Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_06210

Experiment: m.b. Thallium(I) acetate 0.0025 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_06205 and CA264_06210 overlap by 8 nucleotidesCA264_06210 and CA264_06215 are separated by 3 nucleotidesCA264_06215 and CA264_06220 are separated by 182 nucleotides CA264_06205: CA264_06205 - glutamate--cysteine ligase, at 1,444,264 to 1,445,511 _06205 CA264_06210: CA264_06210 - glutathione synthase, at 1,445,504 to 1,446,979 _06210 CA264_06215: CA264_06215 - peptidase-C39 like family protein, at 1,446,983 to 1,447,705 _06215 CA264_06220: CA264_06220 - hypothetical protein, at 1,447,888 to 1,448,574 _06220 Position (kb) 1445 1446 1447Strain fitness (log2 ratio) -2 -1 0 1 2at 1444.528 kb on - strand, within CA264_06205at 1444.567 kb on + strand, within CA264_06205at 1444.583 kb on - strand, within CA264_06205at 1444.866 kb on + strand, within CA264_06205at 1445.060 kb on + strand, within CA264_06205at 1445.061 kb on - strand, within CA264_06205at 1445.061 kb on - strand, within CA264_06205at 1445.141 kb on + strand, within CA264_06205at 1445.250 kb on + strand, within CA264_06205at 1445.387 kb on + strandat 1445.388 kb on - strandat 1445.388 kb on - strandat 1445.388 kb on - strandat 1445.388 kb on - strandat 1445.406 kb on - strandat 1445.421 kb on + strandat 1445.463 kb on - strandat 1445.463 kb on - strandat 1445.527 kb on + strandat 1445.551 kb on + strandat 1445.558 kb on + strandat 1445.559 kb on - strandat 1445.559 kb on - strandat 1445.559 kb on - strandat 1445.559 kb on - strandat 1445.559 kb on - strandat 1445.569 kb on + strandat 1445.570 kb on - strandat 1445.570 kb on - strandat 1445.570 kb on - strandat 1445.570 kb on - strandat 1445.570 kb on - strandat 1445.571 kb on + strandat 1445.572 kb on - strandat 1445.594 kb on - strandat 1445.636 kb on + strandat 1445.636 kb on + strandat 1445.643 kb on + strandat 1445.644 kb on - strandat 1445.644 kb on - strandat 1445.805 kb on + strand, within CA264_06210at 1445.805 kb on + strand, within CA264_06210at 1445.805 kb on + strand, within CA264_06210at 1445.807 kb on + strand, within CA264_06210at 1445.807 kb on + strand, within CA264_06210at 1445.808 kb on - strand, within CA264_06210at 1445.832 kb on + strand, within CA264_06210at 1445.832 kb on + strand, within CA264_06210at 1445.833 kb on - strand, within CA264_06210at 1445.833 kb on - strand, within CA264_06210at 1445.833 kb on - strand, within CA264_06210at 1445.835 kb on + strand, within CA264_06210at 1445.836 kb on - strand, within CA264_06210at 1446.167 kb on + strand, within CA264_06210at 1446.210 kb on + strand, within CA264_06210at 1446.210 kb on + strand, within CA264_06210at 1446.214 kb on + strand, within CA264_06210at 1446.214 kb on + strand, within CA264_06210at 1446.214 kb on + strand, within CA264_06210at 1446.214 kb on + strand, within CA264_06210at 1446.214 kb on + strand, within CA264_06210at 1446.243 kb on - strand, within CA264_06210at 1446.243 kb on - strand, within CA264_06210at 1446.244 kb on + strand, within CA264_06210at 1446.244 kb on + strand, within CA264_06210at 1446.244 kb on + strand, within CA264_06210at 1446.245 kb on - strand, within CA264_06210at 1446.245 kb on - strand, within CA264_06210at 1446.245 kb on - strand, within CA264_06210at 1446.289 kb on + strand, within CA264_06210at 1446.304 kb on - strand, within CA264_06210at 1446.383 kb on + strand, within CA264_06210at 1446.402 kb on + strand, within CA264_06210at 1446.402 kb on + strand, within CA264_06210at 1446.403 kb on - strand, within CA264_06210at 1446.403 kb on - strand, within CA264_06210at 1446.601 kb on + strand, within CA264_06210at 1446.616 kb on - strand, within CA264_06210at 1446.642 kb on + strand, within CA264_06210at 1446.729 kb on - strand, within CA264_06210at 1446.810 kb on + strand, within CA264_06210at 1446.897 kb on + strandat 1446.898 kb on - strandat 1446.968 kb on + strandat 1446.989 kb on + strandat 1447.095 kb on + strand, within CA264_06215at 1447.095 kb on + strand, within CA264_06215at 1447.095 kb on + strand, within CA264_06215at 1447.096 kb on - strand, within CA264_06215at 1447.096 kb on - strand, within