Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_04125

Experiment: m.b. Thallium(I) acetate 0.0025 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_04115 and CA264_04120 are separated by 302 nucleotidesCA264_04120 and CA264_04125 are separated by 188 nucleotidesCA264_04125 and CA264_04130 are separated by 935 nucleotides CA264_04115: CA264_04115 - hypothetical protein, at 953,899 to 954,834 _04115 CA264_04120: CA264_04120 - hypothetical protein, at 955,137 to 955,421 _04120 CA264_04125: CA264_04125 - hypothetical protein, at 955,610 to 955,945 _04125 CA264_04130: CA264_04130 - hypothetical protein, at 956,881 to 957,735 _04130 Position (kb) 955 956Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 954.684 kb on + strand, within CA264_04115at 954.717 kb on + strand, within CA264_04115at 954.718 kb on - strand, within CA264_04115at 954.718 kb on - strand, within CA264_04115at 954.720 kb on + strand, within CA264_04115at 954.721 kb on - strand, within CA264_04115at 954.721 kb on - strand, within CA264_04115at 954.832 kb on + strandat 954.833 kb on - strandat 954.833 kb on - strandat 954.872 kb on - strandat 954.874 kb on - strandat 954.877 kb on + strandat 954.877 kb on + strandat 954.878 kb on - strandat 954.898 kb on + strandat 954.899 kb on - strandat 954.899 kb on - strandat 954.899 kb on - strandat 954.902 kb on - strandat 954.970 kb on + strandat 954.989 kb on + strandat 954.996 kb on - strandat 954.996 kb on - strandat 954.996 kb on - strandat 954.997 kb on + strandat 954.997 kb on + strandat 954.997 kb on + strandat 955.007 kb on + strandat 955.132 kb on + strandat 955.133 kb on - strandat 955.164 kb on - strandat 955.165 kb on + strandat 955.166 kb on - strandat 955.166 kb on - strand, within CA264_04120at 955.166 kb on - strand, within CA264_04120at 955.166 kb on - strand, within CA264_04120at 955.169 kb on + strand, within CA264_04120at 955.169 kb on + strand, within CA264_04120at 955.170 kb on - strand, within CA264_04120at 955.170 kb on - strand, within CA264_04120at 955.170 kb on - strand, within CA264_04120at 955.377 kb on - strand, within CA264_04120at 955.377 kb on - strand, within CA264_04120at 955.398 kb on + strandat 955.449 kb on + strandat 955.487 kb on + strandat 955.487 kb on + strandat 955.487 kb on + strandat 955.488 kb on - strandat 955.488 kb on - strandat 955.488 kb on - strandat 955.488 kb on - strandat 955.492 kb on - strandat 955.492 kb on - strandat 955.494 kb on - strandat 955.579 kb on - strandat 955.579 kb on - strandat 955.588 kb on + strandat 955.619 kb on - strandat 955.642 kb on - strandat 955.688 kb on - strand, within CA264_04125at 955.733 kb on + strand, within CA264_04125at 955.801 kb on + strand, within CA264_04125at 955.801 kb on + strand, within CA264_04125at 955.808 kb on - strand, within CA264_04125at 955.814 kb on + strand, within CA264_04125at 955.943 kb on + strandat 955.944 kb on - strandat 955.944 kb on - strandat 955.989 kb on + strandat 956.024 kb on + strandat 956.025 kb on - strandat 956.101 kb on + strandat 956.102 kb on - strandat 956.105 kb on + strandat 956.105 kb on + strandat 956.123 kb on + strandat 956.123 kb on + strandat 956.123 kb on + strandat 956.123 kb on + strandat 956.124 kb on - strandat 956.124 kb on - strandat 956.168 kb on - strandat 956.173 kb on + strandat 956.173 kb on + strandat 956.174 kb on - strandat 956.174 kb on - strandat 956.174 kb on - strandat 956.191 kb on + strandat 956.191 kb on + strandat 