Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_00700

Experiment: m.b. Thallium(I) acetate 0.0025 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_00695 and CA264_00700 overlap by 1 nucleotidesCA264_00700 and CA264_00705 are separated by 142 nucleotidesCA264_00705 and CA264_00710 are separated by 69 nucleotides CA264_00695: CA264_00695 - cytochrome-c peroxidase, at 151,489 to 152,562 _00695 CA264_00700: CA264_00700 - hypothetical protein, at 152,562 to 153,335 _00700 CA264_00705: CA264_00705 - hypothetical protein, at 153,478 to 153,810 _00705 CA264_00710: CA264_00710 - hypothetical protein, at 153,880 to 154,635 _00710 Position (kb) 152 153 154Strain fitness (log2 ratio) -2 -1 0 1 2at 151.706 kb on + strand, within CA264_00695at 151.706 kb on + strand, within CA264_00695at 151.707 kb on - strand, within CA264_00695at 151.707 kb on - strand, within CA264_00695at 151.747 kb on - strand, within CA264_00695at 151.749 kb on - strand, within CA264_00695at 151.777 kb on - strand, within CA264_00695at 151.919 kb on - strand, within CA264_00695at 151.961 kb on + strand, within CA264_00695at 151.989 kb on + strand, within CA264_00695at 151.989 kb on + strand, within CA264_00695at 151.989 kb on + strand, within CA264_00695at 152.260 kb on + strand, within CA264_00695at 152.397 kb on + strand, within CA264_00695at 152.398 kb on - strand, within CA264_00695at 152.503 kb on - strandat 152.542 kb on + strandat 152.543 kb on - strandat 152.563 kb on + strandat 152.592 kb on + strandat 152.603 kb on - strandat 152.604 kb on - strandat 152.611 kb on + strandat 152.612 kb on - strandat 152.669 kb on + strand, within CA264_00700at 152.679 kb on + strand, within CA264_00700at 152.680 kb on - strand, within CA264_00700at 152.680 kb on - strand, within CA264_00700at 152.680 kb on - strand, within CA264_00700at 152.680 kb on - strand, within CA264_00700at 152.748 kb on + strand, within CA264_00700at 152.749 kb on - strand, within CA264_00700at 152.805 kb on + strand, within CA264_00700at 152.805 kb on + strand, within CA264_00700at 152.805 kb on + strand, within CA264_00700at 152.806 kb on - strand, within CA264_00700at 152.806 kb on - strand, within CA264_00700at 152.813 kb on - strand, within CA264_00700at 152.819 kb on - strand, within CA264_00700at 152.819 kb on - strand, within CA264_00700at 152.819 kb on - strand, within CA264_00700at 152.819 kb on - strand, within CA264_00700at 152.870 kb on + strand, within CA264_00700at 152.878 kb on + strand, within CA264_00700at 152.940 kb on + strand, within CA264_00700at 152.940 kb on + strand, within CA264_00700at 153.061 kb on + strand, within CA264_00700at 153.083 kb on - strand, within CA264_00700at 153.105 kb on - strand, within CA264_00700at 153.105 kb on - strand, within CA264_00700at 153.128 kb on - strand, within CA264_00700at 153.173 kb on - strand, within CA264_00700at 153.173 kb on - strand, within CA264_00700at 153.205 kb on + strand, within CA264_00700at 153.205 kb on + strand, within CA264_00700at 153.205 kb on + strand, within CA264_00700at 153.205 kb on + strand, within CA264_00700at 153.206 kb on - strand, within CA264_00700at 153.206 kb on - strand, within CA264_00700at 153.217 kb on - strand, within CA264_00700at 153.217 kb on - strand, within CA264_00700at 153.217 kb on - strand, within CA264_00700at 153.218 kb on + strand, within CA264_00700at 153.300 kb on + strandat 153.300 kb on + strandat 153.300 kb on + strandat 153.301 kb on - strandat 153.303 kb on + strandat 153.304 kb on - strandat 153.304 kb on - strandat 153.312 kb on + strandat 153.312 kb on + strandat 153.313 kb on - strandat 153.313 kb on - strandat 153.363 kb on + strandat 153.363 kb on + strandat 153.364 kb on - strandat 153.378 kb on - strandat 153.379 kb on + strandat 153.386 kb on + strandat 153.387 kb on - strandat 153.390 kb on + strandat 153.390 kb on + strandat 153.390 kb on + strandat 153.390 kb on + strandat 153.391 kb on - strandat 153.393 kb on - strandat 153.422 kb on - strandat 153.423 kb on + strandat 153.424 kb on - strandat 153.424 kb on - strandat 153.468 kb on + strandat 153.469 kb on - strandat 153.469 kb on - strandat 153.479 kb on + strandat 153.479 kb on + strandat 153.479 kb on + strandat 153.479 kb on + strandat 153.479 kb on + strandat 153.480 kb on - strandat 153.480 kb on - strandat 153.480 kb on - strandat 153.482 kb on - strandat 153.512 kb on + strand, within CA264_00705at 153.513 kb on - strand, within CA264_00705at 153.614 kb on + strand, within CA264_00705at 153.614 kb on + strand, within CA264_00705at 153.615 kb on - strand, within CA264_00705at 153.752 kb on + strand, within CA264_00705at 153.753 kb on - strand, within CA264_00705at 153.753 kb on - strand, within CA264_00705at 153.792 kb on + strandat 153.792 kb on + strandat 153.793 kb on - strandat 153.817 kb on + strandat 153.871 kb on + strandat 153.887 kb on - strandat 154.092 kb on - strand, within CA264_00710at 154.149 kb on - strand, within CA264_00710at 154.149 kb on - strand, within CA264_00710at 154.174 kb on - strand, within CA264_00710at 154.286 kb on + strand, within CA264_00710at 154.314 kb on + strand, within CA264_00710at 154.315 kb on - strand, within CA264_00710

