Experiment: m.b. Thallium(I) acetate 0.0025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_02810 and CA264_02815 are separated by 87 nucleotides CA264_02815 and CA264_02820 are separated by 84 nucleotides CA264_02820 and CA264_02825 are separated by 72 nucleotides
CA264_02810: CA264_02810 - thrombospondin type 3 repeat-containing protein, at 646,212 to 646,859
_02810
CA264_02815: CA264_02815 - ketoacyl reductase, at 646,947 to 647,966
_02815
CA264_02820: CA264_02820 - GDP-mannose pyrophosphatase, at 648,051 to 648,572
_02820
CA264_02825: CA264_02825 - hypothetical protein, at 648,645 to 649,355
_02825
Position (kb) 646
647
648 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 645.990 kb on + strand at 645.991 kb on - strand at 645.992 kb on + strand at 645.993 kb on - strand at 645.998 kb on + strand at 645.999 kb on - strand at 645.999 kb on - strand at 645.999 kb on - strand at 646.034 kb on - strand at 646.038 kb on + strand at 646.109 kb on - strand at 646.124 kb on + strand at 646.125 kb on - strand at 646.126 kb on + strand at 646.126 kb on + strand at 646.126 kb on + strand at 646.127 kb on - strand at 646.127 kb on - strand at 646.161 kb on + strand at 646.162 kb on - strand at 646.235 kb on + strand at 646.256 kb on + strand at 646.297 kb on + strand, within CA264_02810 at 646.315 kb on - strand, within CA264_02810 at 646.356 kb on + strand, within CA264_02810 at 646.486 kb on - strand, within CA264_02810 at 646.519 kb on - strand, within CA264_02810 at 646.545 kb on + strand, within CA264_02810 at 646.548 kb on + strand, within CA264_02810 at 646.548 kb on + strand, within CA264_02810 at 646.549 kb on - strand, within CA264_02810 at 646.602 kb on + strand, within CA264_02810 at 646.603 kb on - strand, within CA264_02810 at 646.621 kb on - strand, within CA264_02810 at 646.708 kb on - strand, within CA264_02810 at 646.708 kb on - strand, within CA264_02810 at 646.857 kb on + strand at 646.862 kb on - strand at 646.862 kb on - strand at 646.862 kb on - strand at 646.864 kb on - strand at 646.896 kb on + strand at 646.896 kb on + strand at 646.913 kb on - strand at 646.927 kb on + strand at 646.958 kb on + strand at 646.958 kb on + strand at 646.967 kb on + strand at 646.968 kb on - strand at 647.060 kb on - strand, within CA264_02815 at 647.098 kb on + strand, within CA264_02815 at 647.153 kb on + strand, within CA264_02815 at 647.154 kb on - strand, within CA264_02815 at 647.202 kb on - strand, within CA264_02815 at 647.227 kb on + strand, within CA264_02815 at 647.246 kb on - strand, within CA264_02815 at 647.380 kb on - strand, within CA264_02815 at 647.392 kb on + strand, within CA264_02815 at 647.392 kb on + strand, within CA264_02815 at 647.393 kb on - strand, within CA264_02815 at 647.393 kb on - strand, within CA264_02815 at 647.393 kb on - strand, within CA264_02815 at 647.444 kb on + strand, within CA264_02815 at 647.476 kb on + strand, within CA264_02815 at 647.476 kb on + strand, within CA264_02815 at 647.477 kb on - strand, within CA264_02815 