Experiment: m.b. Thallium(I) acetate 0.0025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_12915 and CA264_12920 are separated by 168 nucleotides CA264_12920 and CA264_12925 are separated by 88 nucleotides CA264_12925 and CA264_12930 are separated by 106 nucleotides
CA264_12915: CA264_12915 - oligopeptidase B, at 3,010,529 to 3,012,727
_12915
CA264_12920: CA264_12920 - N-acetylmuramoyl-L-alanine amidase, at 3,012,896 to 3,013,531
_12920
CA264_12925: CA264_12925 - hypothetical protein, at 3,013,620 to 3,014,410
_12925
CA264_12930: CA264_12930 - cell wall hydrolase, at 3,014,517 to 3,015,518
_12930
Position (kb)
3013
3014
3015 Strain fitness (log2 ratio)
-2
-1
0
1 at 3012.725 kb on + strand at 3012.751 kb on + strand at 3012.754 kb on - strand at 3012.814 kb on - strand at 3012.875 kb on + strand at 3012.880 kb on - strand at 3012.880 kb on - strand at 3013.059 kb on + strand, within CA264_12920 at 3013.148 kb on + strand, within CA264_12920 at 3013.245 kb on - strand, within CA264_12920 at 3013.389 kb on - strand, within CA264_12920 at 3013.389 kb on - strand, within CA264_12920 at 3013.390 kb on + strand, within CA264_12920 at 3013.392 kb on + strand, within CA264_12920 at 3013.392 kb on + strand, within CA264_12920 at 3013.431 kb on + strand, within CA264_12920 at 3013.432 kb on - strand, within CA264_12920 at 3013.484 kb on + strand at 3014.060 kb on + strand, within CA264_12925 at 3014.290 kb on - strand, within CA264_12925 at 3014.455 kb on + strand at 3014.490 kb on + strand at 3014.491 kb on - strand at 3014.519 kb on - strand at 3014.539 kb on + strand at 3014.540 kb on - strand at 3014.599 kb on - strand at 3014.680 kb on + strand, within CA264_12930 at 3014.680 kb on + strand, within CA264_12930 at 3014.703 kb on - strand, within CA264_12930 at 3014.826 kb on - strand, within CA264_12930 at 3014.832 kb on + strand, within CA264_12930 at 3014.832 kb on + strand, within CA264_12930 at 3014.832 kb on + strand, within CA264_12930 at 3014.878 kb on + strand, within CA264_12930 at 3014.879 kb on - strand, within CA264_12930 at 3014.975 kb on + strand, within CA264_12930 at 3014.975 kb on + strand, within CA264_12930 at 3014.976 kb on - strand, within CA264_12930 at 3014.981 kb on - strand, within CA264_12930 at 3014.981 kb on - strand, within CA264_12930 at 3015.036 kb on + strand, within CA264_12930 at 3015.142 kb on + strand, within CA264_12930 at 3015.142 kb on + strand, within CA264_12930 at 3015.249 kb on + strand, within CA264_12930 at 3015.252 kb on - strand, within CA264_12930
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.0025 mg/ml remove 3,012,725 + -2.4 3,012,751 + -1.0 3,012,754 - -0.1 3,012,814 - -1.2 3,012,875 + -0.0 3,012,880 - -2.5 3,012,880 - -1.6 3,013,059 + CA264_12920 0.26 -1.1 3,013,148 + CA264_12920 0.40 +0.2 3,013,245 - CA264_12920 0.55 -1.3 3,013,389 - CA264_12920 0.78 +1.1 3,013,389 - CA264_12920 0.78 -0.5 3,013,390 + CA264_12920 0.78 +0.9 3,013,392 + CA264_12920 0.78 +0.6 3,013,392 + CA264_12920 0.78 +1.3 3,013,431 + CA264_12920 0.84 +0.9 3,013,432 - CA264_12920 0.84 -0.8 3,013,484 + +1.0 3,014,060 + CA264_12925 0.56 -0.1 3,014,290 - CA264_12925 0.85 -1.2 3,014,455 + -0.4 3,014,490 + +0.6 3,014,491 - -0.4 3,014,519 - -1.2 3,014,539 + +0.2 3,014,540 - -0.0 3,014,599 - +0.4 3,014,680 + CA264_12930 0.16 +1.3 3,014,680 + CA264_12930 0.16 +0.3 3,014,703 - CA264_12930 0.19 -1.2 3,014,826 - CA264_12930 0.31 -1.0 3,014,832 + CA264_12930 0.31 +0.8 3,014,832 + CA264_12930 0.31 +0.7 3,014,832 + CA264_12930 0.31 +0.7 3,014,878 + CA264_12930 0.36 +0.7 3,014,879 - CA264_12930 0.36 -0.2 3,014,975 + CA264_12930 0.46 +0.4 3,014,975 + CA264_12930 0.46 +0.3 3,014,976 - CA264_12930 0.46 -0.1 3,014,981 - CA264_12930 0.46 -0.5 3,014,981 - CA264_12930 0.46 -0.0 3,015,036 + CA264_12930 0.52 +0.4 3,015,142 + CA264_12930 0.62 +1.3 3,015,142 + CA264_12930 0.62 +0.3 3,015,249 + CA264_12930 0.73 +0.5 3,015,252 - CA264_12930 0.73 -1.2
Or see this region's nucleotide sequence