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.0025 mg/ml
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151,706 + CA264_00695 0.20 -1.3
151,706 + CA264_00695 0.20 -2.4
151,707 - CA264_00695 0.20 -0.7
151,707 - CA264_00695 0.20 -1.1
151,747 - CA264_00695 0.24 -0.3
151,749 - CA264_00695 0.24 -0.2
151,777 - CA264_00695 0.27 -0.4
151,919 - CA264_00695 0.40 -0.3
151,961 + CA264_00695 0.44 -1.9
151,989 + CA264_00695 0.47 -1.1
151,989 + CA264_00695 0.47 -0.8
151,989 + CA264_00695 0.47 -1.3
152,260 + CA264_00695 0.72 -0.6
152,397 + CA264_00695 0.85 -1.7
152,398 - CA264_00695 0.85 -1.9
152,503 - -0.6
152,542 + -1.5
152,543 - +1.3
152,563 + -2.1
152,592 + -0.5
152,603 - -0.9
152,604 - +0.2
152,611 + -2.4
152,612 - -0.8
152,669 + CA264_00700 0.14 -1.7
152,679 + CA264_00700 0.15 -1.2
152,680 - CA264_00700 0.15 -0.3
152,680 - CA264_00700 0.15 -0.5
152,680 - CA264_00700 0.15 -0.4
152,680 - CA264_00700 0.15 +0.3
152,748 + CA264_00700 0.24 -1.2
152,749 - CA264_00700 0.24 -0.8
152,805 + CA264_00700 0.31 -1.0
152,805 + CA264_00700 0.31 -1.3
152,805 + CA264_00700 0.31 -0.8
152,806 - CA264_00700 0.32 -1.1
152,806 - CA264_00700 0.32 -0.6
152,813 - CA264_00700 0.32 -0.6
152,819 - CA264_00700 0.33 -0.1
152,819 - CA264_00700 0.33 +0.5
152,819 - CA264_00700 0.33 +2.3
152,819 - CA264_00700 0.33 -0.9
152,870 + CA264_00700 0.40 -1.6
152,878 + CA264_00700 0.41 -1.1
152,940 + CA264_00700 0.49 -1.3
152,940 + CA264_00700 0.49 -1.8
153,061 + CA264_00700 0.64 +0.1
153,083 - CA264_00700 0.67 -1.2
153,105 - CA264_00700 0.70 -0.7
153,105 - CA264_00700 0.70 -0.7
153,128 - CA264_00700 0.73 +0.1
153,173 - CA264_00700 0.79 +0.4
153,173 - CA264_00700 0.79 -0.9
153,205 + CA264_00700 0.83 -0.1
153,205 + CA264_00700 0.83 +1.2
153,205 + CA264_00700 0.83 +0.3
153,205 + CA264_00700 0.83 -0.8
153,206 - CA264_00700 0.83 -0.0
153,206 - CA264_00700 0.83 -0.7
153,217 - CA264_00700 0.85 -2.1
153,217 - CA264_00700 0.85 -2.2
153,217 - CA264_00700 0.85 -1.8
153,218 + CA264_00700 0.85 -1.6
153,300 + -0.6
153,300 + -0.9
153,300 + -0.6
153,301 - -1.5
153,303 + +0.3
153,304 - +1.3
153,304 - -1.5
153,312 + -0.9
153,312 + -1.8
153,313 - +0.8
153,313 - -0.2
153,363 + +1.7
153,363 + +0.7
153,364 - +0.3
153,378 - +1.3
153,379 + -0.4
153,386 + -2.0
153,387 - +0.4
153,390 + +0.2
153,390 + -1.8
153,390 + -0.5
153,390 + -0.1
153,391 - -0.0
153,393 - +0.2
153,422 - -0.1
153,423 + -0.3
153,424 - -0.3
153,424 - -0.4
153,468 + +0.2
153,469 - +0.4
153,469 - -0.4
153,479 + -1.4
153,479 + -1.3
153,479 + -0.2
153,479 + -0.8
153,479 + -1.6
153,480 - +1.0
153,480 - +0.1
153,480 - +2.7
153,482 - +1.3
153,512 + CA264_00705 0.10 -1.9
153,513 - CA264_00705 0.11 -1.1
153,614 + CA264_00705 0.41 -0.9
153,614 + CA264_00705 0.41 -2.5
153,615 - CA264_00705 0.41 +1.7
153,752 + CA264_00705 0.82 -0.7
153,753 - CA264_00705 0.83 +2.1
153,753 - CA264_00705 0.83 +0.0
153,792 + -1.1
153,792 + -0.7
153,793 - +1.0
153,817 + -0.6
153,871 + -0.3
153,887 - -0.5
154,092 - CA264_00710 0.28 +0.6
154,149 - CA264_00710 0.36 -0.8
154,149 - CA264_00710 0.36 -0.3
154,174 - CA264_00710 0.39 -0.4
154,286 + CA264_00710 0.54 -1.9
154,314 + CA264_00710 0.57 -1.0
154,315 - CA264_00710 0.58 -0.3

Or see this region's nucleotide sequence