Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_06235

Experiment: m.b. Thallium(I) acetate 0.0025 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_06230 and CA264_06235 overlap by 1 nucleotidesCA264_06235 and CA264_06240 are separated by 99 nucleotides CA264_06230: CA264_06230 - acetylornithine deacetylase, at 1,449,983 to 1,451,059 _06230 CA264_06235: CA264_06235 - acetylglutamate kinase, at 1,451,059 to 1,451,847 _06235 CA264_06240: CA264_06240 - acetylornithine carbamoyltransferase, at 1,451,947 to 1,452,897 _06240 Position (kb) 1451 1452Strain fitness (log2 ratio) -2 -1 0 1at 1450.247 kb on + strand, within CA264_06230at 1450.297 kb on + strand, within CA264_06230at 1450.299 kb on + strand, within CA264_06230at 1450.299 kb on + strand, within CA264_06230at 1450.300 kb on - strand, within CA264_06230at 1450.431 kb on + strand, within CA264_06230at 1450.432 kb on - strand, within CA264_06230at 1450.451 kb on - strand, within CA264_06230at 1450.663 kb on + strand, within CA264_06230at 1450.684 kb on - strand, within CA264_06230at 1450.684 kb on - strand, within CA264_06230at 1450.684 kb on - strand, within CA264_06230at 1450.704 kb on + strand, within CA264_06230at 1450.705 kb on - strand, within CA264_06230at 1450.705 kb on - strand, within CA264_06230at 1450.705 kb on - strand, within CA264_06230at 1450.707 kb on + strand, within CA264_06230at 1450.708 kb on - strand, within CA264_06230at 1450.816 kb on - strand, within CA264_06230at 1450.988 kb on - strandat 1451.040 kb on + strandat 1451.061 kb on - strandat 1451.071 kb on + strandat 1451.227 kb on - strand, within CA264_06235at 1451.228 kb on + strand, within CA264_06235at 1451.228 kb on + strand, within CA264_06235at 1451.228 kb on + strand, within CA264_06235at 1451.228 kb on + strand, within CA264_06235at 1451.229 kb on - strand, within CA264_06235at 1451.229 kb on - strand, within CA264_06235at 1451.229 kb on - strand, within CA264_06235at 1451.229 kb on - strand, within CA264_06235at 1451.262 kb on + strand, within CA264_06235at 1451.605 kb on + strand, within CA264_06235at 1451.667 kb on + strand, within CA264_06235at 1451.667 kb on + strand, within CA264_06235at 1451.746 kb on + strand, within CA264_06235at 1451.836 kb on + strandat 1451.839 kb on + strandat 1451.841 kb on + strandat 1451.841 kb on + strandat 1451.842 kb on - strandat 1451.847 kb on + strandat 1451.914 kb on + strandat 1451.920 kb on + strandat 1451.920 kb on + strandat 1451.920 kb on + strandat 1451.920 kb on + strandat 1451.927 kb on - strandat 1451.927 kb on - strandat 1451.933 kb on + strandat 1452.014 kb on - strandat 1452.038 kb on - strandat 1452.107 kb on - strand, within CA264_06240at 1452.194 kb on + strand, within CA264_06240at 1452.276 kb on - strand, within CA264_06240at 1452.291 kb on + strand, within CA264_06240at 1452.429 kb on + strand, within CA264_06240at 1452.429 kb on + strand, within CA264_06240at 1452.429 kb on + strand, within CA264_06240at 1452.506 kb on - strand, within CA264_06240at 1452.507 kb on + strand, within CA264_06240at 1452.532 kb on - strand, within CA264_06240at 1452.621 kb on + strand, within CA264_06240at 1452.772 kb on + strand, within CA264_06240at 1452.772 kb on + strand, within CA264_06240at 1452.809 kb on + strandat 1452.809 kb on + strandat 1452.815 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.0025 mg/ml
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1,450,247 + CA264_06230 0.25 -1.0
1,450,297 + CA264_06230 0.29 -0.7
1,450,299 + CA264_06230 0.29 -0.1
1,450,299 + CA264_06230 0.29 +0.4
1,450,300 - CA264_06230 0.29 +1.1
1,450,431 + CA264_06230 0.42 +0.2
1,450,432 - CA264_06230 0.42 -1.4
1,450,451 - CA264_06230 0.43 -0.8
1,450,663 + CA264_06230 0.63 -0.4
1,450,684 - CA264_06230 0.65 -1.7
1,450,684 - CA264_06230 0.65 +0.4
1,450,684 - CA264_06230 0.65 -2.7
1,450,704 + CA264_06230 0.67 -0.3
1,450,705 - CA264_06230 0.67 -0.5
1,450,705 - CA264_06230 0.67 -1.1
1,450,705 - CA264_06230 0.67 -0.6
1,450,707 + CA264_06230 0.67 +0.4
1,450,708 - CA264_06230 0.67 -1.1
1,450,816 - CA264_06230 0.77 -1.6
1,450,988 - -0.8
1,451,040 + -0.0
1,451,061 - -0.7
1,451,071 + -0.4
1,451,227 - CA264_06235 0.21 -0.7
1,451,228 + CA264_06235 0.21 +0.5
1,451,228 + CA264_06235 0.21 +0.1
1,451,228 + CA264_06235 0.21 +0.2
1,451,228 + CA264_06235 0.21 +0.5
1,451,229 - CA264_06235 0.22 -0.3
1,451,229 - CA264_06235 0.22 -0.6
1,451,229 - CA264_06235 0.22 -1.8
1,451,229 - CA264_06235 0.22 -2.4
1,451,262 + CA264_06235 0.26 +0.2
1,451,605 + CA264_06235 0.69 -1.1
1,451,667 + CA264_06235 0.77 +0.4
1,451,667 + CA264_06235 0.77 -0.2
1,451,746 + CA264_06235 0.87 -0.1
1,451,836 + +0.1
1,451,839 + +0.0
1,451,841 + -0.1
1,451,841 + +0.0
1,451,842 - -1.2
1,451,847 + -0.8
1,451,914 + -0.1
1,451,920 + -0.8
1,451,920 + -0.2
1,451,920 + +0.0
1,451,920 + -1.3
1,451,927 - -1.1
1,451,927 - -2.1
1,451,933 + -0.4
1,452,014 - -1.5
1,452,038 - -0.4
1,452,107 - CA264_06240 0.17 -0.8
1,452,194 + CA264_06240 0.26 -0.3
1,452,276 - CA264_06240 0.35 -1.1
1,452,291 + CA264_06240 0.36 +1.6
1,452,429 + CA264_06240 0.51 -2.0
1,452,429 + CA264_06240 0.51 -0.4
1,452,429 + CA264_06240 0.51 -0.5
1,452,506 - CA264_06240 0.59 -1.1
1,452,507 + CA264_06240 0.59 +0.6
1,452,532 - CA264_06240 0.62 -2.0
1,452,621 + CA264_06240 0.71 +0.6
1,452,772 + CA264_06240 0.87 -1.5
1,452,772 + CA264_06240 0.87 -1.1
1,452,809 + -0.7
1,452,809 + -0.7
1,452,815 + -0.6

Or see this region's nucleotide sequence