Experiment: m.b. Thallium(I) acetate 0.0025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_10125 and CA264_10130 are separated by 317 nucleotides CA264_10130 and CA264_10135 are separated by 329 nucleotides
CA264_10125: CA264_10125 - hypothetical protein, at 2,348,328 to 2,349,182
_10125
CA264_10130: CA264_10130 - TonB-dependent receptor, at 2,349,500 to 2,351,926
_10130
CA264_10135: CA264_10135 - hypothetical protein, at 2,352,256 to 2,353,290
_10135
Position (kb)
2349
2350
2351
2352 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2348.502 kb on + strand, within CA264_10125 at 2348.503 kb on - strand, within CA264_10125 at 2348.542 kb on + strand, within CA264_10125 at 2348.581 kb on + strand, within CA264_10125 at 2348.581 kb on + strand, within CA264_10125 at 2348.602 kb on + strand, within CA264_10125 at 2348.602 kb on + strand, within CA264_10125 at 2348.602 kb on + strand, within CA264_10125 at 2348.602 kb on + strand, within CA264_10125 at 2348.708 kb on - strand, within CA264_10125 at 2348.776 kb on + strand, within CA264_10125 at 2348.817 kb on - strand, within CA264_10125 at 2348.843 kb on + strand, within CA264_10125 at 2348.884 kb on + strand, within CA264_10125 at 2348.884 kb on + strand, within CA264_10125 at 2348.885 kb on - strand, within CA264_10125 at 2348.998 kb on + strand, within CA264_10125 at 2349.119 kb on + strand at 2349.142 kb on - strand at 2349.146 kb on + strand at 2349.146 kb on + strand at 2349.147 kb on - strand at 2349.147 kb on - strand at 2349.147 kb on - strand at 2349.182 kb on + strand at 2349.182 kb on + strand at 2349.183 kb on - strand at 2349.183 kb on - strand at 2349.183 kb on - strand at 2349.183 kb on - strand at 2349.183 kb on - strand at 2349.186 kb on + strand at 2349.187 kb on - strand at 2349.187 kb on - strand at 2349.187 kb on - strand at 2349.187 kb on - strand at 2349.201 kb on - strand at 2349.201 kb on - strand at 2349.226 kb on + strand at 2349.227 kb on - strand at 2349.286 kb on + strand at 2349.286 kb on + strand at 2349.296 kb on - strand at 2349.300 kb on + strand at 2349.300 kb on + strand at 2349.300 kb on + strand at 2349.318 kb on - strand at 2349.388 kb on - strand at 2349.397 kb on + strand at 2349.398 kb on - strand at 2349.398 kb on - strand at 2349.422 kb on + strand at 2349.484 kb on + strand at 2349.485 kb on - strand at 2349.485 kb on - strand at 2349.485 kb on - strand at 2349.594 kb on - strand at 2349.618 kb on + strand at 2349.619 kb on - strand at 2349.647 kb on + strand at 2349.680 kb on - strand at 2349.683 kb on + strand at 2349.685 kb on + strand at 2349.685 kb on + strand at 2349.685 kb on + strand at 2349.760 kb on + strand, within CA264_10130 at 2349.915 kb on + strand, within CA264_10130 at 2349.916 kb on - strand, within CA264_10130 at 2349.916 kb on - strand, within CA264_10130 at 2349.916 kb on - strand, within CA264_10130 at 2349.934 kb on + strand, within CA264_10130 at 2349.944 kb on - strand, within CA264_10130 at 2349.944 kb on - strand, within CA264_10130 at 2349.988 kb on + strand, within CA264_10130 at 2349.989 kb on - strand, within CA264_10130 at 2350.031 kb on + strand, within CA264_10130 at 2350.031 kb on + strand, within CA264_10130 at 2350.031 kb