -0.3 3,313,386 + CA264_14105 0.19 +0.2 3,313,403 + CA264_14105 0.20 +0.7 3,313,538 + CA264_14105 0.30 +1.2 3,313,545 - CA264_14105 0.31 -2.0 3,313,553 + CA264_14105 0.31 +1.3 3,313,554 - CA264_14105 0.31 -1.3 3,313,585 - CA264_14105 0.34 -0.8 3,313,597 + CA264_14105 0.35 +0.2 3,313,598 - CA264_14105 0.35 +0.3 3,313,618 + CA264_14105 0.36 +0.6 3,313,618 + CA264_14105 0.36 -0.2 3,313,628 - CA264_14105 0.37 +0.6 3,313,670 - CA264_14105 0.40 -0.4 3,313,680 + CA264_14105 0.41 +0.4 3,313,693 + CA264_14105 0.42 +0.9 3,313,694 - CA264_14105 0.42 -2.2 3,313,759 + CA264_14105 0.46 +0.8 3,313,759 + CA264_14105 0.46 +0.4 3,313,759 + CA264_14105 0.46 +0.1 3,313,759 + CA264_14105 0.46 -0.5 3,313,759 + CA264_14105 0.46 -0.7 3,313,759 + CA264_14105 0.46 +0.9 3,313,760 - CA264_14105 0.47 -0.6 3,313,783 + CA264_14105 0.48 -0.5 3,313,784 - CA264_14105 0.48 -0.8 3,313,789 + CA264_14105 0.49 +1.4 3,313,851 - CA264_14105 0.53 -0.7 3,313,898 - CA264_14105 0.57 -0.3 3,313,898 - CA264_14105 0.57 +1.3 3,313,910 + CA264_14105 0.58 +0.7 3,313,910 + CA264_14105 0.58 +0.8 3,313,910 + CA264_14105 0.58 -0.1 3,314,010 + CA264_14105 0.65 +0.6 3,314,065 + CA264_14105 0.69 -0.9 3,314,101 - CA264_14105 0.72 -2.0 3,314,142 + CA264_14105 0.75 +0.0 3,314,143 - CA264_14105 0.75 -0.7 3,314,149 + CA264_14105 0.75 +0.1 3,314,201 - CA264_14105 0.79 +0.3 3,314,201 - CA264_14105 0.79 -1.4 3,314,471 + +0.8 3,314,512 + +1.9 3,314,529 - -1.6 3,314,701 + CA264_14110 0.34 +0.4 3,314,829 + CA264_14110 0.54 -1.5 3,314,853 - CA264_14110 0.58 +0.5 3,314,958 + CA264_14110 0.75 +1.3 3,314,959 - CA264_14110 0.75 +0.6 3,315,133 + -0.6 3,315,202 - +0.6 3,315,419 + CA264_14115 0.21 -1.4 3,315,420 - CA264_14115 0.21 -0.4
Or see this region's nucleotide sequence