CA264_06215at 1447.140 kb on - strand, within CA264_06215at 1447.225 kb on + strand, within CA264_06215at 1447.266 kb on + strand, within CA264_06215at 1447.266 kb on + strand, within CA264_06215at 1447.266 kb on + strand, within CA264_06215at 1447.267 kb on - strand, within CA264_06215at 1447.463 kb on - strand, within CA264_06215at 1447.500 kb on + strand, within CA264_06215at 1447.501 kb on - strand, within CA264_06215at 1447.507 kb on - strand, within CA264_06215at 1447.577 kb on + strand, within CA264_06215at 1447.595 kb on - strand, within CA264_06215at 1447.624 kb on + strand, within CA264_06215at 1447.624 kb on + strand, within CA264_06215at 1447.635 kb on + strandat 1447.689 kb on - strandat 1447.712 kb on + strandat 1447.713 kb on - strandat 1447.732 kb on + strandat 1447.732 kb on + strandat 1447.732 kb on + strandat 1447.860 kb on + strandat 1447.862 kb on + strandat 1447.908 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.0025 mg/ml
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1,444,528 - CA264_06205 0.21 -0.9
1,444,567 + CA264_06205 0.24 -0.1
1,444,583 - CA264_06205 0.26 +0.0
1,444,866 + CA264_06205 0.48 +0.8
1,445,060 + CA264_06205 0.64 -0.6
1,445,061 - CA264_06205 0.64 -0.5
1,445,061 - CA264_06205 0.64 -1.6
1,445,141 + CA264_06205 0.70 +0.3
1,445,250 + CA264_06205 0.79 +0.9
1,445,387 + +0.6
1,445,388 - +0.8
1,445,388 - -0.0
1,445,388 - +0.1
1,445,388 - +0.0
1,445,406 - -1.8
1,445,421 + -0.4
1,445,463 - -0.8
1,445,463 - +1.2
1,445,527 + +0.4
1,445,551 + +0.2
1,445,558 + +0.4
1,445,559 - -0.8
1,445,559 - +0.5
1,445,559 - +0.0
1,445,559 - -0.9
1,445,559 - -1.1
1,445,569 + +0.5
1,445,570 - +0.7
1,445,570 - -1.4
1,445,570 - -0.8
1,445,570 - -1.9
1,445,570 - -0.6
1,445,571 + -2.5
1,445,572 - +0.0
1,445,594 - -0.7
1,445,636 + -0.4
1,445,636 + -0.1
1,445,643 + -1.2
1,445,644 - +0.1
1,445,644 - -1.5
1,445,805 + CA264_06210 0.20 -0.5
1,445,805 + CA264_06210 0.20 +0.5
1,445,805 + CA264_06210 0.20 -0.3
1,445,807 + CA264_06210 0.21 +2.2
1,445,807 + CA264_06210 0.21 -0.7
1,445,808 - CA264_06210 0.21 +0.2
1,445,832 + CA264_06210 0.22 -0.5
1,445,832 + CA264_06210 0.22 -0.7
1,445,833 - CA264_06210 0.22 -1.1
1,445,833 - CA264_06210 0.22 -0.6
1,445,833 - CA264_06210 0.22 -0.4
1,445,835 + CA264_06210 0.22 +0.8
1,445,836 - CA264_06210 0.22 -1.0
1,446,167 + CA264_06210 0.45 -1.1
1,446,210 + CA264_06210 0.48 -0.9
1,446,210 + CA264_06210 0.48 -0.7
1,446,214 + CA264_06210 0.48 -0.3
1,446,214 + CA264_06210 0.48 -1.0
1,446,214 + CA264_06210 0.48 -0.6
1,446,214 + CA264_06210 0.48 -1.3
1,446,214 + CA264_06210 0.48 -0.2
1,446,243 - CA264_06210 0.50 -1.2
1,446,243 - CA264_06210 0.50 -0.6
1,446,244 + CA264_06210 0.50 -0.5
1,446,244 + CA264_06210 0.50 +0.4
1,446,244 + CA264_06210 0.50 -1.3
1,446,245 - CA264_06210 0.50 -0.6
1,446,245 - CA264_06210 0.50 -0.1
1,446,245 - CA264_06210 0.50 +0.5
1,446,289 + CA264_06210 0.53 +0.2
1,446,304 - CA264_06210 0.54 -1.3
1,446,383 + CA264_06210 0.60 -0.1
1,446,402 + CA264_06210 0.61 -1.1
1,446,402 + CA264_06210 0.61 -1.2
1,446,403 - CA264_06210 0.61 -0.4
1,446,403 - CA264_06210 0.61 +0.9
1,446,601 + CA264_06210 0.74 +1.5
1,446,616 - CA264_06210 0.75 -1.7
1,446,642 + CA264_06210 0.77 -1.5
1,446,729 - CA264_06210 0.83 -0.1
1,446,810 + CA264_06210 0.88 -0.5
1,446,897 + -0.6
1,446,898 - +0.1
1,446,968 + -0.8
1,446,989 + -0.3
1,447,095 + CA264_06215 0.15 -0.5
1,447,095 + CA264_06215 0.15 -0.6
1,447,095 + CA264_06215 0.15 +0.1
1,447,096 - CA264_06215 0.16 -0.5
1,447,096 - CA264_06215 0.16 -0.5
1,447,140 - CA264_06215 0.22 -0.4
1,447,225 + CA264_06215 0.33 +0.9
1,447,266 + CA264_06215 0.39 -0.6
1,447,266 + CA264_06215 0.39 -0.3
1,447,266 + CA264_06215 0.39 -0.9
1,447,267 - CA264_06215 0.39 -0.9
1,447,463 - CA264_06215 0.66 -0.4
1,447,500 + CA264_06215 0.72 -0.0
1,447,501 - CA264_06215 0.72 +1.0
1,447,507 - CA264_06215 0.72 +0.8
1,447,577 + CA264_06215 0.82 -2.2
1,447,595 - CA264_06215 0.85 -0.2
1,447,624 + CA264_06215 0.89 -0.9
1,447,624 + CA264_06215 0.89 -1.2
1,447,635 + -2.0
1,447,689 - +0.3
1,447,712 + -0.8
1,447,713 - -0.4
1,447,732 + -0.2
1,447,732 + -1.4
1,447,732 + +0.4
1,447,860 + -1.1
1,447,862 + -0.2
1,447,908 - -0.6

Or see this region's nucleotide sequence