Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_05465

Experiment: m.b. Thallium(I) acetate 0.0025 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_05460 and CA264_05465 are separated by 532 nucleotidesCA264_05465 and CA264_05470 are separated by 45 nucleotidesCA264_05470 and CA264_05475 are separated by 43 nucleotides CA264_05460: CA264_05460 - hypothetical protein, at 1,267,397 to 1,269,655 _05460 CA264_05465: CA264_05465 - thymidylate synthase, at 1,270,188 to 1,270,982 _05465 CA264_05470: CA264_05470 - hypothetical protein, at 1,271,028 to 1,271,486 _05470 CA264_05475: CA264_05475 - MBL fold metallo-hydrolase, at 1,271,530 to 1,272,294 _05475 Position (kb) 1270 1271Strain fitness (log2 ratio) -2 -1 0 1 2at 1269.197 kb on + strand, within CA264_05460at 1269.247 kb on + strand, within CA264_05460at 1269.249 kb on + strand, within CA264_05460at 1269.249 kb on + strand, within CA264_05460at 1269.249 kb on + strand, within CA264_05460at 1269.250 kb on - strand, within CA264_05460at 1269.250 kb on - strand, within CA264_05460at 1269.250 kb on - strand, within CA264_05460at 1269.250 kb on - strand, within CA264_05460at 1269.288 kb on + strand, within CA264_05460at 1269.289 kb on - strand, within CA264_05460at 1269.352 kb on + strand, within CA264_05460at 1269.472 kb on + strandat 1269.473 kb on - strandat 1269.474 kb on + strandat 1269.505 kb on - strandat 1269.508 kb on + strandat 1269.509 kb on - strandat 1269.562 kb on - strandat 1269.638 kb on + strandat 1269.649 kb on - strandat 1269.688 kb on - strandat 1269.753 kb on - strandat 1269.786 kb on + strandat 1269.786 kb on + strandat 1269.786 kb on + strandat 1269.786 kb on + strandat 1269.787 kb on - strandat 1269.787 kb on - strandat 1269.787 kb on - strandat 1269.788 kb on + strandat 1269.788 kb on + strandat 1269.788 kb on + strandat 1269.788 kb on + strandat 1269.788 kb on + strandat 1269.788 kb on + strandat 1269.788 kb on + strandat 1269.789 kb on - strandat 1269.789 kb on - strandat 1269.789 kb on - strandat 1269.792 kb on + strandat 1269.792 kb on + strandat 1269.792 kb on + strandat 1269.792 kb on + strandat 1269.792 kb on + strandat 1269.792 kb on + strandat 1269.792 kb on + strandat 1269.792 kb on + strandat 1269.792 kb on + strandat 1269.792 kb on + strandat 1269.792 kb on + strandat 1269.792 kb on + strandat 1269.792 kb on + strandat 1269.792 kb on + strandat 1269.792 kb on + strandat 1269.793 kb on - strandat 1269.793 kb on - strandat 1269.793 kb on - strandat 1269.793 kb on - strandat 1269.800 kb on + strandat 1269.800 kb on + strandat 1269.801 kb on - strandat 1269.801 kb on - strandat 1269.848 kb on + strandat 1269.848 kb on + strandat 1269.929 kb on - strandat 1269.930 kb on + strandat 1269.930 kb on + strandat 1269.931 kb on - strandat 1269.931 kb on - strandat 1269.934 kb on + strandat 1269.934 kb on + strandat 1269.934 kb on + strandat 1269.934 kb on + strandat 1269.935 kb on - strandat 1269.935 kb on - strandat 1269.935 kb on - strandat 1269.974 kb on - strandat 1269.983 kb on + strandat 1269.986 kb on - strandat 1270.024 kb on + strandat 1270.106 kb on + strandat 1270.106 kb on + strandat 1270.107 kb on - strandat 1270.107 kb on - strandat 1270.107 kb on - strandat 1270.107 kb on - strandat 1270.108 kb on + strandat 1270.108 kb on + strandat 1270.152 kb on + strandat 1270.152 kb on + strandat 1270.153 kb on - strandat 1270.153 kb on - strandat 1270.171 kb on + strandat 1270.171 kb on + strandat 1270.171 kb on + strandat 1270.172 kb on - strandat 1270.172 kb on - strandat 1270.980 kb on + strandat 1270.981 kb on - strandat 1270.981 kb on - strandat 1270.981 kb on - strandat 1270.981 kb on - strandat 1271.004 kb on + strandat 1271.005 kb on - strandat 1271.148 kb on - strand, within CA264_05470at 1271.191 kb on - strand, within CA264_05470at 1271.232 kb on + strand, within CA264_05470at 1271.402 kb on + strand, within CA264_05470at 1271.402 kb on + strand, within CA264_05470at 1271.402 kb on + strand, within CA264_05470at 1271.402 kb on + strand, within CA264_05470at 1271.403 kb on - strand, within CA264_05470at 1271.403 kb on - strand, within CA264_05470at 1271.418 kb on + strand, within CA264_05470at 1271.442 kb on - strandat 1271.472 kb on + strandat 1271.472 kb on + strandat 1271.484 kb on + strandat 1271.498 kb on - strandat 1271.529 kb on + strandat 1271.610 kb on + strand, within CA264_05475at 1271.677 kb on + strand, within CA264_05475at 1271.678 kb on - strand, within CA264_05475at 1271.678 kb on - strand, within CA264_05475at 1271.691 kb on + strand, within CA264_05475at 1271.692 kb on - strand, within CA264_05475at 1271.695 kb on + strand, within CA264_05475at 1271.695 kb on + strand, within CA264_05475at 1271.695 kb on + strandat 1271.869 kb on + strand, within CA264_05475at 1271.870 kb on - strand, within CA264_05475at 1271.947 kb on + strand, within CA264_05475at 1271.947 kb on + strand, within CA264_05475at 1271.948 kb on - strand, within CA264_05475at 1271.948 kb on - strand, within CA264_05475at 1271.949 kb on + strand, within CA264_05475