on + strand, within CA264_10130 at 2350.031 kb on + strand, within CA264_10130 at 2350.032 kb on - strand, within CA264_10130 at 2350.032 kb on - strand, within CA264_10130 at 2350.033 kb on + strand, within CA264_10130 at 2350.034 kb on - strand, within CA264_10130 at 2350.111 kb on + strand, within CA264_10130 at 2350.113 kb on + strand, within CA264_10130 at 2350.166 kb on + strand, within CA264_10130 at 2350.192 kb on + strand, within CA264_10130 at 2350.193 kb on - strand, within CA264_10130 at 2350.194 kb on + strand, within CA264_10130 at 2350.195 kb on - strand, within CA264_10130 at 2350.206 kb on + strand, within CA264_10130 at 2350.206 kb on + strand, within CA264_10130 at 2350.223 kb on - strand, within CA264_10130 at 2350.244 kb on + strand, within CA264_10130 at 2350.245 kb on - strand, within CA264_10130 at 2350.247 kb on + strand, within CA264_10130 at 2350.260 kb on + strand, within CA264_10130 at 2350.260 kb on + strand, within CA264_10130 at 2350.290 kb on - strand, within CA264_10130 at 2350.437 kb on + strand, within CA264_10130 at 2350.438 kb on - strand, within CA264_10130 at 2350.455 kb on + strand, within CA264_10130 at 2350.456 kb on - strand, within CA264_10130 at 2350.456 kb on - strand, within CA264_10130 at 2350.457 kb on + strand, within CA264_10130 at 2350.458 kb on - strand, within CA264_10130 at 2350.458 kb on - strand, within CA264_10130 at 2350.458 kb on - strand, within CA264_10130 at 2350.471 kb on - strand, within CA264_10130 at 2350.527 kb on + strand, within CA264_10130 at 2350.544 kb on - strand, within CA264_10130 at 2350.544 kb on - strand, within CA264_10130 at 2350.550 kb on + strand, within CA264_10130 at 2350.550 kb on + strand, within CA264_10130 at 2350.562 kb on + strand, within CA264_10130 at 2350.585 kb on + strand, within CA264_10130 at 2350.629 kb on + strand, within CA264_10130 at 2350.631 kb on + strand, within CA264_10130 at 2350.632 kb on - strand, within CA264_10130 at 2350.632 kb on - strand, within CA264_10130 at 2350.632 kb on - strand, within CA264_10130 at 2350.632 kb on - strand, within CA264_10130 at 2350.634 kb on - strand, within CA264_10130 at 2350.634 kb on - strand, within CA264_10130 at 2350.634 kb on - strand, within CA264_10130 at 2350.639 kb on - strand, within CA264_10130 at 2350.686 kb on - strand, within CA264_10130 at 2350.749 kb on + strand, within CA264_10130 at 2350.749 kb on + strand, within CA264_10130 at 2350.749 kb on + strand, within CA264_10130 at 2350.750 kb on - strand, within CA264_10130 at 2350.750 kb on - strand, within CA264_10130 at 2350.755 kb on - strand, within CA264_10130 at 2350.755 kb on - strand, within CA264_10130 at 2350.800 kb on + strand, within CA264_10130 at 2350.800 kb on + strand, within CA264_10130 at 2350.856 kb on + strand, within CA264_10130 at 2350.857 kb on - strand, within CA264_10130 at 2350.857 kb on - strand, within CA264_10130 at 2350.860 kb on + strand, within CA264_10130 at 2350.861 kb on - strand, within CA264_10130 at 2350.861 kb on - strand, within CA264_10130 at 2350.893 kb on + strand, within CA264_10130 at 2350.893 kb on + strand, within CA264_10130 at 2350.894 kb on - strand, within CA264_10130 at 2350.894 kb on - strand, within