Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_07035

Experiment: m.b. Thallium(I) acetate 0.0025 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_07030 and CA264_07035 overlap by 4 nucleotidesCA264_07035 and CA264_07040 overlap by 23 nucleotides CA264_07030: CA264_07030 - UDP-glucose 4-epimerase, at 1,620,733 to 1,621,725 _07030 CA264_07035: CA264_07035 - hypothetical protein, at 1,621,722 to 1,622,843 _07035 CA264_07040: CA264_07040 - 8-amino-7-oxononanoate synthase, at 1,622,821 to 1,624,062 _07040 Position (kb) 1621 1622 1623Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 1620.724 kb on - strandat 1620.745 kb on - strandat 1620.763 kb on + strandat 1620.986 kb on - strand, within CA264_07030at 1621.025 kb on + strand, within CA264_07030at 1621.049 kb on + strand, within CA264_07030at 1621.050 kb on - strand, within CA264_07030at 1621.050 kb on - strand, within CA264_07030at 1621.050 kb on - strand, within CA264_07030at 1621.113 kb on - strand, within CA264_07030at 1621.149 kb on - strand, within CA264_07030at 1621.149 kb on - strand, within CA264_07030at 1621.149 kb on - strand, within CA264_07030at 1621.186 kb on - strand, within CA264_07030at 1621.211 kb on + strand, within CA264_07030at 1621.265 kb on + strand, within CA264_07030at 1621.266 kb on - strand, within CA264_07030at 1621.296 kb on - strand, within CA264_07030at 1621.331 kb on - strand, within CA264_07030at 1621.332 kb on + strand, within CA264_07030at 1621.406 kb on - strand, within CA264_07030at 1621.514 kb on + strand, within CA264_07030at 1621.520 kb on + strand, within CA264_07030at 1621.543 kb on + strand, within CA264_07030at 1621.579 kb on - strand, within CA264_07030at 1621.580 kb on + strand, within CA264_07030at 1621.581 kb on - strand, within CA264_07030at 1621.581 kb on - strand, within CA264_07030at 1621.585 kb on + strand, within CA264_07030at 1621.586 kb on - strand, within CA264_07030at 1621.637 kb on + strandat 1621.639 kb on + strandat 1621.639 kb on + strandat 1621.640 kb on - strandat 1621.648 kb on - strandat 1621.726 kb on - strandat 1621.748 kb on - strandat 1621.756 kb on + strandat 1621.756 kb on + strandat 1621.757 kb on - strandat 1621.873 kb on + strand, within CA264_07035at 1621.965 kb on + strand, within CA264_07035at 1621.966 kb on - strand, within CA264_07035at 1621.970 kb on + strand, within CA264_07035at 1621.970 kb on + strand, within CA264_07035at 1621.970 kb on + strand, within CA264_07035at 1621.971 kb on - strand, within CA264_07035at 1621.971 kb on - strand, within CA264_07035at 1622.026 kb on - strand, within CA264_07035at 1622.036 kb on + strand, within CA264_07035at 1622.077 kb on - strand, within CA264_07035at 1622.126 kb on - strand, within CA264_07035at 1622.186 kb on - strand, within CA264_07035at 1622.218 kb on + strand, within CA264_07035at 1622.218 kb on + strand, within CA264_07035at 1622.219 kb on - strand, within CA264_07035at 1622.219 kb on - strand, within CA264_07035at 1622.250 kb on - strand, within CA264_07035at 1622.277 kb on + strand, within CA264_07035at 1622.278 kb on - strand, within CA264_07035at 1622.308 kb on + strand, within CA264_07035at 1622.386 kb on + strand, within CA264_07035at 1622.387 kb on - strand, within CA264_07035at 1622.392 kb on + strand, within CA264_07035at 1622.398 kb on + strand, within CA264_07035at 1622.740 kb on + strandat 1622.741 kb on - strandat 1622.741 kb on - strandat 1622.755 kb on + strandat 1622.756 kb on - strandat 1622.756 kb on - strandat 1622.758 kb on + strandat 1622.774 kb on - strandat 1622.843 kb on + strandat 1622.843 kb on + strandat 1622.844 kb on - strandat 1622.844 kb on - strandat 1622.860 kb on - strandat 1622.860 kb on - strandat 1622.860 kb on - strandat 1622.877 kb on + strandat 1622.896 kb on - strandat 1622.951 kb on - strand, within CA264_07040at 1622.958 kb on + strand, within CA264_07040at 1623.060 kb on - strand, within CA264_07040at 1623.063 kb on + strand, within CA264_07040at 1623.064 kb on - strand, within CA264_07040at 1623.064 kb on - strand, within CA264_07040at 1623.064 kb on - strand, within CA264_07040at 1623.064 kb on - strand, within CA264_07040at 1623.067 kb on + strand, within CA264_07040at 1623.067 kb on + strand, within CA264_07040at 1623.068 kb on - strand, within CA264_07040at 1623.274 kb on - strand, within CA264_07040at 1623.327 kb on + strand, within CA264_07040at 1623.422 kb on - strand, within CA264_07040at 1623.422 kb on - strand, within CA264_07040at 1623.422 kb on - strand, within CA264_07040at 1623.422 kb on - strand, within CA264_07040at 1623.492 kb on + strand, within CA264_07040at 1623.571 kb on - strand, within CA264_07040at 1623.584 kb on + strand, within CA264_07040at 1623.584 kb on + strand, within CA264_07040at 1623.628 kb on - strand, within CA264_07040at 1623.657 kb on + strand, within CA264_07040at 1623.658 kb on - strand, within CA264_07040at 1623.659 kb on + strand, within CA264_07040at 1623.660 kb on - strand, within CA264_07040at 1623.687 kb on + strand, within CA264_07040

