Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_07100

Experiment: m.b. Thallium(I) acetate 0.0025 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_07095 and CA264_07100 are separated by 84 nucleotidesCA264_07100 and CA264_07105 are separated by 928 nucleotides CA264_07095: CA264_07095 - hypothetical protein, at 1,634,259 to 1,635,521 _07095 CA264_07100: CA264_07100 - PrkA family serine protein kinase, at 1,635,606 to 1,637,534 _07100 CA264_07105: CA264_07105 - phosphohydrolase, at 1,638,463 to 1,639,722 _07105 Position (kb) 1635 1636 1637 1638Strain fitness (log2 ratio) -4 -3 -2 -1 0 1at 1634.664 kb on - strand, within CA264_07095at 1634.707 kb on + strand, within CA264_07095at 1634.707 kb on + strand, within CA264_07095at 1634.707 kb on + strand, within CA264_07095at 1634.708 kb on - strand, within CA264_07095at 1634.787 kb on + strand, within CA264_07095at 1634.830 kb on + strand, within CA264_07095at 1634.831 kb on - strand, within CA264_07095at 1634.831 kb on - strand, within CA264_07095at 1634.865 kb on - strand, within CA264_07095at 1635.023 kb on + strand, within CA264_07095at 1635.023 kb on + strand, within CA264_07095at 1635.056 kb on + strand, within CA264_07095at 1635.057 kb on - strand, within CA264_07095at 1635.251 kb on + strand, within CA264_07095at 1635.252 kb on - strand, within CA264_07095at 1635.255 kb on + strand, within CA264_07095at 1635.300 kb on - strand, within CA264_07095at 1635.300 kb on - strand, within CA264_07095at 1635.301 kb on + strand, within CA264_07095at 1635.301 kb on + strand, within CA264_07095at 1635.301 kb on + strand, within CA264_07095at 1635.302 kb on - strand, within CA264_07095at 1635.395 kb on + strandat 1635.410 kb on + strandat 1635.411 kb on - strandat 1635.548 kb on + strandat 1635.556 kb on - strandat 1635.556 kb on - strandat 1635.562 kb on + strandat 1635.585 kb on - strandat 1635.599 kb on - strandat 1635.608 kb on - strandat 1635.608 kb on - strandat 1635.633 kb on - strandat 1635.668 kb on + strandat 1635.856 kb on + strand, within CA264_07100at 1636.018 kb on + strand, within CA264_07100at 1636.019 kb on - strand, within CA264_07100at 1636.027 kb on + strand, within CA264_07100at 1636.028 kb on - strand, within CA264_07100at 1636.051 kb on + strand, within CA264_07100at 1636.052 kb on - strand, within CA264_07100at 1636.061 kb on - strand, within CA264_07100at 1636.084 kb on - strand, within CA264_07100at 1636.109 kb on - strand, within CA264_07100at 1636.109 kb on - strand, within CA264_07100at 1636.112 kb on + strand, within CA264_07100at 1636.144 kb on + strand, within CA264_07100at 1636.201 kb on + strand, within CA264_07100at 1636.202 kb on - strand, within CA264_07100at 1636.202 kb on - strand, within CA264_07100at 1636.202 kb on - strand, within CA264_07100at 1636.228 kb on - strand, within CA264_07100at 1636.307 kb on + strand, within CA264_07100at 1636.381 kb on + strand, within CA264_07100at 1636.399 kb on + strand, within CA264_07100at 1636.508 kb on + strand, within CA264_07100at 1636.508 kb on + strand, within CA264_07100at 1636.520 kb on - strand, within CA264_07100at 1636.553 kb on - strand, within CA264_07100at 1636.563 kb on + strand, within CA264_07100at 1636.564 kb on - strand, within CA264_07100at 1636.570 kb on + strand, within CA264_07100at 1636.574 kb on + strand, within CA264_07100at 1636.575 kb on - strand, within CA264_07100at 1636.693 kb on + strand, within CA264_07100at 1636.693 kb on + strand, within CA264_07100at 1636.804 kb on + strand, within CA264_07100at 1636.804 kb on + strand, within CA264_07100at 1636.804 kb on + strand, within CA264_07100at 1636.805 kb on - strand, within CA264_07100at 1636.935 kb on + strand, within CA264_07100at 1637.033 kb on - strand, within CA264_07100at 1637.033 kb on - strand, within CA264_07100at 1637.044 kb on - strand, within CA264_07100at 1637.051 kb on - strand, within CA264_07100at 1637.075 kb on - strand, within CA264_07100at 1637.140 kb on + strand, within CA264_07100at 1637.141 kb on - strand, within CA264_07100at 1637.267 kb on - strand, within CA264_07100at 1637.302 kb on + strand, within CA264_07100at 1637.331 kb on + strand, within CA264_07100at 1637.332 kb on - strand, within CA264_07100at 1637.453 kb on + strandat 1637.476 kb on - strandat 1637.535 kb on - strandat 1637.535 kb on - strandat 1637.550 kb on + strandat 1637.551 kb on - strandat 1637.552 kb on + strandat 1637.553 kb on - strandat 1637.597 kb on - strandat 1637.629 kb on + strandat 1637.630 kb on - strandat 1637.637 kb on + strandat 1637.638 kb on - strandat 1637.638 kb on - strandat 1637.638 kb on - strandat 1637.643 kb on + strandat 1637.648 kb on + strandat 1637.648 kb on + strandat 1637.649 kb on - strandat 1637.650 kb on + strandat 1637.651 kb on - strandat 1637.651 kb on - strandat 1637.651 kb on - strandat 1637.662 kb on + strandat 1637.662 kb on + strandat 1637.662 kb on + strandat 1637.662 kb on + strandat 1637.663 kb on - strandat 1637.668 kb on - strandat 1637.747 kb on + strandat 1637.748 kb on - strandat 1637.748 kb on - strandat 1637.752 kb on - strandat 1637.768 kb on + strandat 1637.769 kb on - strandat 1637.769 kb on - strandat 1637.786 kb on + strandat 1637.786 kb on + strandat 1637.787 kb on - strandat 1637.787 kb on - strandat 1637.798 kb on + strandat 1637.799 kb on - strandat 1637.799 kb on - strandat 1637.901 kb on + strandat 1637.902 kb on - strandat 1637.902 kb on - strandat 1638.071 kb on + strandat 1638.142 kb on + strandat 1638.158 kb on + strandat 1638.163 kb on - strandat 1638.163 kb on - strandat 1638.200 kb on - strandat 1638.215 kb on - strandat 1638.219 kb on + strandat 1638.219 kb on + strandat 1638.297 kb on - strandat 1638.297 kb on - strandat 1638.321 kb on - strandat 1638.321 kb on - strandat 1638.374 kb on + strandat 1638.374 kb on + strandat 1638.375 kb on - strandat 1638.436 kb on + strandat 1638.436 kb on + strandat 1638.500 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.0025 mg/ml
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1,634,664 - CA264_07095 0.32 -0.7
1,634,707 + CA264_07095 0.35 +0.6
1,634,707 + CA264_07095 0.35 +0.1
1,634,707 + CA264_07095 0.35 +0.6
1,634,708 - CA264_07095 0.36 -0.3
1,634,787 + CA264_07095 0.42 -0.4
1,634,830 + CA264_07095 0.45 -0.1
1,634,831 - CA264_07095 0.45 -0.0
1,634,831 - CA264_07095 0.45 -1.2
1,634,865 - CA264_07095 0.48 +0.8
1,635,023 + CA264_07095 0.60 -0.1
1,635,023 + CA264_07095 0.60 +0.6
1,635,056 + CA264_07095 0.63 -0.7
1,635,057 - CA264_07095 0.63 -0.2
1,635,251 + CA264_07095 0.79 -2.2
