Experiment: m.b. Thallium(I) acetate 0.0025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_09110 and CA264_09115 are separated by 554 nucleotides CA264_09115 and CA264_09120 are separated by 105 nucleotides
CA264_09110: CA264_09110 - mechanosensitive ion channel protein MscS, at 2,133,355 to 2,134,275
_09110
CA264_09115: CA264_09115 - hypothetical protein, at 2,134,830 to 2,135,507
_09115
CA264_09120: CA264_09120 - galactose-1-epimerase, at 2,135,613 to 2,136,797
_09120
Position (kb)
2134
2135
2136 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 2133.942 kb on + strand, within CA264_09110 at 2133.945 kb on + strand, within CA264_09110 at 2133.946 kb on - strand, within CA264_09110 at 2134.009 kb on + strand, within CA264_09110 at 2134.010 kb on - strand, within CA264_09110 at 2134.056 kb on - strand, within CA264_09110 at 2134.092 kb on - strand, within CA264_09110 at 2134.092 kb on - strand, within CA264_09110 at 2134.220 kb on + strand at 2134.221 kb on - strand at 2134.290 kb on - strand at 2134.368 kb on - strand at 2134.368 kb on - strand at 2134.368 kb on - strand at 2134.368 kb on - strand at 2134.368 kb on - strand at 2134.376 kb on + strand at 2134.386 kb on + strand at 2134.387 kb on - strand at 2134.391 kb on - strand at 2134.391 kb on - strand at 2134.391 kb on - strand at 2134.391 kb on - strand at 2134.391 kb on - strand at 2134.395 kb on + strand at 2134.395 kb on + strand at 2134.396 kb on - strand at 2134.419 kb on + strand at 2134.420 kb on - strand at 2134.537 kb on - strand at 2134.580 kb on + strand at 2134.581 kb on - strand at 2134.589 kb on + strand at 2134.727 kb on + strand at 2134.815 kb on + strand at 2134.843 kb on + strand at 2134.863 kb on - strand at 2134.871 kb on + strand at 2134.872 kb on - strand at 2134.896 kb on + strand at 2134.896 kb on + strand at 2134.897 kb on - strand at 2134.905 kb on + strand, within CA264_09115 at 2135.041 kb on - strand, within CA264_09115 at 2135.194 kb on + strand, within CA264_09115 at 2135.195 kb on - strand, within CA264_09115 at 2135.195 kb on - strand, within CA264_09115 at 2135.195 kb on - strand, within CA264_09115 at 2135.253 kb on + strand, within CA264_09115 at 2135.254 kb on - strand, within CA264_09115 at 2135.313 kb on + strand, within CA264_09115 at 2135.511 kb on + strand at 2135.515 kb on + strand at 2135.516 kb on - strand at 2135.516 kb on - strand at 2135.571 kb on + strand at 2135.576 kb on + strand at 2135.595 kb on - strand at 2135.612 kb on + strand at 2135.674 kb on + strand at 2135.723 kb on + strand at 2135.742 kb on - strand, within CA264_09120 at 2135.805 kb on + strand, within CA264_09120 at 2135.806 kb on - strand, within CA264_09120 at 2135.844 kb on - strand, within CA264_09120 at 2135.844 kb on - strand, within CA264_09120 at 2135.850 kb on + strand, within CA264_09120 at 2135.937 kb on + strand, within CA264_09120 at 2136.029 kb on + strand, within CA264_09120 at 2136.030 kb on - strand, within CA264_09120 at 2136.030 kb on - strand, within CA264_09120 at 2136.030 kb on - strand, within CA264_09120 at 2136.030 kb on - strand, within CA264_09120 at 2136.030 kb on - strand, within CA264_09120 at 2136.071 kb on + strand, within CA264_09120 at 2136.141 kb on + strand, within CA264_09120 at 2136.141 kb on + strand, within CA264_09120 at 2136.141 kb on + strand, within CA264_09120 at 2136.142 kb on - strand, within CA264_09120 at 2136.234 kb