Experiment: m.b. Thallium(I) acetate 0.0025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_09260 and CA264_09265 are separated by 162 nucleotides CA264_09265 and CA264_09270 are separated by 15 nucleotides CA264_09270 and CA264_09275 are separated by 185 nucleotides
CA264_09260: CA264_09260 - malate synthase A, at 2,166,092 to 2,167,690
_09260
CA264_09265: CA264_09265 - XRE family transcriptional regulator, at 2,167,853 to 2,169,328
_09265
CA264_09270: CA264_09270 - tRNA-specific adenosine deaminase, at 2,169,344 to 2,169,781
_09270
CA264_09275: CA264_09275 - epimerase, at 2,169,967 to 2,171,439
_09275
Position (kb)
2167
2168
2169
2170 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2166.863 kb on + strand, within CA264_09260 at 2166.899 kb on - strand, within CA264_09260 at 2167.061 kb on - strand, within CA264_09260 at 2167.123 kb on - strand, within CA264_09260 at 2167.151 kb on + strand, within CA264_09260 at 2167.151 kb on + strand, within CA264_09260 at 2167.152 kb on - strand, within CA264_09260 at 2167.152 kb on - strand, within CA264_09260 at 2167.152 kb on - strand, within CA264_09260 at 2167.511 kb on + strand, within CA264_09260 at 2167.511 kb on + strand, within CA264_09260 at 2167.512 kb on - strand, within CA264_09260 at 2167.631 kb on + strand at 2167.632 kb on - strand at 2167.690 kb on + strand at 2167.831 kb on + strand at 2167.831 kb on + strand at 2167.832 kb on - strand at 2168.051 kb on + strand, within CA264_09265 at 2168.051 kb on + strand, within CA264_09265 at 2168.052 kb on - strand, within CA264_09265 at 2168.052 kb on - strand, within CA264_09265 at 2168.052 kb on - strand, within CA264_09265 at 2168.058 kb on - strand, within CA264_09265 at 2168.198 kb on - strand, within CA264_09265 at 2168.289 kb on - strand, within CA264_09265 at 2168.309 kb on + strand, within CA264_09265 at 2168.309 kb on + strand, within CA264_09265 at 2168.355 kb on - strand, within CA264_09265 at 2168.406 kb on + strand, within CA264_09265 at 2168.407 kb on - strand, within CA264_09265 at 2168.580 kb on + strand, within CA264_09265 at 2168.600 kb on + strand, within CA264_09265 at 2168.653 kb on + strand, within CA264_09265 at 2168.654 kb on - strand, within CA264_09265 at 2168.663 kb on + strand, within CA264_09265 at 2168.774 kb on + strand, within CA264_09265 at 2168.774 kb on + strand, within CA264_09265 at 2168.774 kb on + strand, within CA264_09265 at 2168.774 kb on + strand, within CA264_09265 at 2168.775 kb on - strand, within CA264_09265 at 2168.775 kb on - strand, within CA264_09265 at 2168.775 kb on - strand, within CA264_09265 at 2168.776 kb on + strand, within CA264_09265 at 2168.777 kb on - strand, within CA264_09265 at 2168.891 kb on - strand, within CA264_09265 at 2168.891 kb on - strand, within CA264_09265 at 2168.892 kb on + strand, within CA264_09265 at 2168.892 kb on + strand, within CA264_09265 at 2168.892 kb on + strand, within