CA264_10130 at 2350.952 kb on + strand, within CA264_10130 at 2350.953 kb on - strand, within CA264_10130 at 2350.957 kb on + strand, within CA264_10130 at 2350.958 kb on - strand, within CA264_10130 at 2350.958 kb on - strand, within CA264_10130 at 2350.958 kb on - strand, within CA264_10130 at 2350.977 kb on + strand, within CA264_10130 at 2350.978 kb on - strand, within CA264_10130 at 2351.080 kb on + strand, within CA264_10130 at 2351.149 kb on - strand, within CA264_10130 at 2351.173 kb on - strand, within CA264_10130 at 2351.190 kb on + strand, within CA264_10130 at 2351.191 kb on - strand, within CA264_10130 at 2351.206 kb on - strand, within CA264_10130 at 2351.207 kb on + strand, within CA264_10130 at 2351.207 kb on + strand, within CA264_10130 at 2351.208 kb on - strand, within CA264_10130 at 2351.208 kb on - strand, within CA264_10130 at 2351.208 kb on - strand, within CA264_10130 at 2351.208 kb on - strand, within CA264_10130 at 2351.213 kb on - strand, within CA264_10130 at 2351.222 kb on - strand, within CA264_10130 at 2351.320 kb on + strand, within CA264_10130 at 2351.339 kb on - strand, within CA264_10130 at 2351.376 kb on + strand, within CA264_10130 at 2351.377 kb on - strand, within CA264_10130 at 2351.430 kb on - strand, within CA264_10130 at 2351.431 kb on + strand, within CA264_10130 at 2351.431 kb on + strand, within CA264_10130 at 2351.468 kb on - strand, within CA264_10130 at 2351.534 kb on - strand, within CA264_10130 at 2351.571 kb on - strand, within CA264_10130 at 2351.574 kb on - strand, within CA264_10130 at 2351.574 kb on - strand, within CA264_10130 at 2351.611 kb on + strand, within CA264_10130 at 2351.669 kb on + strand, within CA264_10130 at 2351.694 kb on - strand at 2351.884 kb on + strand at 2351.885 kb on - strand at 2351.885 kb on - strand at 2351.927 kb on - strand at 2352.007 kb on - strand at 2352.055 kb on + strand at 2352.057 kb on + strand at 2352.106 kb on + strand at 2352.142 kb on + strand at 2352.172 kb on - strand at 2352.172 kb on - strand at 2352.175 kb on - strand at 2352.203 kb on + strand at 2352.207 kb on + strand at 2352.237 kb on - strand at 2352.282 kb on + strand at 2352.282 kb on + strand at 2352.285 kb on + strand at 2352.286 kb on - strand at 2352.306 kb on - strand at 2352.323 kb on - strand at 2352.325 kb on + strand at 2352.477 kb on - strand, within CA264_10135 at 2352.490 kb on + strand, within CA264_10135 at 2352.491 kb on - strand, within CA264_10135 at 2352.491 kb on - strand, within CA264_10135 at 2352.491 kb on - strand, within CA264_10135 at 2352.500 kb on + strand, within CA264_10135 at 2352.553 kb on + strand, within CA264_10135 at 2352.554 kb on - strand, within CA264_10135 at 2352.633 kb on + strand, within CA264_10135 at 2352.634 kb on - strand, within CA264_10135 at 2352.634 kb on - strand, within CA264_10135 at 2352.650 kb on - strand, within CA264_10135 at 2352.653 kb on - strand, within CA264_10135 at 2352.653 kb on - strand, within CA264_10135 at 2352.677 kb on + strand, within CA264_10135 at 2352.814 kb on + strand, within CA264_10135 at 2352.815 kb on - strand, within CA264_10135 at 2352.854 kb on + strand, within CA264_10135
