Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_00690

Experiment: m.b. Thallium(I) acetate 0.0025 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_00680 and CA264_00685 are separated by 140 nucleotidesCA264_00685 and CA264_00690 are separated by 55 nucleotidesCA264_00690 and CA264_00695 are separated by 1 nucleotides CA264_00680: CA264_00680 - alpha/beta hydrolase, at 148,908 to 149,861 _00680 CA264_00685: CA264_00685 - hypothetical protein, at 150,002 to 150,430 _00685 CA264_00690: CA264_00690 - hypothetical protein, at 150,486 to 151,487 _00690 CA264_00695: CA264_00695 - cytochrome-c peroxidase, at 151,489 to 152,562 _00695 Position (kb) 150 151 152Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 149.579 kb on - strand, within CA264_00680at 149.634 kb on - strand, within CA264_00680at 149.636 kb on + strand, within CA264_00680at 149.637 kb on - strand, within CA264_00680at 149.637 kb on - strand, within CA264_00680at 149.638 kb on + strand, within CA264_00680at 149.824 kb on + strandat 149.867 kb on - strandat 149.883 kb on - strandat 149.959 kb on - strandat 149.996 kb on - strandat 150.001 kb on + strandat 150.002 kb on - strandat 150.031 kb on - strandat 150.053 kb on - strand, within CA264_00685at 150.058 kb on + strand, within CA264_00685at 150.058 kb on + strand, within CA264_00685at 150.161 kb on + strand, within CA264_00685at 150.162 kb on - strand, within CA264_00685at 150.248 kb on + strand, within CA264_00685at 150.357 kb on + strand, within CA264_00685at 150.378 kb on + strand, within CA264_00685at 150.379 kb on - strand, within CA264_00685at 150.379 kb on - strand, within CA264_00685at 150.379 kb on - strand, within CA264_00685at 150.379 kb on - strand, within CA264_00685at 150.393 kb on + strandat 150.394 kb on - strandat 150.394 kb on - strandat 150.425 kb on - strandat 150.429 kb on - strandat 150.429 kb on - strandat 150.465 kb on + strandat 150.508 kb on - strandat 150.571 kb on + strandat 150.692 kb on - strand, within CA264_00690at 150.695 kb on - strand, within CA264_00690at 150.760 kb on + strand, within CA264_00690at 150.765 kb on - strand, within CA264_00690at 150.822 kb on - strand, within CA264_00690at 150.862 kb on + strand, within CA264_00690at 150.867 kb on + strand, within CA264_00690at 150.868 kb on - strand, within CA264_00690at 150.881 kb on - strand, within CA264_00690at 150.881 kb on - strand, within CA264_00690at 150.968 kb on + strand, within CA264_00690at 150.969 kb on - strand, within CA264_00690at 150.969 kb on - strand, within CA264_00690at 151.014 kb on - strand, within CA264_00690at 151.019 kb on + strand, within CA264_00690at 151.115 kb on - strand, within CA264_00690at 151.117 kb on + strand, within CA264_00690at 151.118 kb on - strand, within CA264_00690at 151.158 kb on + strand, within CA264_00690at 151.381 kb on + strand, within CA264_00690at 151.382 kb on - strand, within CA264_00690at 151.438 kb on - strandat 151.522 kb on - strandat 151.522 kb on - strandat 151.538 kb on - strandat 151.706 kb on + strand, within CA264_00695at 151.706 kb on + strand, within CA264_00695at 151.707 kb on - strand, within CA264_00695at 151.707 kb on - strand, within CA264_00695at 151.747 kb on - strand, within CA264_00695at 151.749 kb on - strand, within CA264_00695at 151.777 kb on - strand, within CA264_00695at 151.919 kb on - strand, within CA264_00695at 151.961 kb on + strand, within CA264_00695at 151.989 kb on + strand, within CA264_00695at 151.989 kb on + strand, within CA264_00695at 151.989 kb on + strand, within CA264_00695at 152.260 kb on + strand, within CA264_00695at 152.397 kb on + strand, within CA264_00695at 152.398 kb on - strand, within CA264_00695

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.0025 mg/ml
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149,579 - CA264_00680 0.70 -0.2
149,634 - CA264_00680 0.76 -2.5
149,636 + CA264_00680 0.76 -1.3
149,637 - CA264_00680 0.76 +0.3
149,637 - CA264_00680 0.76 -0.5
149,638 + CA264_00680 0.77 +0.7
149,824 + -1.7
149,867 - +0.8
149,883 - +0.3
149,959 - +0.2
149,996 - +0.9
150,001 + -0.1
150,002 - +0.7
150,031 - +1.8
150,053 - CA264_00685 0.12 -1.1
150,058 + CA264_00685 0.13 -1.8
150,058 + CA264_00685 0.13 -1.8
150,161 + CA264_00685 0.37 -1.1
150,162 - CA264_00685 0.37 -1.7
150,248 + CA264_00685 0.57 -1.1
150,357 + CA264_00685 0.83 -1.4
150,378 + CA264_00685 0.88 -2.6
150,379 - CA264_00685 0.88 +0.5
150,379 - CA264_00685 0.88 +0.3
150,379 - CA264_00685 0.88 -0.4
150,379 - CA264_00685 0.88 +0.3
150,393 + -2.2
150,394 - +0.7
150,394 - -0.3
150,425 - +0.7
150,429 - +0.7
150,429 - +0.8
150,465 + -2.0
150,508 - -1.6
150,571 + -1.7
150,692 - CA264_00690 0.21 -2.6
150,695 - CA264_00690 0.21 -1.6
150,760 + CA264_00690 0.27 -0.4
150,765 - CA264_00690 0.28 -1.0
150,822 - CA264_00690 0.34 -2.7
150,862 + CA264_00690 0.38 -0.5
150,867 + CA264_00690 0.38 +0.5
150,868 - CA264_00690 0.38 -0.6
150,881 - CA264_00690 0.39 -2.3
150,881 - CA264_00690 0.39 -0.4
150,968 + CA264_00690 0.48 -1.9
150,969 - CA264_00690 0.48 -1.6
150,969 - CA264_00690 0.48 -3.6
151,014 - CA264_00690 0.53 -0.0
151,019 + CA264_00690 0.53 +0.3
151,115 - CA264_00690 0.63 -1.4
151,117 + CA264_00690 0.63 -1.4
151,118 - CA264_00690 0.63 -1.4
151,158 + CA264_00690 0.67 -1.2
151,381 + CA264_00690 0.89 -0.4
151,382 - CA264_00690 0.89 -1.9
151,438 - -0.4
151,522 - -0.5
151,522 - -0.4
151,538 - -0.2
151,706 + CA264_00695 0.20 -1.3
151,706 + CA264_00695 0.20 -2.4
151,707 - CA264_00695 0.20 -0.7
151,707 - CA264_00695 0.20 -1.1
151,747 - CA264_00695 0.24 -0.3
151,749 - CA264_00695 0.24 -0.2
151,777 - CA264_00695 0.27 -0.4
151,919 - CA264_00695 0.40 -0.3
151,961 + CA264_00695 0.44 -1.9
151,989 + CA264_00695 0.47 -1.1
151,989 + CA264_00695 0.47 -0.8
151,989 + CA264_00695 0.47 -1.3
152,260 + CA264_00695 0.72 -0.6
152,397 + CA264_00695 0.85 -1.7
152,398 - CA264_00695 0.85 -1.9

Or see this region's nucleotide sequence