Experiment: m.b. Thallium(I) acetate 0.0025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_05605 and CA264_05610 are separated by 146 nucleotides CA264_05610 and CA264_05615 are separated by 48 nucleotides CA264_05615 and CA264_05620 are separated by 96 nucleotides
CA264_05605: CA264_05605 - RlmI/RlmK family 23S rRNA methyltransferase, at 1,302,924 to 1,304,108
_05605
CA264_05610: CA264_05610 - rRNA methyltransferase, at 1,304,255 to 1,305,655
_05610
CA264_05615: CA264_05615 - NUDIX hydrolase, at 1,305,704 to 1,306,090
_05615
CA264_05620: CA264_05620 - hypothetical protein, at 1,306,187 to 1,307,167
_05620
Position (kb)
1304
1305
1306 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1303.285 kb on - strand, within CA264_05605 at 1303.287 kb on - strand, within CA264_05605 at 1303.318 kb on + strand, within CA264_05605 at 1303.319 kb on - strand, within CA264_05605 at 1303.326 kb on + strand, within CA264_05605 at 1303.326 kb on + strand, within CA264_05605 at 1303.327 kb on - strand, within CA264_05605 at 1303.398 kb on - strand, within CA264_05605 at 1303.398 kb on - strand, within CA264_05605 at 1303.456 kb on - strand, within CA264_05605 at 1303.507 kb on - strand, within CA264_05605 at 1303.617 kb on + strand, within CA264_05605 at 1303.620 kb on - strand, within CA264_05605 at 1303.639 kb on - strand, within CA264_05605 at 1303.686 kb on - strand, within CA264_05605 at 1303.753 kb on - strand, within CA264_05605 at 1303.797 kb on + strand, within CA264_05605 at 1303.798 kb on - strand, within CA264_05605 at 1303.798 kb on - strand, within CA264_05605 at 1303.798 kb on - strand, within CA264_05605 at 1303.870 kb on - strand, within CA264_05605 at 1303.918 kb on + strand, within CA264_05605 at 1303.918 kb on + strand, within CA264_05605 at 1303.918 kb on + strand, within CA264_05605 at 1303.918 kb on + strand, within CA264_05605 at 1303.918 kb on + strand, within CA264_05605 at 1303.919 kb on - strand, within CA264_05605 at 1303.926 kb on - strand, within CA264_05605 at 1303.956 kb on + strand, within CA264_05605 at 1303.964 kb on + strand, within CA264_05605 at 1303.965 kb on - strand, within CA264_05605 at 1304.007 kb on - strand at 1304.049 kb on - strand at 1304.049 kb on - strand at 1304.055 kb on - strand at 1304.077 kb on - strand at 1304.114 kb on - strand at 1304.125 kb on - strand at 1304.143 kb on + strand at 1304.144 kb on - strand at 1304.150 kb on + strand at 1304.150 kb on + strand at 1304.152 kb on + strand at 1304.152 kb on + strand at 1304.152 kb on + strand at 1304.256 kb on + strand at 1304.256 kb on + strand at 1304.328 kb on + strand at 1304.328 kb on + strand at 1304.329 kb on - strand at 1304.329 kb on - strand at 1304.329 kb on - strand at 1304.329 kb on - strand at 1304.333 kb on - strand at 1304.333 kb on - strand at 1304.348 kb on + strand at 1304.348 kb on + strand at 1304.546 kb on - strand, within CA264_05610 at 1304.572 kb on - strand, within CA264_05610 at 1304.580 kb on + strand, within CA264_05610 