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.0025 mg/ml
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1,620,724 - -2.1
1,620,745 - -2.7
1,620,763 + -0.2
1,620,986 - CA264_07030 0.25 -3.7
1,621,025 + CA264_07030 0.29 -0.6
1,621,049 + CA264_07030 0.32 -1.7
1,621,050 - CA264_07030 0.32 -1.6
1,621,050 - CA264_07030 0.32 -2.7
1,621,050 - CA264_07030 0.32 -0.1
1,621,113 - CA264_07030 0.38 -2.6
1,621,149 - CA264_07030 0.42 -2.4
1,621,149 - CA264_07030 0.42 -1.9
1,621,149 - CA264_07030 0.42 -2.4
1,621,186 - CA264_07030 0.46 -3.0
1,621,211 + CA264_07030 0.48 -1.0
1,621,265 + CA264_07030 0.54 -1.2
1,621,266 - CA264_07030 0.54 -1.9
1,621,296 - CA264_07030 0.57 -2.0
1,621,331 - CA264_07030 0.60 -0.4
1,621,332 + CA264_07030 0.60 -2.7
1,621,406 - CA264_07030 0.68 -2.0
1,621,514 + CA264_07030 0.79 +0.7
1,621,520 + CA264_07030 0.79 -2.1
1,621,543 + CA264_07030 0.82 +0.2
1,621,579 - CA264_07030 0.85 +0.1
1,621,580 + CA264_07030 0.85 +0.2
1,621,581 - CA264_07030 0.85 -2.6
1,621,581 - CA264_07030 0.85 -1.1
1,621,585 + CA264_07030 0.86 -0.5
1,621,586 - CA264_07030 0.86 -3.2
1,621,637 + -0.4
1,621,639 + -1.9
1,621,639 + -1.1
1,621,640 - -0.6
1,621,648 - -2.5
1,621,726 - -1.6
1,621,748 - -3.1
1,621,756 + -2.0
1,621,756 + +1.4
1,621,757 - +1.5
1,621,873 + CA264_07035 0.13 +1.0
1,621,965 + CA264_07035 0.22 +0.2
1,621,966 - CA264_07035 0.22 -0.7
1,621,970 + CA264_07035 0.22 +0.9
1,621,970 + CA264_07035 0.22 +0.6
1,621,970 + CA264_07035 0.22 +0.8
1,621,971 - CA264_07035 0.22 -2.2
1,621,971 - CA264_07035 0.22 -1.3
1,622,026 - CA264_07035 0.27 -1.5
1,622,036 + CA264_07035 0.28 +1.8
1,622,077 - CA264_07035 0.32 -2.6
1,622,126 - CA264_07035 0.36 -1.5
1,622,186 - CA264_07035 0.41 -1.9
1,622,218 + CA264_07035 0.44 +1.3
1,622,218 + CA264_07035 0.44 +1.3
1,622,219 - CA264_07035 0.44 -1.9
1,622,219 - CA264_07035 0.44 -2.3
1,622,250 - CA264_07035 0.47 -1.2
1,622,277 + CA264_07035 0.49 -0.4
1,622,278 - CA264_07035 0.50 -2.9
1,622,308 + CA264_07035 0.52 +0.4
1,622,386 + CA264_07035 0.59 +1.2
1,622,387 - CA264_07035 0.59 +0.8
1,622,392 + CA264_07035 0.60 +1.7
1,622,398 + CA264_07035 0.60 +0.6
1,622,740 + +0.9
1,622,741 - -1.3
1,622,741 - -2.3
1,622,755 + +0.8
1,622,756 - -0.5
1,622,756 - -0.9
1,622,758 + +1.0
1,622,774 - -0.9
1,622,843 + +0.7
1,622,843 + -0.5
1,622,844 - -0.2
1,622,844 - +0.4
1,622,860 - -0.8
1,622,860 - -0.7
1,622,860 - -1.4
1,622,877 + -0.1
1,622,896 - -2.1
1,622,951 - CA264_07040 0.10 -2.5
1,622,958 + CA264_07040 0.11 +1.1
1,623,060 - CA264_07040 0.19 -1.9
1,623,063 + CA264_07040 0.19 -0.3
1,623,064 - CA264_07040 0.20 -2.3
1,623,064 - CA264_07040 0.20 -3.5
1,623,064 - CA264_07040 0.20 -0.2
1,623,064 - CA264_07040 0.20 -2.4
1,623,067 + CA264_07040 0.20 +0.1
1,623,067 + CA264_07040 0.20 +0.1
1,623,068 - CA264_07040 0.20 -2.4
1,623,274 - CA264_07040 0.36 -0.9
1,623,327 + CA264_07040 0.41 -1.8
1,623,422 - CA264_07040 0.48 -1.7
1,623,422 - CA264_07040 0.48 -0.2
1,623,422 - CA264_07040 0.48 -0.7
1,623,422 - CA264_07040 0.48 -1.2
1,623,492 + CA264_07040 0.54 +0.4
1,623,571 - CA264_07040 0.60 -1.3
1,623,584 + CA264_07040 0.61 +0.4
1,623,584 + CA264_07040 0.61 +0.1
1,623,628 - CA264_07040 0.65 -1.6
1,623,657 + CA264_07040 0.67 +0.1
1,623,658 - CA264_07040 0.67 -1.3
1,623,659 + CA264_07040 0.67 -1.2
1,623,660 - CA264_07040 0.68 -1.5
1,623,687 + CA264_07040 0.70 -0.7

Or see this region's nucleotide sequence