Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_12955

Experiment: m.b. Thallium(I) acetate 0.0025 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_12950 and CA264_12955 are separated by 386 nucleotidesCA264_12955 and CA264_12960 are separated by 187 nucleotides CA264_12950: CA264_12950 - peptidase S8, at 3,018,259 to 3,019,482 _12950 CA264_12955: CA264_12955 - peptidyl-prolyl cis-trans isomerase, at 3,019,869 to 3,020,636 _12955 CA264_12960: CA264_12960 - peptidase M13, at 3,020,824 to 3,022,890 _12960 Position (kb) 3019 3020 3021Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 3018.885 kb on + strand, within CA264_12950at 3018.987 kb on + strand, within CA264_12950at 3018.987 kb on + strand, within CA264_12950at 3018.991 kb on + strand, within CA264_12950at 3018.991 kb on + strand, within CA264_12950at 3019.089 kb on - strand, within CA264_12950at 3019.134 kb on + strand, within CA264_12950at 3019.141 kb on + strand, within CA264_12950at 3019.186 kb on - strand, within CA264_12950at 3019.212 kb on + strand, within CA264_12950at 3019.212 kb on + strand, within CA264_12950at 3019.213 kb on - strand, within CA264_12950at 3019.257 kb on - strand, within CA264_12950at 3019.260 kb on + strand, within CA264_12950at 3019.308 kb on + strand, within CA264_12950at 3019.489 kb on + strandat 3019.494 kb on - strandat 3019.503 kb on + strandat 3019.574 kb on + strandat 3019.576 kb on + strandat 3019.580 kb on + strandat 3019.618 kb on + strandat 3019.618 kb on + strandat 3019.725 kb on - strandat 3019.817 kb on + strandat 3019.818 kb on - strandat 3019.822 kb on - strandat 3019.849 kb on - strandat 3019.938 kb on - strandat 3019.938 kb on - strandat 3020.039 kb on + strand, within CA264_12955at 3020.040 kb on - strand, within CA264_12955at 3020.108 kb on + strand, within CA264_12955at 3020.121 kb on + strand, within CA264_12955at 3020.122 kb on - strand, within CA264_12955at 3020.196 kb on + strand, within CA264_12955at 3020.304 kb on - strand, within CA264_12955at 3020.304 kb on - strand, within CA264_12955at 3020.373 kb on - strand, within CA264_12955at 3020.379 kb on + strand, within CA264_12955at 3020.443 kb on + strand, within CA264_12955at 3020.443 kb on + strand, within CA264_12955at 3020.444 kb on - strand, within CA264_12955at 3020.448 kb on + strand, within CA264_12955at 3020.448 kb on + strand, within CA264_12955at 3020.473 kb on - strand, within CA264_12955at 3020.483 kb on - strand, within CA264_12955at 3020.483 kb on - strand, within CA264_12955at 3020.511 kb on + strand, within CA264_12955at 3020.511 kb on + strand, within CA264_12955at 3020.511 kb on + strand, within CA264_12955at 3020.511 kb on + strand, within CA264_12955at 3020.512 kb on - strand, within CA264_12955at 3020.513 kb on + strand, within CA264_12955at 3020.514 kb on - strand, within CA264_12955at 3020.548 kb on + strand, within CA264_12955at 3020.549 kb on - strand, within CA264_12955at 3020.549 kb on - strand, within CA264_12955at 3020.551 kb on + strand, within CA264_12955at 3020.626 kb on + strandat 3020.652 kb on + strandat 3020.653 kb on - strandat 3020.653 kb on - strandat 3020.653 kb on - strandat 3020.654 kb on + strandat 3020.654 kb on + strandat 3020.655 kb on - strandat 3020.657 kb on + strandat 3020.657 kb on + strandat 3020.657 kb on + strandat 3020.658 kb on - strandat 3020.740 kb on + strandat 3020.788 kb on - strandat 3020.854 kb on - strandat 3020.894 kb on + strandat 3020.895 kb on - strandat 3021.150 kb on + strand, within CA264_12960at 3021.157 kb on + strand, within CA264_12960at 3021.158 kb on - strand, within CA264_12960at 3021.158 kb on - strand, within CA264_12960at 3021.222 kb on + strand, within CA264_12960at 3021.223 kb on - strand, within CA264_12960at 3021.344 kb on + strand, within CA264_12960at 3021.344 kb on + strand, within CA264_12960at 3021.344 kb on + strand, within CA264_12960at 3021.344 kb on + strand, within CA264_12960at 3021.345 kb on - strand, within CA264_12960at 3021.345 kb on - strand, within CA264_12960at 3021.345 kb on - strand, within CA264_12960at 3021.430 kb on - strand, within CA264_12960at 3021.435 kb on - strand, within CA264_12960at 3021.459 kb on + strand, within CA264_12960at 3021.548 kb on + strand, within CA264_12960at 3021.548 kb on + strand, within CA264_12960

