Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_13740
Experiment: m.b. Thallium(I) acetate 0.0025 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Thallium(I) acetate 0.0025 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,209,217 | + | -1.0 | |||
3,209,217 | + | -0.8 | |||
3,209,261 | + | -0.2 | |||
3,209,262 | - | -1.7 | |||
3,209,275 | - | -0.0 | |||
3,209,321 | - | -1.6 | |||
3,209,322 | + | -2.3 | |||
3,209,323 | - | -2.5 | |||
3,209,323 | - | -2.1 | |||
3,209,323 | - | -2.6 | |||
3,210,178 | + | -1.4 | |||
3,210,925 | + | -0.4 | |||
3,210,925 | + | -0.6 | |||
3,210,982 | - | -2.9 | |||
3,211,074 | - | -1.1 | |||
3,211,106 | + | -1.7 | |||
3,211,114 | - | -0.9 | |||
3,211,150 | - | -0.4 | |||
3,211,169 | - | -1.6 | |||
3,211,169 | - | -2.4 | |||
3,211,209 | + | -3.1 | |||
3,211,209 | + | +0.3 | |||
3,211,213 | + | -5.1 | |||
3,211,213 | + | -3.0 | |||
3,211,213 | + | -1.5 | |||
3,211,214 | - | -1.6 | |||
3,211,214 | - | -2.5 | |||
3,211,298 | + | -2.1 | |||
3,211,329 | + | -0.3 | |||
3,211,329 | + | -2.1 | |||
3,211,329 | + | -0.9 | |||
3,211,440 | + | CA264_13745 | 0.17 | -4.9 | |
3,211,440 | + | CA264_13745 | 0.17 | -0.8 | |
3,211,441 | - | CA264_13745 | 0.17 | -3.2 | |
3,211,454 | + | CA264_13745 | 0.17 | -0.7 | |
3,211,454 | + | CA264_13745 | 0.17 | -1.7 | |
3,211,454 | + | CA264_13745 | 0.17 | -0.8 | |
3,211,455 | - | CA264_13745 | 0.17 | -0.6 | |
3,211,455 | - | CA264_13745 | 0.17 | -1.4 | |
3,211,598 | + | CA264_13745 | 0.26 | -1.9 | |
3,211,680 | - | CA264_13745 | 0.31 | -0.8 |
Or see this region's nucleotide sequence