Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_07440

Experiment: m.b. Thallium(I) acetate 0.0025 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_07435 and CA264_07440 are separated by 381 nucleotidesCA264_07440 and CA264_07445 are separated by 50 nucleotides CA264_07435: CA264_07435 - transporter permease, at 1,715,599 to 1,717,959 _07435 CA264_07440: CA264_07440 - class II fructose-bisphosphate aldolase, at 1,718,341 to 1,719,417 _07440 CA264_07445: CA264_07445 - phosphofructokinase, at 1,719,468 to 1,720,421 _07445 Position (kb) 1718 1719 1720Strain fitness (log2 ratio) -2 -1 0 1 2at 1717.341 kb on + strand, within CA264_07435at 1717.414 kb on - strand, within CA264_07435at 1717.417 kb on - strand, within CA264_07435at 1717.453 kb on + strand, within CA264_07435at 1717.454 kb on - strand, within CA264_07435at 1717.485 kb on + strand, within CA264_07435at 1717.564 kb on + strand, within CA264_07435at 1717.565 kb on - strand, within CA264_07435at 1717.570 kb on - strand, within CA264_07435at 1717.590 kb on - strand, within CA264_07435at 1717.647 kb on + strand, within CA264_07435at 1717.681 kb on - strand, within CA264_07435at 1717.681 kb on - strand, within CA264_07435at 1717.683 kb on - strand, within CA264_07435at 1717.761 kb on + strandat 1717.764 kb on + strandat 1717.764 kb on + strandat 1717.765 kb on - strandat 1717.765 kb on - strandat 1717.789 kb on + strandat 1717.798 kb on - strandat 1717.816 kb on - strandat 1717.824 kb on + strandat 1717.824 kb on + strandat 1717.824 kb on + strandat 1717.846 kb on - strandat 1717.867 kb on + strandat 1717.867 kb on + strandat 1717.867 kb on + strandat 1717.868 kb on - strandat 1717.868 kb on - strandat 1717.868 kb on - strandat 1717.912 kb on - strandat 1717.929 kb on + strandat 1717.931 kb on + strandat 1717.931 kb on + strandat 1717.932 kb on - strandat 1717.935 kb on + strandat 1717.935 kb on + strandat 1717.936 kb on - strandat 1717.960 kb on - strandat 1717.980 kb on + strandat 1717.981 kb on - strandat 1718.008 kb on + strandat 1718.017 kb on - strandat 1718.020 kb on + strandat 1718.021 kb on - strandat 1718.021 kb on - strandat 1718.021 kb on - strandat 1718.021 kb on - strandat 1718.022 kb on + strandat 1718.023 kb on - strandat 1718.023 kb on - strandat 1718.027 kb on + strandat 1718.028 kb on - strandat 1718.107 kb on - strandat 1718.112 kb on - strandat 1718.179 kb on + strandat 1718.180 kb on - strandat 1718.204 kb on + strandat 1718.220 kb on - strandat 1718.254 kb on + strandat 1718.254 kb on + strandat 1718.254 kb on + strandat 1718.254 kb on + strandat 1718.254 kb on + strandat 1718.255 kb on - strandat 1719.416 kb on - strandat 1719.470 kb on - strandat 1719.477 kb on + strandat 1719.478 kb on + strandat 1719.478 kb on - strandat 1719.502 kb on + strandat 1719.503 kb on - strandat 1719.505 kb on - strandat 1719.641 kb on + strand, within CA264_07445at 1719.690 kb on + strand, within CA264_07445at 1719.690 kb on + strand, within CA264_07445at 1719.691 kb on - strand, within CA264_07445at 1719.691 kb on - strand, within CA264_07445at 1719.694 kb on + strand, within CA264_07445at 1719.694 kb on + strand, within CA264_07445at 1719.695 kb on - strand, within CA264_07445at 1719.695 kb on - strand, within CA264_07445at 1719.872 kb on - strand, within CA264_07445at 1719.872 kb on - strand, within CA264_07445at 1719.992 kb on + strand, within CA264_07445at 1720.015 kb on + strand, within CA264_07445at 1720.016 kb on - strand, within CA264_07445at 1720.016 kb on - strand, within CA264_07445at 1720.085 kb on + strand, within CA264_07445at 1720.184 kb on - strand, within CA264_07445at 1720.188 kb on + strand, within CA264_07445at 1720.189 kb on - strand, within CA264_07445at 1720.296 kb on + strand, within CA264_07445at 1720.296 kb on + strand, within CA264_07445at 1720.379 kb on + strandat 1720.411 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.0025 mg/ml
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1,717,341 + CA264_07435 0.74 -2.4
1,717,414 - CA264_07435 0.77 +2.2
1,717,417 - CA264_07435 0.77 +0.2
1,717,453 + CA264_07435 0.79 +0.2
1,717,454 - CA264_07435 0.79 +0.7
1,717,485 + CA264_07435 0.80 -0.7
1,717,564 + CA264_07435 0.83 -0.5
1,717,565 - CA264_07435 0.83 -1.1
1,717,570 - CA264_07435 0.83 -0.8
1,717,590 - CA264_07435 0.84 +0.6
1,717,647 + CA264_07435 0.87 -2.2
1,717,681 - CA264_07435 0.88 -1.6
1,717,681 - CA264_07435 0.88 +0.1
1,717,683 - CA264_07435 0.88 +1.2
1,717,761 + -0.3
1,717,764 + -1.2
1,717,764 + +0.1
1,717,765 - -0.5
1,717,765 - -0.5
1,717,789 + -1.8
1,717,798 - -0.4
1,717,816 - +0.3
1,717,824 + -1.4
1,717,824 + -0.9
1,717,824 + -1.1
1,717,846 - -0.4
1,717,867 + +0.7
1,717,867 + -1.0
1,717,867 + -0.8
1,717,868 - +0.2
1,717,868 - +0.9
1,717,868 - +0.8
1,717,912 - -0.4
1,717,929 + -0.6
1,717,931 + +1.8
1,717,931 + -0.8
1,717,932 - -0.3
1,717,935 + -2.0
1,717,935 + -0.2
1,717,936 - +2.0
1,717,960 - +0.9
1,717,980 + -0.3
1,717,981 - -0.0
1,718,008 + -1.8
1,718,017 - +0.1
1,718,020 + -0.8
1,718,021 - +0.1
1,718,021 - +1.2
1,718,021 - +0.3
1,718,021 - -0.2
1,718,022 + -0.4
1,718,023 - -0.2
1,718,023 - +0.1
1,718,027 + -1.5
1,718,028 - -0.4
1,718,107 - +1.3
1,718,112 - +0.3
1,718,179 + -1.6
1,718,180 - +0.4
1,718,204 + -1.0
1,718,220 - +0.1
1,718,254 + -1.5
1,718,254 + -0.9
1,718,254 + -1.7
1,718,254 + +0.8
1,718,254 + -0.9
1,718,255 - +1.4
1,719,416 - -1.4
1,719,470 - -0.9
1,719,477 + +1.1
1,719,478 + +0.3
1,719,478 - -2.0
1,719,502 + +0.5
1,719,503 - -1.1
1,719,505 - -0.2
1,719,641 + CA264_07445 0.18 -0.9
1,719,690 + CA264_07445 0.23 +0.7
1,719,690 + CA264_07445 0.23 +0.7
1,719,691 - CA264_07445 0.23 -2.5
1,719,691 - CA264_07445 0.23 -1.3
1,719,694 + CA264_07445 0.24 +0.7
1,719,694 + CA264_07445 0.24 +0.3
1,719,695 - CA264_07445 0.24 -0.9
1,719,695 - CA264_07445 0.24 -0.6
1,719,872 - CA264_07445 0.42 -1.0
1,719,872 - CA264_07445 0.42 +0.0
1,719,992 + CA264_07445 0.55 -1.0
1,720,015 + CA264_07445 0.57 +0.7
1,720,016 - CA264_07445 0.57 -0.2
1,720,016 - CA264_07445 0.57 -1.4
1,720,085 + CA264_07445 0.65 +0.3
1,720,184 - CA264_07445 0.75 -0.3
1,720,188 + CA264_07445 0.75 +0.8
1,720,189 - CA264_07445 0.76 -1.3
1,720,296 + CA264_07445 0.87 +0.0
1,720,296 + CA264_07445 0.87 -1.4
1,720,379 + +0.2
1,720,411 - -1.0

Or see this region's nucleotide sequence