at 1304.593 kb on - strand, within CA264_05610 at 1304.593 kb on - strand, within CA264_05610 at 1304.594 kb on + strand, within CA264_05610 at 1304.665 kb on - strand, within CA264_05610 at 1304.733 kb on + strand, within CA264_05610 at 1304.733 kb on + strand, within CA264_05610 at 1304.801 kb on - strand, within CA264_05610 at 1304.892 kb on - strand, within CA264_05610 at 1304.903 kb on + strand, within CA264_05610 at 1304.903 kb on + strand, within CA264_05610 at 1304.904 kb on - strand, within CA264_05610 at 1304.904 kb on - strand, within CA264_05610 at 1304.982 kb on + strand, within CA264_05610 at 1305.241 kb on + strand, within CA264_05610 at 1305.242 kb on - strand, within CA264_05610 at 1305.296 kb on + strand, within CA264_05610 at 1305.371 kb on + strand, within CA264_05610 at 1305.423 kb on + strand, within CA264_05610 at 1305.424 kb on - strand, within CA264_05610 at 1305.424 kb on - strand, within CA264_05610 at 1305.424 kb on - strand, within CA264_05610 at 1305.424 kb on - strand, within CA264_05610 at 1305.424 kb on - strand, within CA264_05610 at 1305.726 kb on + strand at 1305.765 kb on + strand, within CA264_05615 at 1305.765 kb on + strand, within CA264_05615 at 1305.765 kb on + strand, within CA264_05615 at 1305.766 kb on - strand, within CA264_05615 at 1305.766 kb on - strand, within CA264_05615 at 1305.766 kb on - strand, within CA264_05615 at 1305.766 kb on - strand, within CA264_05615 at 1305.766 kb on - strand, within CA264_05615 at 1305.766 kb on - strand, within CA264_05615 at 1305.821 kb on + strand, within CA264_05615 at 1305.849 kb on + strand, within CA264_05615 at 1305.850 kb on - strand, within CA264_05615 at 1305.854 kb on + strand, within CA264_05615 at 1305.888 kb on - strand, within CA264_05615 at 1305.929 kb on - strand, within CA264_05615 at 1306.079 kb on + strand at 1306.079 kb on + strand at 1306.080 kb on - strand at 1306.080 kb on - strand at 1306.083 kb on - strand at 1306.109 kb on + strand at 1306.122 kb on - strand at 1306.148 kb on + strand at 1306.215 kb on + strand at 1306.215 kb on + strand at 1306.216 kb on - strand at 1306.223 kb on - strand at 1306.224 kb on + strand at 1306.244 kb on - strand at 1306.253 kb on + strand at 1306.273 kb on + strand at 1306.274 kb on - strand at 1306.484 kb on - strand, within CA264_05620 at 1306.487 kb on + strand, within CA264_05620 at 1306.539 kb on + strand, within CA264_05620 at 1306.605 kb on + strand, within CA264_05620 at 1306.633 kb on - strand, within CA264_05620
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.0025 mg/ml remove 1,303,285 - CA264_05605 0.30 +2.2 1,303,287 - CA264_05605 0.31 +0.5 1,303,318 + CA264_05605 0.33 -1.7 1,303,319 - CA264_05605 0.33 +0.0 1,303,326 + CA264_05605 0.34 -0.5 1,303,326 + CA264_05605 0.34 -1.4 1,303,327 - CA264_05605 0.34 +1.3 1,303,398 - CA264_05605 0.40 +0.9 1,303,398 - CA264_05605 0.40 +0.8 1,303,456 - CA264_05605 0.45 -1.4 1,303,507 - CA264_05605 0.49 -0.2 1,303,617 + CA264_05605 0.58 -0.5 