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.0025 mg/ml
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3,018,885 + CA264_12950 0.51 -0.6
3,018,987 + CA264_12950 0.59 +0.8
3,018,987 + CA264_12950 0.59 -0.7
3,018,991 + CA264_12950 0.60 +0.8
3,018,991 + CA264_12950 0.60 +0.1
3,019,089 - CA264_12950 0.68 -1.1
3,019,134 + CA264_12950 0.71 +0.6
3,019,141 + CA264_12950 0.72 -0.2
3,019,186 - CA264_12950 0.76 +0.2
3,019,212 + CA264_12950 0.78 +1.9
3,019,212 + CA264_12950 0.78 +0.3
3,019,213 - CA264_12950 0.78 -0.2
3,019,257 - CA264_12950 0.82 +0.0
3,019,260 + CA264_12950 0.82 -0.5
3,019,308 + CA264_12950 0.86 -0.1
3,019,489 + -1.0
3,019,494 - -0.6
3,019,503 + -0.9
3,019,574 + +1.9
3,019,576 + -1.4
3,019,580 + -0.3
3,019,618 + +0.3
3,019,618 + -0.7
3,019,725 - -0.6
3,019,817 + -0.8
3,019,818 - +0.5
3,019,822 - +0.5
3,019,849 - -0.2
3,019,938 - -1.4
3,019,938 - -1.2
3,020,039 + CA264_12955 0.22 -1.3
3,020,040 - CA264_12955 0.22 -0.6
3,020,108 + CA264_12955 0.31 -0.1
3,020,121 + CA264_12955 0.33 -1.6
3,020,122 - CA264_12955 0.33 +0.3
3,020,196 + CA264_12955 0.43 +0.1
3,020,304 - CA264_12955 0.57 -0.9
3,020,304 - CA264_12955 0.57 -1.0
3,020,373 - CA264_12955 0.66 -1.1
3,020,379 + CA264_12955 0.66 +0.5
3,020,443 + CA264_12955 0.75 -1.2
3,020,443 + CA264_12955 0.75 -2.6
3,020,444 - CA264_12955 0.75 +0.5
3,020,448 + CA264_12955 0.75 -0.9
3,020,448 + CA264_12955 0.75 -0.7
3,020,473 - CA264_12955 0.79 -1.0
3,020,483 - CA264_12955 0.80 -0.4
3,020,483 - CA264_12955 0.80 -0.8
3,020,511 + CA264_12955 0.84 -1.4
3,020,511 + CA264_12955 0.84 -2.5
3,020,511 + CA264_12955 0.84 -0.9
3,020,511 + CA264_12955 0.84 -2.9
3,020,512 - CA264_12955 0.84 -2.1
3,020,513 + CA264_12955 0.84 -1.4
3,020,514 - CA264_12955 0.84 -0.8
3,020,548 + CA264_12955 0.88 -1.8
3,020,549 - CA264_12955 0.89 -0.2
3,020,549 - CA264_12955 0.89 -1.1
3,020,551 + CA264_12955 0.89 -0.8
3,020,626 + -2.8
3,020,652 + -1.0
3,020,653 - -0.6
3,020,653 - +0.9
3,020,653 - +1.5
3,020,654 + +0.1
3,020,654 + -0.3
3,020,655 - +0.1
3,020,657 + +0.3
3,020,657 + -1.3
3,020,657 + +0.2
3,020,658 - -1.1
3,020,740 + -0.6
3,020,788 - +0.7
3,020,854 - -0.2
3,020,894 + +0.8
3,020,895 - -2.1
3,021,150 + CA264_12960 0.16 +0.2
3,021,157 + CA264_12960 0.16 +0.1
3,021,158 - CA264_12960 0.16 -1.6
3,021,158 - CA264_12960 0.16 -2.4
3,021,222 + CA264_12960 0.19 +0.2
3,021,223 - CA264_12960 0.19 +0.1
3,021,344 + CA264_12960 0.25 +1.3
3,021,344 + CA264_12960 0.25 +0.7
3,021,344 + CA264_12960 0.25 +0.2
3,021,344 + CA264_12960 0.25 +1.1
3,021,345 - CA264_12960 0.25 +0.3
3,021,345 - CA264_12960 0.25 -0.5
3,021,345 - CA264_12960 0.25 +0.4
3,021,430 - CA264_12960 0.29 -0.3
3,021,435 - CA264_12960 0.30 -1.1
3,021,459 + CA264_12960 0.31 +0.5
3,021,548 + CA264_12960 0.35 +2.4
3,021,548 + CA264_12960 0.35 +0.9

Or see this region's nucleotide sequence