Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_02640

Experiment: m.b. Thallium(I) acetate 0.0025 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_02630 and CA264_02635 are separated by 69 nucleotidesCA264_02635 and CA264_02640 are separated by 214 nucleotidesCA264_02640 and CA264_02645 are separated by 522 nucleotides CA264_02630: CA264_02630 - carbonic anhydrase, at 609,381 to 610,022 _02630 CA264_02635: CA264_02635 - hypothetical protein, at 610,092 to 610,700 _02635 CA264_02640: CA264_02640 - SWFGD domain-containing protein, at 610,915 to 611,886 _02640 CA264_02645: CA264_02645 - hypothetical protein, at 612,409 to 612,795 _02645 Position (kb) 610 611 612Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 609.915 kb on + strand, within CA264_02630at 609.915 kb on + strand, within CA264_02630at 609.987 kb on + strandat 609.987 kb on + strandat 609.987 kb on + strandat 610.021 kb on - strandat 610.034 kb on - strandat 610.040 kb on - strandat 610.173 kb on + strand, within CA264_02635at 610.173 kb on + strand, within CA264_02635at 610.173 kb on + strand, within CA264_02635at 610.173 kb on + strand, within CA264_02635at 610.173 kb on + strand, within CA264_02635at 610.268 kb on + strand, within CA264_02635at 610.321 kb on - strand, within CA264_02635at 610.423 kb on + strand, within CA264_02635at 610.424 kb on - strand, within CA264_02635at 610.549 kb on - strand, within CA264_02635at 610.786 kb on - strandat 610.786 kb on - strandat 610.787 kb on + strandat 610.787 kb on + strandat 610.787 kb on + strandat 610.788 kb on - strandat 610.789 kb on + strandat 610.789 kb on + strandat 610.790 kb on - strandat 610.790 kb on - strandat 610.793 kb on + strandat 610.848 kb on + strandat 610.862 kb on + strandat 610.863 kb on - strandat 610.917 kb on - strandat 610.925 kb on + strandat 610.926 kb on - strandat 610.926 kb on - strandat 610.955 kb on + strandat 610.955 kb on + strandat 610.956 kb on - strandat 610.970 kb on + strandat 610.970 kb on + strandat 610.970 kb on + strandat 610.970 kb on + strandat 610.970 kb on + strandat 610.970 kb on + strandat 610.971 kb on - strandat 610.971 kb on - strandat 610.971 kb on - strandat 610.986 kb on + strandat 610.986 kb on + strandat 611.001 kb on - strandat 611.024 kb on + strand, within CA264_02640at 611.024 kb on + strand, within CA264_02640at 611.025 kb on - strand, within CA264_02640at 611.029 kb on - strand, within CA264_02640at 611.030 kb on + strand, within CA264_02640at 611.030 kb on + strand, within CA264_02640at 611.030 kb on + strand, within CA264_02640at 611.110 kb on - strand, within CA264_02640at 611.213 kb on + strand, within CA264_02640at 611.213 kb on + strand, within CA264_02640at 611.235 kb on - strand, within CA264_02640at 611.280 kb on - strand, within CA264_02640at 611.306 kb on + strand, within CA264_02640at 611.338 kb on - strand, within CA264_02640at 611.466 kb on - strand, within CA264_02640at 611.474 kb on + strand, within CA264_02640at 611.539 kb on + strand, within CA264_02640at 611.600 kb on + strand, within CA264_02640at 611.613 kb on - strand, within CA264_02640at 611.617 kb on - strand, within CA264_02640at 611.639 kb on + strand, within CA264_02640at 611.639 kb on + strand, within CA264_02640at 611.640 kb on - strand, within CA264_02640at 611.640 kb on - strand, within CA264_02640at 611.725 kb on - strand, within CA264_02640at 611.805 kb on - strandat 611.807 kb on + strandat 611.861 kb on + strandat 611.876 kb on + strandat 611.876 kb on + strandat 611.877 kb on - strandat 611.887 kb on - strandat 611.892 kb on - strandat 611.892 kb on - strandat 611.892 kb on - strandat 611.897 kb on + strandat 611.902 kb on + strandat 611.919 kb on + strandat 611.985 kb on + strandat 611.985 kb on + strandat 611.985 kb on + strandat 611.985 kb on + strandat 611.986 kb on - strandat 611.986 kb on - strandat 611.990 kb on + strandat 611.990 kb on + strandat 612.017 kb on + strandat 612.042 kb on + strandat 612.047 kb on + strandat 612.140 kb on - strandat 612.157 kb on + strandat 612.159 kb on + strandat 612.319 kb on - strandat 612.346 kb on + strandat 612.346 kb on + strandat 612.346 kb on + strandat 612.346 kb on + strandat 612.347 