at 647.500 kb on - strand, within CA264_02815 at 647.562 kb on + strand, within CA264_02815 at 647.563 kb on - strand, within CA264_02815 at 647.563 kb on - strand, within CA264_02815 at 647.563 kb on - strand, within CA264_02815 at 647.563 kb on - strand, within CA264_02815 at 647.565 kb on - strand, within CA264_02815 at 647.565 kb on - strand, within CA264_02815 at 647.565 kb on - strand, within CA264_02815 at 647.576 kb on - strand, within CA264_02815 at 647.576 kb on - strand, within CA264_02815 at 647.576 kb on - strand, within CA264_02815 at 647.609 kb on + strand, within CA264_02815 at 647.653 kb on - strand, within CA264_02815 at 647.723 kb on - strand, within CA264_02815 at 647.815 kb on + strand, within CA264_02815 at 647.816 kb on - strand, within CA264_02815 at 647.933 kb on + strand at 647.934 kb on - strand at 647.972 kb on + strand at 647.973 kb on - strand at 647.974 kb on + strand at 648.048 kb on + strand at 648.049 kb on - strand at 648.049 kb on - strand at 648.049 kb on - strand at 648.099 kb on + strand at 648.101 kb on + strand at 648.296 kb on + strand, within CA264_02820 at 648.297 kb on - strand, within CA264_02820 at 648.297 kb on - strand, within CA264_02820 at 648.297 kb on - strand, within CA264_02820 at 648.298 kb on + strand, within CA264_02820 at 648.310 kb on + strand, within CA264_02820 at 648.310 kb on + strand, within CA264_02820 at 648.311 kb on - strand, within CA264_02820 at 648.311 kb on - strand, within CA264_02820 at 648.356 kb on + strand, within CA264_02820 at 648.357 kb on - strand, within CA264_02820 at 648.357 kb on - strand, within CA264_02820 at 648.402 kb on + strand, within CA264_02820 at 648.403 kb on - strand, within CA264_02820 at 648.403 kb on - strand, within CA264_02820 at 648.571 kb on - strand at 648.571 kb on - strand at 648.573 kb on + strand at 648.595 kb on + strand at 648.595 kb on + strand at 648.598 kb on + strand at 648.604 kb on + strand at 648.610 kb on - strand at 648.633 kb on - strand at 648.647 kb on - strand at 648.647 kb on - strand at 648.729 kb on - strand, within CA264_02825 at 648.791 kb on - strand, within CA264_02825 at 648.791 kb on - strand, within CA264_02825 at 648.791 kb on - strand, within CA264_02825 at 648.801 kb on + strand, within CA264_02825 at 648.802 kb on - strand, within CA264_02825 at 648.802 kb on - strand, within CA264_02825 at 648.805 kb on + strand, within CA264_02825 at 648.805 kb on + strand, within CA264_02825 at 648.805 kb on + strand, within CA264_02825 at 648.806 kb on - strand, within CA264_02825 at 648.806 kb on - strand, within CA264_02825 at 648.921 kb on + strand, within CA264_02825
