Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_08800

Experiment: m.b. Thallium(I) acetate 0.0025 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_08795 and CA264_08800 overlap by 4 nucleotidesCA264_08800 and CA264_08805 are separated by 8 nucleotidesCA264_08805 and CA264_08810 are separated by 353 nucleotides CA264_08795: CA264_08795 - KipI antagonist, at 2,053,388 to 2,054,401 _08795 CA264_08800: CA264_08800 - kinase inhibitor, at 2,054,398 to 2,055,126 _08800 CA264_08805: CA264_08805 - inosine/xanthosine triphosphatase, at 2,055,135 to 2,055,701 _08805 CA264_08810: CA264_08810 - aminopeptidase, at 2,056,055 to 2,058,658 _08810 Position (kb) 2054 2055 2056Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 2053.401 kb on - strandat 2053.401 kb on - strandat 2053.453 kb on - strandat 2053.457 kb on + strandat 2053.458 kb on - strandat 2053.458 kb on - strandat 2053.458 kb on - strandat 2053.595 kb on - strand, within CA264_08795at 2053.638 kb on + strand, within CA264_08795at 2053.639 kb on - strand, within CA264_08795at 2053.639 kb on - strand, within CA264_08795at 2053.685 kb on + strand, within CA264_08795at 2053.687 kb on + strand, within CA264_08795at 2053.687 kb on + strand, within CA264_08795at 2053.687 kb on + strand, within CA264_08795at 2053.687 kb on + strand, within CA264_08795at 2053.687 kb on + strand, within CA264_08795at 2053.688 kb on - strand, within CA264_08795at 2053.688 kb on - strand, within CA264_08795at 2053.688 kb on - strand, within CA264_08795at 2053.691 kb on - strand, within CA264_08795at 2053.730 kb on + strand, within CA264_08795at 2053.731 kb on - strand, within CA264_08795at 2053.753 kb on + strand, within CA264_08795at 2053.753 kb on + strand, within CA264_08795at 2053.753 kb on + strand, within CA264_08795at 2053.754 kb on - strand, within CA264_08795at 2053.755 kb on + strand, within CA264_08795at 2053.775 kb on - strand, within CA264_08795at 2053.775 kb on - strand, within CA264_08795at 2053.786 kb on - strand, within CA264_08795at 2053.828 kb on - strand, within CA264_08795at 2053.911 kb on - strand, within CA264_08795at 2054.008 kb on - strand, within CA264_08795at 2054.011 kb on + strand, within CA264_08795at 2054.012 kb on - strand, within CA264_08795at 2054.065 kb on - strand, within CA264_08795at 2054.070 kb on + strand, within CA264_08795at 2054.071 kb on - strand, within CA264_08795at 2054.071 kb on - strand, within CA264_08795at 2054.385 kb on - strandat 2054.474 kb on - strand, within CA264_08800at 2054.605 kb on + strand, within CA264_08800at 2054.607 kb on + strand, within CA264_08800at 2054.608 kb on - strand, within CA264_08800at 2054.608 kb on - strand, within CA264_08800at 2054.705 kb on + strand, within CA264_08800at 2054.705 kb on + strand, within CA264_08800at 2054.754 kb on + strand, within CA264_08800at 2054.798 kb on + strand, within CA264_08800at 2054.798 kb on + strand, within CA264_08800at 2054.799 kb on - strand, within CA264_08800at 2054.891 kb on + strand, within CA264_08800at 2054.934 kb on - strand, within CA264_08800at 2054.934 kb on - strand, within CA264_08800at 2054.966 kb on + strand, within CA264_08800at 2054.967 kb on - strand, within CA264_08800at 2054.967 kb on - strand, within CA264_08800at 2054.967 kb on - strand, within CA264_08800at 2055.028 kb on + strand, within CA264_08800at 2055.029 kb on - strand, within CA264_08800at 2055.039 kb on + strand, within CA264_08800at 2055.039 kb on + strand, within CA264_08800at 2055.040 kb on - strand, within CA264_08800at 2055.043 kb on + strand, within CA264_08800at 2055.043 kb on + strand, within CA264_08800at 2055.092 kb on - strandat 2055.126 kb on + strandat 2055.126 kb on + strandat 2055.130 kb on + strandat 2055.130 kb on + strandat 2055.130 kb on + strandat 2055.130 kb on - strandat 2055.465 kb on + strand, within CA264_08805at 2055.465 kb on + strand, within CA264_08805at 2055.466 kb on - strand, within CA264_08805at 