1,303,620 - CA264_05605 0.59 +1.4 1,303,639 - CA264_05605 0.60 -0.8 1,303,686 - CA264_05605 0.64 -1.0 1,303,753 - CA264_05605 0.70 +0.7 1,303,797 + CA264_05605 0.74 -1.4 1,303,798 - CA264_05605 0.74 +0.8 1,303,798 - CA264_05605 0.74 +1.1 1,303,798 - CA264_05605 0.74 +0.4 1,303,870 - CA264_05605 0.80 -1.1 1,303,918 + CA264_05605 0.84 -0.3 1,303,918 + CA264_05605 0.84 -2.2 1,303,918 + CA264_05605 0.84 +0.1 1,303,918 + CA264_05605 0.84 -1.5 1,303,918 + CA264_05605 0.84 -2.2 1,303,919 - CA264_05605 0.84 -0.4 1,303,926 - CA264_05605 0.85 +0.4 1,303,956 + CA264_05605 0.87 -0.8 1,303,964 + CA264_05605 0.88 -2.3 1,303,965 - CA264_05605 0.88 +1.0 1,304,007 - +1.1 1,304,049 - +0.1 1,304,049 - +0.0 1,304,055 - +1.0 1,304,077 - +1.8 1,304,114 - +0.9 1,304,125 - +0.8 1,304,143 + -0.3 1,304,144 - +0.4 1,304,150 + +0.1 1,304,150 + +1.4 1,304,152 + +1.1 1,304,152 + +0.4 1,304,152 + -0.2 1,304,256 + +0.0 1,304,256 + +1.0 1,304,328 + -0.3 1,304,328 + -0.2 1,304,329 - -1.4 1,304,329 - -1.3 1,304,329 - -1.9 1,304,329 - -0.7 1,304,333 - -1.3 1,304,333 - -1.8 1,304,348 + +1.2 1,304,348 + -0.1 1,304,546 - CA264_05610 0.21 +0.4 1,304,572 - CA264_05610 0.23 -0.8 1,304,580 + CA264_05610 0.23 -0.3 1,304,593 - CA264_05610 0.24 -1.3 1,304,593 - CA264_05610 0.24 -0.5 1,304,594 + CA264_05610 0.24 -0.5 1,304,665 - CA264_05610 0.29 -2.1 1,304,733 + CA264_05610 0.34 +0.7 1,304,733 + CA264_05610 0.34 -1.4 1,304,801 - CA264_05610 0.39 -1.8 1,304,892 - CA264_05610 0.45 -2.3 1,304,903 + CA264_05610 0.46 -0.6 1,304,903 + CA264_05610 0.46 -1.1 1,304,904 - CA264_05610 0.46 -1.1 1,304,904 - CA264_05610 0.46 +1.2 1,304,982 + CA264_05610 0.52 +1.3 1,305,241 + CA264_05610 0.70 -1.5 1,305,242 - CA264_05610 0.70 -2.4 1,305,296 + CA264_05610 0.74 +0.4 1,305,371 + CA264_05610 0.80 -0.2 1,305,423 + CA264_05610 0.83 -2.1 1,305,424 - CA264_05610 0.83 -1.3 1,305,424 - CA264_05610 0.83 -2.0 1,305,424 - CA264_05610 0.83 -2.7 1,305,424 - CA264_05610 0.83 -0.8 1,305,424 - CA264_05610 0.83 -1.9 1,305,726 + -0.6 1,305,765 + CA264_05615 0.16 +0.2 1,305,765 + CA264_05615 0.16 +1.2 1,305,765 + CA264_05615 0.16 -0.8 1,305,766 - CA264_05615 0.16 -0.6 1,305,766 - CA264_05615 0.16 -1.3 1,305,766 - CA264_05615 0.16 +0.9 1,305,766 - CA264_05615 0.16 -0.6 1,305,766 - CA264_05615 0.16 -1.0 1,305,766 - CA264_05615 0.16 -1.5 1,305,821 + CA264_05615 0.30 -0.3 1,305,849 + CA264_05615 0.37 +0.2 1,305,850 - CA264_05615 0.38 -0.2 1,305,854 + CA264_05615 0.39 +0.5 1,305,888 - CA264_05615 0.48 -2.3 1,305,929 - CA264_05615 0.58 -1.2 1,306,079 + +0.1 1,306,079 + -0.6 1,306,080 - -0.3 1,306,080 - -0.8 1,306,083 - -0.8 1,306,109 + +0.1 1,306,122 - -0.3 1,306,148 + +0.6 1,306,215 + -0.4 1,306,215 + -2.9 1,306,216 - -1.0 1,306,223 - -0.1 1,306,224 + -1.1 1,306,244 - -0.1 1,306,253 + +0.5 1,306,273 + -0.4 1,306,274 - -0.5 1,306,484 - CA264_05620 0.30 -0.3 1,306,487 + CA264_05620 0.31 -0.3 1,306,539 + CA264_05620 0.36 -0.5 1,306,605 + CA264_05620 0.43 -1.2 1,306,633 - CA264_05620 0.45 -0.3
Or see this region's nucleotide sequence