kb on - strandat 612.347 kb on - strandat 612.383 kb on - strandat 612.391 kb on - strandat 612.394 kb on - strandat 612.420 kb on + strandat 612.420 kb on + strandat 612.435 kb on + strandat 612.435 kb on + strandat 612.459 kb on - strand, within CA264_02645at 612.459 kb on - strand, within CA264_02645at 612.504 kb on - strand, within CA264_02645at 612.504 kb on - strand, within CA264_02645at 612.504 kb on - strand, within CA264_02645at 612.509 kb on + strand, within CA264_02645at 612.580 kb on - strand, within CA264_02645at 612.643 kb on - strand, within CA264_02645at 612.687 kb on + strand, within CA264_02645at 612.687 kb on + strand, within CA264_02645at 612.721 kb on + strand, within CA264_02645at 612.722 kb on - strand, within CA264_02645at 612.723 kb on + strand, within CA264_02645at 612.728 kb on + strand, within CA264_02645at 612.753 kb on + strand, within CA264_02645at 612.754 kb on - strand, within CA264_02645at 612.763 kb on - strandat 612.794 kb on - strandat 612.794 kb on - strandat 612.854 kb on + strandat 612.855 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.0025 mg/ml
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609,915 + CA264_02630 0.83 -0.1
609,915 + CA264_02630 0.83 -2.5
609,987 + -0.9
609,987 + -2.2
609,987 + +0.1
610,021 - +0.3
610,034 - +0.7
610,040 - +0.9
610,173 + CA264_02635 0.13 +0.0
610,173 + CA264_02635 0.13 -1.5
610,173 + CA264_02635 0.13 +0.1
610,173 + CA264_02635 0.13 -0.3
610,173 + CA264_02635 0.13 -0.8
610,268 + CA264_02635 0.29 +2.3
610,321 - CA264_02635 0.38 -1.2
610,423 + CA264_02635 0.54 +0.3
610,424 - CA264_02635 0.55 -1.7
610,549 - CA264_02635 0.75 -1.5
610,786 - -0.3
610,786 - -0.4
610,787 + -1.1
610,787 + -0.7
610,787 + -0.6
610,788 - +0.5
610,789 + -2.5
610,789 + -0.3
610,790 - -2.3
610,790 - -2.8
610,793 + -1.2
610,848 + -0.2
610,862 + -1.3
610,863 - -1.2
610,917 - +0.1
610,925 + -0.5
610,926 - -0.7
610,926 - -2.4
610,955 + -0.9
610,955 + -1.8
610,956 - -1.1
610,970 + -2.2
610,970 + +1.3
610,970 + -0.7
610,970 + -0.8
610,970 + +0.9
610,970 + -0.5
610,971 - -1.3
610,971 - -0.1
610,971 - -0.7
610,986 + -1.0
610,986 + -0.2
611,001 - -1.4
611,024 + CA264_02640 0.11 +0.2
611,024 + CA264_02640 0.11 +0.8
611,025 - CA264_02640 0.11 -3.0
611,029 - CA264_02640 0.12 -1.8
611,030 + CA264_02640 0.12 -0.6
611,030 + CA264_02640 0.12 -2.1
611,030 + CA264_02640 0.12 -0.3
611,110 - CA264_02640 0.20 -1.6
611,213 + CA264_02640 0.31 -0.1
611,213 + CA264_02640 0.31 -1.0
611,235 - CA264_02640 0.33 +0.5
611,280 - CA264_02640 0.38 -1.2
611,306 + CA264_02640 0.40 -1.7
611,338 - CA264_02640 0.44 -0.2
611,466 - CA264_02640 0.57 -1.5
611,474 + CA264_02640 0.58 +0.3
611,539 + CA264_02640 0.64 +0.1
611,600 + CA264_02640 0.70 -1.4
611,613 - CA264_02640 0.72 -2.8
611,617 - CA264_02640 0.72 -2.3
611,639 + CA264_02640 0.74 -1.1
611,639 + CA264_02640 0.74 -1.2
611,640 - CA264_02640 0.75 -3.9
611,640 - CA264_02640 0.75 -1.5
611,725 - CA264_02640 0.83 -1.9
611,805 - -1.3
611,807 + -1.7
611,861 + -2.4
611,876 + -0.9
611,876 + -1.4
611,877 - -0.4
611,887 - +0.2
611,892 - -0.7
611,892 - -2.4
611,892 - -0.7
611,897 + -1.5
611,902 + -1.7
611,919 + -1.0
611,985 + -1.2
611,985 + -1.6
611,985 + -0.7
611,985 + -0.5
611,986 - -1.8
611,986 - -0.8
611,990 + -1.3
611,990 + -1.3
612,017 + +1.7
612,042 + +0.9
612,047 + -3.2
612,140 - -1.2
612,157 + -3.0
612,159 + -0.5
612,319 - +0.7
612,346 + -0.3
612,346 + -1.0
612,346 + -1.2
612,346 + -1.0
612,347 - -0.6
612,347 - -2.2
612,383 - +0.4
612,391 - -0.8
612,394 - -0.1
612,420 + +0.8
612,420 + -1.1
612,435 + -0.3
612,435 + -0.3
612,459 - CA264_02645 0.13 +0.5
612,459 - CA264_02645 0.13 +2.0
612,504 - CA264_02645 0.25 +0.2
612,504 - CA264_02645 0.25 +1.2
612,504 - CA264_02645 0.25 -0.0
612,509 + CA264_02645 0.26 -0.9
612,580 - CA264_02645 0.44 +0.8
612,643 - CA264_02645 0.60 +0.9
612,687 + CA264_02645 0.72 -1.7
612,687 + CA264_02645 0.72 +0.3
612,721 + CA264_02645 0.81 +1.3
612,722 - CA264_02645 0.81 +0.2
612,723 + CA264_02645 0.81 -1.6
612,728 + CA264_02645 0.82 -1.1
612,753 + CA264_02645 0.89 -0.6
612,754 - CA264_02645 0.89 +0.2
612,763 - +0.4
612,794 - -0.2
612,794 - +0.3
612,854 + +1.3
612,855 - -2.4

Or see this region's nucleotide sequence