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.0025 mg/ml remove 645,990 + -0.4 645,991 - +0.1 645,992 + -0.6 645,993 - -1.0 645,998 + -0.3 645,999 - -2.6 645,999 - -0.3 645,999 - -0.2 646,034 - -2.1 646,038 + -1.7 646,109 - -0.7 646,124 + -2.5 646,125 - +0.9 646,126 + -0.7 646,126 + +0.1 646,126 + -1.1 646,127 - -0.1 646,127 - -0.2 646,161 + -1.1 646,162 - -0.9 646,235 + -0.1 646,256 + -0.9 646,297 + CA264_02810 0.13 -0.6 646,315 - CA264_02810 0.16 -0.5 646,356 + CA264_02810 0.22 -1.1 646,486 - CA264_02810 0.42 -1.9 646,519 - CA264_02810 0.47 -0.3 646,545 + CA264_02810 0.51 -0.7 646,548 + CA264_02810 0.52 -1.8 646,548 + CA264_02810 0.52 -2.4 646,549 - CA264_02810 0.52 -1.5 646,602 + CA264_02810 0.60 -1.2 646,603 - CA264_02810 0.60 -1.2 646,621 - CA264_02810 0.63 -0.2 646,708 - CA264_02810 0.77 +1.0 646,708 - CA264_02810 0.77 -0.2 646,857 + -0.5 646,862 - -1.4 646,862 - +0.1 646,862 - -0.1 646,864 - -0.4 646,896 + -0.2 646,896 + -1.4 646,913 - -1.1 646,927 + -2.9 646,958 + -0.3 646,958 + -0.9 646,967 + -0.7 646,968 - -2.5 647,060 - CA264_02815 0.11 -2.2 647,098 + CA264_02815 0.15 -1.5 647,153 + CA264_02815 0.20 -1.0 647,154 - CA264_02815 0.20 -1.3 647,202 - CA264_02815 0.25 -0.9 647,227 + CA264_02815 0.27 -1.2 647,246 - CA264_02815 0.29 -1.2 647,380 - CA264_02815 0.42 +0.8 647,392 + CA264_02815 0.44 -0.8 647,392 + CA264_02815 0.44 -0.7 647,393 - CA264_02815 0.44 +0.0 647,393 - CA264_02815 0.44 +1.9 647,393 - CA264_02815 0.44 -0.3 647,444 + CA264_02815 0.49 -1.7 647,476 + CA264_02815 0.52 -1.7 647,476 + CA264_02815 0.52 -1.5 647,477 - CA264_02815 0.52 -1.2 647,500 - CA264_02815 0.54 -0.4 647,562 + CA264_02815 0.60 -0.5 647,563 - CA264_02815 0.60 +0.9 647,563 - CA264_02815 0.60 +0.2 647,563 - CA264_02815 0.60 +0.3 647,563 - CA264_02815 0.60 +0.4 647,565 - CA264_02815 0.61 -1.5 647,565 - CA264_02815 0.61 +0.7 647,565 - CA264_02815 0.61 +0.4 647,576 - CA264_02815 0.62 -0.1 647,576 - CA264_02815 0.62 -0.1 647,576 - CA264_02815 0.62 +2.0 647,609 + CA264_02815 0.65 -2.0 647,653 - CA264_02815 0.69 -0.6 647,723 - CA264_02815 0.76 -0.3 647,815 + CA264_02815 0.85 -0.6 647,816 - CA264_02815 0.85 -0.5 647,933 + -1.1 647,934 - -0.8 647,972 + -1.4 647,973 - +1.0 647,974 + -1.3 648,048 + -1.7 648,049 - +0.1 648,049 - +0.2 648,049 - +0.5 648,099 + -1.0 648,101 + -1.4 648,296 + CA264_02820 0.47 -1.4 648,297 - CA264_02820 0.47 -0.2 648,297 - CA264_02820 0.47 +0.5 648,297 - CA264_02820 0.47 +1.2 648,298 + CA264_02820 0.47 -2.2 648,310 + CA264_02820 0.50 -1.6 648,310 + CA264_02820 0.50 +0.4 648,311 - CA264_02820 0.50 +1.1 648,311 - CA264_02820 0.50 -0.4 648,356 + CA264_02820 0.58 -0.7 648,357 - CA264_02820 0.59 -0.2 648,357 - CA264_02820 0.59 +1.0 648,402 + CA264_02820 0.67 -1.8 648,403 - CA264_02820 0.67 +0.8 648,403 - CA264_02820 0.67 -0.1 648,571 - +1.5 648,571 - -0.2 648,573 + -1.7 648,595 + -1.0 648,595 + -1.5 648,598 + -1.4 648,604 + -1.3 648,610 - +0.4 648,633 - +0.5 648,647 - -0.0 648,647 - -0.4 648,729 - CA264_02825 0.12 -1.2 648,791 - CA264_02825 0.21 -1.2 648,791 - CA264_02825 0.21 -1.5 648,791 - CA264_02825 0.21 -2.4 648,801 + CA264_02825 0.22 +0.2 648,802 - CA264_02825 0.22 -1.6 648,802 - CA264_02825 0.22 -2.0 648,805 + CA264_02825 0.23 -2.0 648,805 + CA264_02825 0.23 +0.2 648,805 + CA264_02825 0.23 -0.0 648,806 - CA264_02825 0.23 -1.6 648,806 - CA264_02825 0.23 -0.9 648,921 + CA264_02825 0.39 +0.3
Or see this region's nucleotide sequence