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.0025 mg/ml remove 2,348,502 + CA264_10125 0.20 +0.2 2,348,503 - CA264_10125 0.20 -0.7 2,348,542 + CA264_10125 0.25 +0.7 2,348,581 + CA264_10125 0.30 +0.4 2,348,581 + CA264_10125 0.30 +0.3 2,348,602 + CA264_10125 0.32 +0.1 2,348,602 + CA264_10125 0.32 +0.8 2,348,602 + CA264_10125 0.32 +2.0 2,348,602 + CA264_10125 0.32 -0.6 2,348,708 - CA264_10125 0.44 +0.3 2,348,776 + CA264_10125 0.52 -0.1 2,348,817 - CA264_10125 0.57 -1.9 2,348,843 + CA264_10125 0.60 -1.4 2,348,884 + CA264_10125 0.65 +1.8 2,348,884 + CA264_10125 0.65 +0.8 2,348,885 - CA264_10125 0.65 -2.0 2,348,998 + CA264_10125 0.78 +0.4 2,349,119 + -0.1 2,349,142 - -2.2 2,349,146 + +0.1 2,349,146 + -0.4 2,349,147 - +0.3 2,349,147 - -1.3 2,349,147 - -1.9 2,349,182 + -0.4 2,349,182 + -0.3 2,349,183 - -1.5 2,349,183 - -3.4 2,349,183 - -1.0 2,349,183 - -0.3 2,349,183 - -0.4 2,349,186 + +0.5 2,349,187 - -0.9 2,349,187 - -2.1 2,349,187 - -0.9 2,349,187 - -1.2 2,349,201 - -0.3 2,349,201 - -2.5 2,349,226 + -0.1 2,349,227 - -1.4 2,349,286 + -0.9 2,349,286 + -1.0 2,349,296 - -0.5 2,349,300 + +0.5 2,349,300 + -0.7 2,349,300 + +0.0 2,349,318 - -1.0 2,349,388 - -1.9 2,349,397 + +0.0 2,349,398 - +0.5 2,349,398 - -1.0 2,349,422 + +1.0 2,349,484 + +0.4 2,349,485 - +0.3 2,349,485 - -1.8 2,349,485 - -2.8 2,349,594 - -0.9 2,349,618 + -0.4 2,349,619 - -0.7 2,349,647 + +0.3 2,349,680 - -0.6 2,349,683 + -0.2 2,349,685 + +1.3 2,349,685 + +0.8 2,349,685 + +1.1 2,349,760 + CA264_10130 0.11 +0.5 2,349,915 + CA264_10130 0.17 +0.2 2,349,916 - CA264_10130 0.17 -0.7 2,349,916 - CA264_10130 0.17 -0.6 2,349,916 - CA264_10130 0.17 -1.5 2,349,934 + CA264_10130 0.18 +1.5 2,349,944 - CA264_10130 0.18 +0.8 2,349,944 - CA264_10130 0.18 +1.4 2,349,988 + CA264_10130 0.20 -0.5 2,349,989 - CA264_10130 0.20 +0.3 2,350,031 + CA264_10130 0.22 +0.3 2,350,031 + CA264_10130 0.22 -0.6 2,350,031 + CA264_10130 0.22 +0.3 2,350,031 + CA264_10130 0.22 +0.9 2,350,032 - CA264_10130 0.22 -0.1 2,350,032 - CA264_10130 0.22 -1.5 2,350,033 + CA264_10130 0.22 +0.7 2,350,034 - CA264_10130 0.22 -0.7 2,350,111 + CA264_10130 0.25 +0.9 2,350,113 + CA264_10130 0.25 -1.2 2,350,166 + CA264_10130 0.27 -0.4 2,350,192 + CA264_10130 0.29 -0.4 2,350,193 - CA264_10130 0.29 +0.1 2,350,194 + CA264_10130 0.29 +0.2 2,350,195 - CA264_10130 0.29 -0.8 2,350,206 + CA264_10130 0.29 +0.1 2,350,206 + CA264_10130 0.29 -0.6 2,350,223 - CA264_10130 0.30 -1.6 2,350,244 + CA264_10130 0.31 -0.6 2,350,245 - CA264_10130 0.31 +1.8 2,350,247 + CA264_10130 0.31 +1.5 2,350,260 + CA264_10130 0.31 -0.1 2,350,260 + CA264_10130 0.31 +0.1 2,350,290 - CA264_10130 0.33 +1.0 2,350,437 + CA264_10130 0.39 +0.0 2,350,438 - CA264_10130 0.39 -2.1 2,350,455 + CA264_10130 0.39 -0.9 2,350,456 - CA264_10130 0.39 -0.5 2,350,456 - CA264_10130 0.39 -0.1 2,350,457 + CA264_10130 0.39 -0.8 2,350,458 - CA264_10130 0.39 -0.9 2,350,458 - CA264_10130 0.39 -1.3 2,350,458 - CA264_10130 0.39 -0.7 2,350,471 - CA264_10130 0.40 -0.4 2,350,527 + CA264_10130 0.42 +0.1 2,350,544 - CA264_10130 0.43 -0.5 2,350,544 - CA264_10130 0.43 -0.8 2,350,550 + CA264_10130 0.43 -1.7 2,350,550 + CA264_10130 0.43 +0.5 2,350,562 + CA264_10130 0.44 -0.1 2,350,585 + CA264_10130 0.45 -0.3 2,350,629 + CA264_10130 0.47 -0.1 2,350,631 + CA264_10130 0.47 +0.0 