on + strand, within CA264_09120 at 2136.285 kb on + strand, within CA264_09120 at 2136.291 kb on - strand, within CA264_09120 at 2136.354 kb on + strand, within CA264_09120 at 2136.354 kb on + strand, within CA264_09120 at 2136.354 kb on + strand, within CA264_09120 at 2136.354 kb on + strand, within CA264_09120 at 2136.355 kb on - strand, within CA264_09120 at 2136.355 kb on - strand, within CA264_09120 at 2136.355 kb on - strand, within CA264_09120 at 2136.355 kb on - strand, within CA264_09120 at 2136.356 kb on + strand, within CA264_09120 at 2136.357 kb on - strand, within CA264_09120 at 2136.357 kb on - strand, within CA264_09120 at 2136.403 kb on + strand, within CA264_09120 at 2136.477 kb on + strand, within CA264_09120 at 2136.486 kb on - strand, within CA264_09120
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.0025 mg/ml remove 2,133,942 + CA264_09110 0.64 -0.2 2,133,945 + CA264_09110 0.64 -2.8 2,133,946 - CA264_09110 0.64 -0.5 2,134,009 + CA264_09110 0.71 +0.7 2,134,010 - CA264_09110 0.71 -1.9 2,134,056 - CA264_09110 0.76 -0.1 2,134,092 - CA264_09110 0.80 -0.7 2,134,092 - CA264_09110 0.80 -0.1 2,134,220 + -2.2 2,134,221 - -0.2 2,134,290 - +0.5 2,134,368 - +0.1 2,134,368 - -0.9 2,134,368 - -1.1 2,134,368 - +0.3 2,134,368 - -0.9 2,134,376 + -1.1 2,134,386 + -0.4 2,134,387 - -1.6 2,134,391 - -0.4 2,134,391 - -2.3 2,134,391 - +1.5 2,134,391 - -0.7 2,134,391 - -1.0 2,134,395 + -2.7 2,134,395 + -1.6 2,134,396 - -0.7 2,134,419 + -1.4 2,134,420 - -0.7 2,134,537 - -1.1 2,134,580 + -2.0 2,134,581 - -0.9 2,134,589 + -1.9 2,134,727 + -0.6 2,134,815 + -2.6 2,134,843 + -3.3 2,134,863 - -2.4 2,134,871 + -1.5 2,134,872 - -0.8 2,134,896 + -3.9 2,134,896 + -1.9 2,134,897 - +1.3 2,134,905 + CA264_09115 0.11 -2.0 2,135,041 - CA264_09115 0.31 +0.9 2,135,194 + CA264_09115 0.54 -0.9 2,135,195 - CA264_09115 0.54 -2.0 2,135,195 - CA264_09115 0.54 -1.0 2,135,195 - CA264_09115 0.54 -0.9 2,135,253 + CA264_09115 0.62 -2.1 2,135,254 - CA264_09115 0.63 -1.4 2,135,313 + CA264_09115 0.71 -1.0 2,135,511 + -2.7 2,135,515 + -2.3 2,135,516 - -2.1 2,135,516 - -2.7 2,135,571 + -1.6 2,135,576 + -2.6 2,135,595 - -1.8 2,135,612 + -1.9 2,135,674 + -1.5 2,135,723 + -0.1 2,135,742 - CA264_09120 0.11 -0.2 2,135,805 + CA264_09120 0.16 -1.4 2,135,806 - CA264_09120 0.16 -2.6 2,135,844 - CA264_09120 0.19 -0.7 2,135,844 - CA264_09120 0.19 -0.1 2,135,850 + CA264_09120 0.20 -0.6 2,135,937 + CA264_09120 0.27 +0.7 2,136,029 + CA264_09120 0.35 -1.9 2,136,030 - CA264_09120 0.35 +0.6 2,136,030 - CA264_09120 0.35 +0.0 2,136,030 - CA264_09120 0.35 +0.4 2,136,030 - CA264_09120 0.35 -1.8 2,136,030 - CA264_09120 0.35 +1.0 2,136,071 + CA264_09120 0.39 -1.5 2,136,141 + CA264_09120 0.45 -1.5 2,136,141 + CA264_09120 0.45 -0.4 2,136,141 + CA264_09120 0.45 -1.6 2,136,142 - CA264_09120 0.45 +0.4 2,136,234 + CA264_09120 0.52 -1.6 2,136,285 + CA264_09120 0.57 -1.1 2,136,291 - CA264_09120 0.57 -0.1 2,136,354 + CA264_09120 0.63 -1.3 2,136,354 + CA264_09120 0.63 -0.0 2,136,354 + CA264_09120 0.63 +1.3 2,136,354 + CA264_09120 0.63 -1.2 2,136,355 - CA264_09120 0.63 -0.8 2,136,355 - CA264_09120 0.63 -0.1 2,136,355 - CA264_09120 0.63 -0.1 2,136,355 - CA264_09120 0.63 -0.2 2,136,356 + CA264_09120 0.63 -2.3 2,136,357 - CA264_09120 0.63 -1.6 2,136,357 - CA264_09120 0.63 +0.1 2,136,403 + CA264_09120 0.67 +0.1 2,136,477 + CA264_09120 0.73 +0.9 2,136,486 - CA264_09120 0.74 +0.2
Or see this region's nucleotide sequence