CA264_09265 at 2168.892 kb on + strand, within CA264_09265 at 2168.892 kb on + strand, within CA264_09265 at 2168.896 kb on + strand, within CA264_09265 at 2168.896 kb on + strand, within CA264_09265 at 2168.896 kb on + strand, within CA264_09265 at 2168.897 kb on - strand, within CA264_09265 at 2168.897 kb on - strand, within CA264_09265 at 2169.051 kb on - strand, within CA264_09265 at 2169.072 kb on - strand, within CA264_09265 at 2169.116 kb on - strand, within CA264_09265 at 2169.187 kb on + strand at 2169.232 kb on - strand at 2169.265 kb on - strand at 2169.265 kb on - strand at 2169.265 kb on - strand at 2169.388 kb on + strand, within CA264_09270 at 2169.388 kb on + strand, within CA264_09270 at 2169.564 kb on + strand, within CA264_09270 at 2169.735 kb on + strand, within CA264_09270 at 2169.808 kb on - strand at 2169.809 kb on + strand at 2169.809 kb on + strand at 2169.810 kb on - strand at 2169.810 kb on - strand at 2169.813 kb on - strand at 2169.858 kb on - strand at 2169.871 kb on + strand at 2169.872 kb on - strand at 2169.895 kb on + strand at 2169.899 kb on + strand at 2169.900 kb on - strand at 2169.929 kb on - strand at 2169.929 kb on - strand at 2169.952 kb on - strand at 2169.956 kb on + strand at 2169.956 kb on + strand at 2169.966 kb on + strand at 2169.967 kb on - strand at 2169.974 kb on + strand at 2169.974 kb on + strand at 2169.975 kb on - strand at 2169.997 kb on + strand at 2170.046 kb on + strand at 2170.046 kb on + strand at 2170.106 kb on + strand at 2170.107 kb on - strand at 2170.107 kb on - strand at 2170.115 kb on + strand, within CA264_09275 at 2170.116 kb on - strand, within CA264_09275 at 2170.116 kb on - strand, within CA264_09275 at 2170.127 kb on + strand, within CA264_09275 at 2170.127 kb on + strand, within CA264_09275 at 2170.158 kb on + strand, within CA264_09275 at 2170.158 kb on + strand, within CA264_09275 at 2170.159 kb on - strand, within CA264_09275 at 2170.159 kb on - strand, within CA264_09275 at 2170.159 kb on - strand, within CA264_09275 at 2170.164 kb on + strand, within CA264_09275 at 2170.164 kb on + strand, within CA264_09275 at 2170.164 kb on + strand, within CA264_09275 at 2170.165 kb on - strand, within CA264_09275 at 2170.165 kb on - strand, within CA264_09275 at 2170.165 kb on - strand, within CA264_09275 at 2170.165 kb on - strand, within CA264_09275 at 2170.165 kb on - strand, within CA264_09275 at 2170.291 kb on + strand, within CA264_09275
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.0025 mg/ml remove 2,166,863 + CA264_09260 0.48 +2.2 2,166,899 - CA264_09260 0.50 -2.9 2,167,061 - CA264_09260 0.61 -1.5 2,167,123 - CA264_09260 0.64 -1.1 2,167,151 + CA264_09260 0.66 +0.2 2,167,151 + CA264_09260 0.66 +0.3 2,167,152 - CA264_09260 0.66 -1.6 2,167,152 - CA264_09260 0.66 -0.8 2,167,152 - CA264_09260 0.66 +0.1 2,167,511 + CA264_09260 0.89 +1.2 2,167,511 + CA264_09260 0.89 -0.7 2,167,512 - CA264_09260 