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.0025 mg/ml
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1,269,197 + CA264_05460 0.80 +0.2
1,269,247 + CA264_05460 0.82 -1.2
1,269,249 + CA264_05460 0.82 +0.0
1,269,249 + CA264_05460 0.82 -2.0
1,269,249 + CA264_05460 0.82 -0.2
1,269,250 - CA264_05460 0.82 +1.5
1,269,250 - CA264_05460 0.82 -0.2
1,269,250 - CA264_05460 0.82 -1.4
1,269,250 - CA264_05460 0.82 -0.4
1,269,288 + CA264_05460 0.84 -0.1
1,269,289 - CA264_05460 0.84 -0.3
1,269,352 + CA264_05460 0.87 -0.0
1,269,472 + -1.4
1,269,473 - +0.4
1,269,474 + +0.8
1,269,505 - +1.0
1,269,508 + -0.3
1,269,509 - -1.4
1,269,562 - +0.1
1,269,638 + +0.5
1,269,649 - -0.4
1,269,688 - +1.0
1,269,753 - +0.0
1,269,786 + +1.6
1,269,786 + +0.1
1,269,786 + +0.8
1,269,786 + +0.1
1,269,787 - +0.6
1,269,787 - +0.5
1,269,787 - +0.8
1,269,788 + +0.1
1,269,788 + -0.7
1,269,788 + +0.9
1,269,788 + -1.5
1,269,788 + -0.9
1,269,788 + -1.5
1,269,788 + +0.7
1,269,789 - -1.2
1,269,789 - -1.9
1,269,789 - +0.4
1,269,792 + -0.7
1,269,792 + +0.2
1,269,792 + -0.9
1,269,792 + -2.5
1,269,792 + -0.4
1,269,792 + -0.3
1,269,792 + -0.6
1,269,792 + -1.1
1,269,792 + -0.2
1,269,792 + +0.3
1,269,792 + +0.3
1,269,792 + +0.5
1,269,792 + +0.8
1,269,792 + -0.2
1,269,792 + +0.5
1,269,793 - +0.1
1,269,793 - +0.3
1,269,793 - -1.0
1,269,793 - -0.9
1,269,800 + -0.2
1,269,800 + +0.1
1,269,801 - +0.9
1,269,801 - +0.3
1,269,848 + +0.8
1,269,848 + +0.2
1,269,929 - -0.1
1,269,930 + +0.1
1,269,930 + -0.4
1,269,931 - +1.2
1,269,931 - +0.4
1,269,934 + -0.2
1,269,934 + +0.2
1,269,934 + -0.6
1,269,934 + -0.4
1,269,935 - +0.3
1,269,935 - -0.1
1,269,935 - -0.3
1,269,974 - +0.5
1,269,983 + -0.4
1,269,986 - -0.4
1,270,024 + -0.2
1,270,106 + -2.2
1,270,106 + -1.0
1,270,107 - -2.3
1,270,107 - +0.6
1,270,107 - -0.2
1,270,107 - -0.1
1,270,108 + -0.9
1,270,108 + -1.3
1,270,152 + -0.7
1,270,152 + -0.5
1,270,153 - +0.5
1,270,153 - +0.1
1,270,171 + +0.2
1,270,171 + +0.0
1,270,171 + -1.1
1,270,172 - +0.8
1,270,172 - +0.3
1,270,980 + -0.6
1,270,981 - +1.0
1,270,981 - +0.0
1,270,981 - +0.4
1,270,981 - -0.2
1,271,004 + -1.5
1,271,005 - +0.6
1,271,148 - CA264_05470 0.26 +0.3
1,271,191 - CA264_05470 0.36 +2.0
1,271,232 + CA264_05470 0.44 -2.4
1,271,402 + CA264_05470 0.81 -1.8
1,271,402 + CA264_05470 0.81 -0.5
1,271,402 + CA264_05470 0.81 -1.2
1,271,402 + CA264_05470 0.81 -2.1
1,271,403 - CA264_05470 0.82 +0.5
1,271,403 - CA264_05470 0.82 +0.6
1,271,418 + CA264_05470 0.85 -2.2
1,271,442 - +0.2
1,271,472 + +1.6
1,271,472 + -1.0
1,271,484 + -0.5
1,271,498 - -0.1
1,271,529 + +0.4
1,271,610 + CA264_05475 0.10 -2.3
1,271,677 + CA264_05475 0.19 -0.4
1,271,678 - CA264_05475 0.19 -0.6
1,271,678 - CA264_05475 0.19 +0.5
1,271,691 + CA264_05475 0.21 -2.0
1,271,692 - CA264_05475 0.21 +0.9
1,271,695 + CA264_05475 0.22 +0.0
1,271,695 + CA264_05475 0.22 -1.1
1,271,695 + +1.4
1,271,869 + CA264_05475 0.44 -1.1
1,271,870 - CA264_05475 0.44 -1.5
1,271,947 + CA264_05475 0.55 +0.8
1,271,947 + CA264_05475 0.55 -2.0
1,271,948 - CA264_05475 0.55 +0.4
1,271,948 - CA264_05475 0.55 +0.2
1,271,949 + CA264_05475 0.55 +1.0

Or see this region's nucleotide sequence