2055.466 kb on - strand, within CA264_08805at 2055.553 kb on - strand, within CA264_08805at 2055.649 kb on - strandat 2055.689 kb on + strandat 2055.690 kb on - strandat 2055.720 kb on + strandat 2055.728 kb on - strandat 2055.759 kb on + strandat 2055.759 kb on + strandat 2055.760 kb on - strandat 2055.760 kb on - strandat 2055.768 kb on + strandat 2055.864 kb on + strandat 2055.864 kb on + strandat 2055.865 kb on - strandat 2055.883 kb on + strandat 2055.884 kb on - strandat 2055.887 kb on + strandat 2055.887 kb on + strandat 2055.887 kb on + strandat 2055.888 kb on - strandat 2055.890 kb on - strandat 2055.908 kb on - strandat 2055.972 kb on + strandat 2056.037 kb on + strandat 2056.037 kb on + strandat 2056.044 kb on - strandat 2056.077 kb on + strandat 2056.078 kb on - strandat 2056.078 kb on - strandat 2056.078 kb on - strandat 2056.081 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.0025 mg/ml
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2,053,401 - -0.5
2,053,401 - +0.5
2,053,453 - -1.3
2,053,457 + +0.5
2,053,458 - -0.1
2,053,458 - -0.3
2,053,458 - +0.2
2,053,595 - CA264_08795 0.20 +1.7
2,053,638 + CA264_08795 0.25 +2.1
2,053,639 - CA264_08795 0.25 -0.4
2,053,639 - CA264_08795 0.25 -0.7
2,053,685 + CA264_08795 0.29 -1.2
2,053,687 + CA264_08795 0.29 +0.1
2,053,687 + CA264_08795 0.29 +0.8
2,053,687 + CA264_08795 0.29 +2.2
2,053,687 + CA264_08795 0.29 -0.4
2,053,687 + CA264_08795 0.29 +0.3
2,053,688 - CA264_08795 0.30 -0.7
2,053,688 - CA264_08795 0.30 +0.2
2,053,688 - CA264_08795 0.30 -0.3
2,053,691 - CA264_08795 0.30 +1.2
2,053,730 + CA264_08795 0.34 -0.6
2,053,731 - CA264_08795 0.34 +2.0
2,053,753 + CA264_08795 0.36 +0.1
2,053,753 + CA264_08795 0.36 +0.5
2,053,753 + CA264_08795 0.36 +0.1
2,053,754 - CA264_08795 0.36 -0.6
2,053,755 + CA264_08795 0.36 -1.6
2,053,775 - CA264_08795 0.38 -0.8
2,053,775 - CA264_08795 0.38 -0.5
2,053,786 - CA264_08795 0.39 +0.7
2,053,828 - CA264_08795 0.43 +0.3
2,053,911 - CA264_08795 0.52 +0.1
2,054,008 - CA264_08795 0.61 -0.7
2,054,011 + CA264_08795 0.61 +0.1
2,054,012 - CA264_08795 0.62 -1.4
2,054,065 - CA264_08795 0.67 -0.3
2,054,070 + CA264_08795 0.67 +1.5
2,054,071 - CA264_08795 0.67 -1.1
2,054,071 - CA264_08795 0.67 -1.1
2,054,385 - -0.3
2,054,474 - CA264_08800 0.10 +0.6
2,054,605 + CA264_08800 0.28 -2.0
2,054,607 + CA264_08800 0.29 +0.1
2,054,608 - CA264_08800 0.29 -1.8
2,054,608 - CA264_08800 0.29 +0.1
2,054,705 + CA264_08800 0.42 -0.1
2,054,705 + CA264_08800 0.42 +1.1
2,054,754 + CA264_08800 0.49 +0.4
2,054,798 + CA264_08800 0.55 +0.0
2,054,798 + CA264_08800 0.55 -1.4
2,054,799 - CA264_08800 0.55 -0.8
2,054,891 + CA264_08800 0.68 +1.2
2,054,934 - CA264_08800 0.74 -1.1
2,054,934 - CA264_08800 0.74 -1.4
2,054,966 + CA264_08800 0.78 +1.9
2,054,967 - CA264_08800 0.78 -0.9
2,054,967 - CA264_08800 0.78 -0.1
2,054,967 - CA264_08800 0.78 +1.5
2,055,028 + CA264_08800 0.86 -0.0
2,055,029 - CA264_08800 0.87 -1.0
2,055,039 + CA264_08800 0.88 -0.1
2,055,039 + CA264_08800 0.88 -0.5
2,055,040 - CA264_08800 0.88 -0.9
2,055,043 + CA264_08800 0.88 +1.2
2,055,043 + CA264_08800 0.88 +0.7
2,055,092 - -0.5
2,055,126 + -0.7
2,055,126 + +0.1
2,055,130 + -3.1
2,055,130 + -1.3
2,055,130 + -1.1
2,055,130 - -1.0
2,055,465 + CA264_08805 0.58 -0.1
2,055,465 + CA264_08805 0.58 -0.1
2,055,466 - CA264_08805 0.58 +1.2
2,055,466 - CA264_08805 0.58 -0.9
2,055,553 - CA264_08805 0.74 -1.9
2,055,649 - -2.6
2,055,689 + +0.6
2,055,690 - -1.3
2,055,720 + +0.4
2,055,728 - -2.1
2,055,759 + -0.9
2,055,759 + -0.7
2,055,760 - -1.5
2,055,760 - -1.4
2,055,768 + +0.2
2,055,864 + -0.0
2,055,864 + +0.1
2,055,865 - -1.4
2,055,883 + +0.7
2,055,884 - -2.0
2,055,887 + -0.7
2,055,887 + -1.9
2,055,887 + -2.5
2,055,888 - -0.5
2,055,890 - -0.2
2,055,908 - -0.1
2,055,972 + -1.3
2,056,037 + -0.8
2,056,037 + -0.9
2,056,044 - -1.2
2,056,077 + +0.9
2,056,078 - -1.1
2,056,078 - -2.6
2,056,078 - -1.7
2,056,081 - -1.7

Or see this region's nucleotide sequence