956.192 kb on - strandat 956.219 kb on + strandat 956.240 kb on - strandat 956.345 kb on + strandat 956.422 kb on + strandat 956.423 kb on - strandat 956.496 kb on - strandat 956.504 kb on - strandat 956.507 kb on - strandat 956.520 kb on - strandat 956.527 kb on - strandat 956.527 kb on - strandat 956.573 kb on - strandat 956.625 kb on + strandat 956.625 kb on + strandat 956.625 kb on + strandat 956.625 kb on + strandat 956.626 kb on - strandat 956.626 kb on - strandat 956.627 kb on + strandat 956.627 kb on + strandat 956.627 kb on + strandat 956.628 kb on - strandat 956.628 kb on - strandat 956.628 kb on - strandat 956.668 kb on + strandat 956.693 kb on + strandat 956.698 kb on - strandat 956.698 kb on - strandat 956.715 kb on + strandat 956.715 kb on + strandat 956.716 kb on - strandat 956.721 kb on + strandat 956.770 kb on - strandat 956.770 kb on - strandat 956.852 kb on + strandat 956.858 kb on + strandat 956.922 kb on + strandat 956.929 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.0025 mg/ml
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954,684 + CA264_04115 0.84 -0.8
954,717 + CA264_04115 0.87 -1.6
954,718 - CA264_04115 0.88 +0.4
954,718 - CA264_04115 0.88 +0.8
954,720 + CA264_04115 0.88 +0.2
954,721 - CA264_04115 0.88 +0.5
954,721 - CA264_04115 0.88 -0.1
954,832 + -0.5
954,833 - -0.1
954,833 - -2.4
954,872 - -0.1
954,874 - +1.2
954,877 + -0.3
954,877 + -0.5
954,878 - +0.6
954,898 + -0.8
954,899 - -0.4
954,899 - -1.0
954,899 - +0.5
954,902 - +1.8
954,970 + -0.4
954,989 + +0.9
954,996 - +0.3
954,996 - +0.5
954,996 - -0.0
954,997 + -0.9
954,997 + +1.6
954,997 + -0.6
955,007 + -1.5
955,132 + -2.4
955,133 - +1.3
955,164 - +0.8
955,165 + -3.7
955,166 - +0.5
955,166 - CA264_04120 0.10 -2.2
955,166 - CA264_04120 0.10 +0.3
955,166 - CA264_04120 0.10 +0.7
955,169 + CA264_04120 0.11 -0.5
955,169 + CA264_04120 0.11 -2.5
955,170 - CA264_04120 0.12 +1.2
955,170 - CA264_04120 0.12 -0.2
955,170 - CA264_04120 0.12 +0.6
955,377 - CA264_04120 0.84 +0.5
955,377 - CA264_04120 0.84 +0.4
955,398 + -0.7
955,449 + -1.0
955,487 + +0.9
955,487 + -1.3
955,487 + -1.8
955,488 - +0.5
955,488 - +0.1
955,488 - +1.1
955,488 - +1.3
955,492 - -1.7
955,492 - +0.5
955,494 - +0.5
955,579 - -1.8
955,579 - -2.2
955,588 + -0.5
955,619 - -2.1
955,642 - -1.2
955,688 - CA264_04125 0.23 +0.5
955,733 + CA264_04125 0.37 -0.4
955,801 + CA264_04125 0.57 -1.7
955,801 + CA264_04125 0.57 -1.7
955,808 - CA264_04125 0.59 -0.9
955,814 + CA264_04125 0.61 -2.0
955,943 + -1.4
955,944 - -0.0
955,944 - -0.0
955,989 + -0.3
956,024 + -1.6
956,025 - +0.2
956,101 + +0.2
956,102 - -1.2
956,105 + -0.8
956,105 + +0.9
956,123 + -1.4
956,123 + -1.5
956,123 + -0.9
956,123 + -1.3
956,124 - +0.3
956,124 - -0.7
956,168 - +0.2
956,173 + -1.7
956,173 + -0.6
956,174 - -0.3
956,174 - -0.2
956,174 - -0.6
956,191 + +0.3
956,191 + -1.4
956,192 - +0.1
956,219 + +1.3
956,240 - +0.5
956,345 + -0.4
956,422 + -0.4
956,423 - -0.7
956,496 - -0.0
956,504 - +0.3
956,507 - +0.9
956,520 - +1.1
956,527 - -1.9
956,527 - -0.2
956,573 - -2.1
956,625 + -0.2
956,625 + +1.8
956,625 + -0.4
956,625 + -1.3
956,626 - +0.2
956,626 - +1.2
956,627 + -2.7
956,627 + +0.6
956,627 + -0.9
956,628 - +1.1
956,628 - -0.2
956,628 - -0.2
956,668 + +1.2
956,693 + -2.7
956,698 - +0.1
956,698 - +0.5
956,715 + +0.5
956,715 + +0.7
956,716 - -0.2
956,721 + -1.7
956,770 - -0.2
956,770 - +0.0
956,852 + -0.2
956,858 + +0.4
956,922 + -0.3
956,929 + -1.2

Or see this region's nucleotide sequence