1,635,252 - CA264_07095 0.79 -0.8
1,635,255 + CA264_07095 0.79 +0.8
1,635,300 - CA264_07095 0.82 -0.6
1,635,300 - CA264_07095 0.82 -1.5
1,635,301 + CA264_07095 0.83 -2.9
1,635,301 + CA264_07095 0.83 -0.5
1,635,301 + CA264_07095 0.83 -2.9
1,635,302 - CA264_07095 0.83 +0.8
1,635,395 + -0.2
1,635,410 + -1.9
1,635,411 - -0.1
1,635,548 + +0.3
1,635,556 - +0.6
1,635,556 - +0.3
1,635,562 + -0.6
1,635,585 - -0.9
1,635,599 - -1.2
1,635,608 - -1.7
1,635,608 - -0.8
1,635,633 - +0.3
1,635,668 + +1.3
1,635,856 + CA264_07100 0.13 +1.0
1,636,018 + CA264_07100 0.21 +1.7
1,636,019 - CA264_07100 0.21 -0.1
1,636,027 + CA264_07100 0.22 -0.0
1,636,028 - CA264_07100 0.22 -0.7
1,636,051 + CA264_07100 0.23 +0.3
1,636,052 - CA264_07100 0.23 +1.0
1,636,061 - CA264_07100 0.24 +0.2
1,636,084 - CA264_07100 0.25 -1.3
1,636,109 - CA264_07100 0.26 +0.5
1,636,109 - CA264_07100 0.26 +0.1
1,636,112 + CA264_07100 0.26 -1.3
1,636,144 + CA264_07100 0.28 -0.0
1,636,201 + CA264_07100 0.31 -1.3
1,636,202 - CA264_07100 0.31 -0.7
1,636,202 - CA264_07100 0.31 -0.1
1,636,202 - CA264_07100 0.31 +0.3
1,636,228 - CA264_07100 0.32 -0.3
1,636,307 + CA264_07100 0.36 -0.8
1,636,381 + CA264_07100 0.40 -0.3
1,636,399 + CA264_07100 0.41 +0.6
1,636,508 + CA264_07100 0.47 +1.5
1,636,508 + CA264_07100 0.47 -1.0
1,636,520 - CA264_07100 0.47 +1.0
1,636,553 - CA264_07100 0.49 -1.9
1,636,563 + CA264_07100 0.50 +0.5
1,636,564 - CA264_07100 0.50 -0.7
1,636,570 + CA264_07100 0.50 -0.2
1,636,574 + CA264_07100 0.50 +0.1
1,636,575 - CA264_07100 0.50 -0.3
1,636,693 + CA264_07100 0.56 +0.9
1,636,693 + CA264_07100 0.56 +1.0
1,636,804 + CA264_07100 0.62 -0.9
1,636,804 + CA264_07100 0.62 -0.7
1,636,804 + CA264_07100 0.62 -0.1
1,636,805 - CA264_07100 0.62 +0.7
1,636,935 + CA264_07100 0.69 -1.4
1,637,033 - CA264_07100 0.74 -0.2
1,637,033 - CA264_07100 0.74 -0.5
1,637,044 - CA264_07100 0.75 -0.6
1,637,051 - CA264_07100 0.75 -0.7
1,637,075 - CA264_07100 0.76 -0.4
1,637,140 + CA264_07100 0.80 -0.2
1,637,141 - CA264_07100 0.80 -1.0
1,637,267 - CA264_07100 0.86 +0.6
1,637,302 + CA264_07100 0.88 -0.5
1,637,331 + CA264_07100 0.89 -0.7
1,637,332 - CA264_07100 0.89 -1.2
1,637,453 + +1.7
1,637,476 - -0.2
1,637,535 - +1.1
1,637,535 - +0.1
1,637,550 + +0.6
1,637,551 - -1.6
1,637,552 + -1.2
1,637,553 - -1.3
1,637,597 - -0.4
1,637,629 + -1.0
1,637,630 - -0.7
1,637,637 + +0.5
1,637,638 - -1.2
1,637,638 - -0.7
1,637,638 - -0.7
1,637,643 + -0.5
1,637,648 + -0.4
1,637,648 + -1.4
1,637,649 - -1.1
1,637,650 + -2.8
1,637,651 - -0.2
1,637,651 - -1.2
1,637,651 - -1.4
1,637,662 + -0.4
1,637,662 + -0.4
1,637,662 + -1.2
1,637,662 + -0.6
1,637,663 - -0.1
1,637,668 - -3.9
1,637,747 + -0.3
1,637,748 - +0.0
1,637,748 - -1.7
1,637,752 - -0.8
1,637,768 + +0.9
1,637,769 - -0.4
1,637,769 - -0.7
1,637,786 + +1.7
1,637,786 + -0.4
1,637,787 - -0.9
1,637,787 - -0.6
1,637,798 + -0.2
1,637,799 - -0.3
1,637,799 - -2.1
1,637,901 + -0.6
1,637,902 - -1.0
1,637,902 - -1.2
1,638,071 + -0.5
1,638,142 + +0.4
1,638,158 + +0.1
1,638,163 - -0.6
1,638,163 - +0.2
1,638,200 - -1.8
1,638,215 - -0.5
1,638,219 + -0.1
1,638,219 + -0.1
1,638,297 - +0.7
1,638,297 - -0.5
1,638,321 - +0.9
1,638,321 - -0.4
1,638,374 + +0.1
1,638,374 + -1.6
1,638,375 - +0.3
1,638,436 + +0.1
1,638,436 + -0.2
1,638,500 - -0.7

Or see this region's nucleotide sequence