0.89 -0.5 2,167,631 + +0.1 2,167,632 - +0.3 2,167,690 + +0.3 2,167,831 + +0.6 2,167,831 + +0.4 2,167,832 - -1.0 2,168,051 + CA264_09265 0.13 +0.8 2,168,051 + CA264_09265 0.13 +0.3 2,168,052 - CA264_09265 0.13 -1.5 2,168,052 - CA264_09265 0.13 -0.6 2,168,052 - CA264_09265 0.13 -0.2 2,168,058 - CA264_09265 0.14 +2.0 2,168,198 - CA264_09265 0.23 +0.3 2,168,289 - CA264_09265 0.30 +0.3 2,168,309 + CA264_09265 0.31 +0.6 2,168,309 + CA264_09265 0.31 -0.7 2,168,355 - CA264_09265 0.34 -0.7 2,168,406 + CA264_09265 0.37 -0.0 2,168,407 - CA264_09265 0.38 +1.2 2,168,580 + CA264_09265 0.49 +0.2 2,168,600 + CA264_09265 0.51 +0.7 2,168,653 + CA264_09265 0.54 +1.2 2,168,654 - CA264_09265 0.54 -0.0 2,168,663 + CA264_09265 0.55 -0.9 2,168,774 + CA264_09265 0.62 +0.8 2,168,774 + CA264_09265 0.62 -0.4 2,168,774 + CA264_09265 0.62 -0.6 2,168,774 + CA264_09265 0.62 +0.6 2,168,775 - CA264_09265 0.62 -0.1 2,168,775 - CA264_09265 0.62 +0.5 2,168,775 - CA264_09265 0.62 +0.0 2,168,776 + CA264_09265 0.63 -1.7 2,168,777 - CA264_09265 0.63 +0.5 2,168,891 - CA264_09265 0.70 +1.4 2,168,891 - CA264_09265 0.70 +0.2 2,168,892 + CA264_09265 0.70 -1.2 2,168,892 + CA264_09265 0.70 +0.1 2,168,892 + CA264_09265 0.70 -0.4 2,168,892 + CA264_09265 0.70 -0.8 2,168,892 + CA264_09265 0.70 -1.6 2,168,896 + CA264_09265 0.71 +1.6 2,168,896 + CA264_09265 0.71 +1.1 2,168,896 + CA264_09265 0.71 -1.1 2,168,897 - CA264_09265 0.71 -2.4 2,168,897 - CA264_09265 0.71 -0.2 2,169,051 - CA264_09265 0.81 +0.4 2,169,072 - CA264_09265 0.83 +0.3 2,169,116 - CA264_09265 0.86 -1.3 2,169,187 + -1.3 2,169,232 - +1.2 2,169,265 - +0.4 2,169,265 - +0.4 2,169,265 - -0.8 2,169,388 + CA264_09270 0.10 +0.1 2,169,388 + CA264_09270 0.10 +0.4 2,169,564 + CA264_09270 0.50 +2.5 2,169,735 + CA264_09270 0.89 -0.1 2,169,808 - -1.6 2,169,809 + -0.5 2,169,809 + -1.5 2,169,810 - -0.9 2,169,810 - -1.9 2,169,813 - +0.1 2,169,858 - -2.0 2,169,871 + -1.0 2,169,872 - -2.6 2,169,895 + -1.8 2,169,899 + -1.2 2,169,900 - -0.6 2,169,929 - -0.8 2,169,929 - -0.6 2,169,952 - -1.6 2,169,956 + -1.6 2,169,956 + -2.4 2,169,966 + -2.0 2,169,967 - -0.1 2,169,974 + -0.7 2,169,974 + -0.6 2,169,975 - -0.4 2,169,997 + +0.1 2,170,046 + -0.8 2,170,046 + -2.4 2,170,106 + -1.0 2,170,107 - -0.6 2,170,107 - -0.1 2,170,115 + CA264_09275 0.10 -1.4 2,170,116 - CA264_09275 0.10 -0.6 2,170,116 - CA264_09275 0.10 -1.5 2,170,127 + CA264_09275 0.11 -1.2 2,170,127 + CA264_09275 0.11 -0.2 2,170,158 + CA264_09275 0.13 -0.8 2,170,158 + CA264_09275 0.13 -0.7 2,170,159 - CA264_09275 0.13 -0.8 2,170,159 - CA264_09275 0.13 +0.3 2,170,159 - CA264_09275 0.13 +1.8 2,170,164 + CA264_09275 0.13 +0.2 2,170,164 + CA264_09275 0.13 -0.5 2,170,164 + CA264_09275 0.13 -1.9 2,170,165 - CA264_09275 0.13 +0.1 2,170,165 - CA264_09275 0.13 -1.4 2,170,165 - CA264_09275 0.13 -2.9 2,170,165 - CA264_09275 0.13 -0.6 2,170,165 - CA264_09275 0.13 -0.7 2,170,291 + CA264_09275 0.22 -0.1
Or see this region's nucleotide sequence