2,350,632 - CA264_10130 0.47 -1.1 2,350,632 - CA264_10130 0.47 -0.2 2,350,632 - CA264_10130 0.47 -1.5 2,350,632 - CA264_10130 0.47 -0.0 2,350,634 - CA264_10130 0.47 +0.8 2,350,634 - CA264_10130 0.47 -0.5 2,350,634 - CA264_10130 0.47 -1.7 2,350,639 - CA264_10130 0.47 -0.6 2,350,686 - CA264_10130 0.49 +0.9 2,350,749 + CA264_10130 0.51 +0.9 2,350,749 + CA264_10130 0.51 -0.1 2,350,749 + CA264_10130 0.51 +0.1 2,350,750 - CA264_10130 0.52 -0.9 2,350,750 - CA264_10130 0.52 -0.5 2,350,755 - CA264_10130 0.52 -0.7 2,350,755 - CA264_10130 0.52 -1.5 2,350,800 + CA264_10130 0.54 -0.0 2,350,800 + CA264_10130 0.54 +0.2 2,350,856 + CA264_10130 0.56 -0.1 2,350,857 - CA264_10130 0.56 +0.1 2,350,857 - CA264_10130 0.56 -0.7 2,350,860 + CA264_10130 0.56 +0.1 2,350,861 - CA264_10130 0.56 +1.6 2,350,861 - CA264_10130 0.56 +0.1 2,350,893 + CA264_10130 0.57 +0.9 2,350,893 + CA264_10130 0.57 +0.2 2,350,894 - CA264_10130 0.57 -0.6 2,350,894 - CA264_10130 0.57 +2.2 2,350,952 + CA264_10130 0.60 -0.4 2,350,953 - CA264_10130 0.60 -0.5 2,350,957 + CA264_10130 0.60 +0.5 2,350,958 - CA264_10130 0.60 +0.0 2,350,958 - CA264_10130 0.60 -0.1 2,350,958 - CA264_10130 0.60 -0.3 2,350,977 + CA264_10130 0.61 -0.4 2,350,978 - CA264_10130 0.61 -0.1 2,351,080 + CA264_10130 0.65 +0.3 2,351,149 - CA264_10130 0.68 +0.7 2,351,173 - CA264_10130 0.69 +0.0 2,351,190 + CA264_10130 0.70 +0.6 2,351,191 - CA264_10130 0.70 -1.5 2,351,206 - CA264_10130 0.70 -0.4 2,351,207 + CA264_10130 0.70 +0.3 2,351,207 + CA264_10130 0.70 +1.2 2,351,208 - CA264_10130 0.70 +0.1 2,351,208 - CA264_10130 0.70 -2.0 2,351,208 - CA264_10130 0.70 +0.8 2,351,208 - CA264_10130 0.70 +2.0 2,351,213 - CA264_10130 0.71 -0.3 2,351,222 - CA264_10130 0.71 -2.2 2,351,320 + CA264_10130 0.75 -2.0 2,351,339 - CA264_10130 0.76 +1.6 2,351,376 + CA264_10130 0.77 -0.2 2,351,377 - CA264_10130 0.77 -0.3 2,351,430 - CA264_10130 0.80 +1.3 2,351,431 + CA264_10130 0.80 -0.7 2,351,431 + CA264_10130 0.80 -0.1 2,351,468 - CA264_10130 0.81 -0.3 2,351,534 - CA264_10130 0.84 -0.0 2,351,571 - CA264_10130 0.85 -1.0 2,351,574 - CA264_10130 0.85 -1.2 2,351,574 - CA264_10130 0.85 -0.9 2,351,611 + CA264_10130 0.87 +0.6 2,351,669 + CA264_10130 0.89 -0.0 2,351,694 - -0.1 2,351,884 + +1.5 2,351,885 - -1.0 2,351,885 - -1.3 2,351,927 - -0.4 2,352,007 - -0.2 2,352,055 + -0.0 2,352,057 + +0.6 2,352,106 + -0.5 2,352,142 + +0.1 2,352,172 - +0.0 2,352,172 - +0.8 2,352,175 - +0.9 2,352,203 + -1.4 2,352,207 + -0.0 2,352,237 - +0.8 2,352,282 + -0.5 2,352,282 + +0.3 2,352,285 + -0.4 2,352,286 - -0.3 2,352,306 - -0.6 2,352,323 - -0.6 2,352,325 + -0.8 2,352,477 - CA264_10135 0.21 +1.6 2,352,490 + CA264_10135 0.23 +0.3 2,352,491 - CA264_10135 0.23 -1.2 2,352,491 - CA264_10135 0.23 -0.9 2,352,491 - CA264_10135 0.23 -0.4 2,352,500 + CA264_10135 0.24 +0.2 2,352,553 + CA264_10135 0.29 +1.9 2,352,554 - CA264_10135 0.29 -0.5 2,352,633 + CA264_10135 0.36 -1.3 2,352,634 - CA264_10135 0.37 +0.5 2,352,634 - CA264_10135 0.37 +0.7 2,352,650 - CA264_10135 0.38 +0.1 2,352,653 - CA264_10135 0.38 +0.2 2,352,653 - CA264_10135 0.38 +1.0 2,352,677 + CA264_10135 0.41 -0.8 2,352,814 + CA264_10135 0.54 +0.4 2,352,815 - CA264_10135 0.54 -0.4 2,352,854 + CA264_10135 0.58 -0.7
Or see this region's nucleotide sequence