Experiment: L-Malic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS08100 and ABID97_RS08105 overlap by 4 nucleotides ABID97_RS08105 and ABID97_RS08110 are separated by 31 nucleotides ABID97_RS08110 and ABID97_RS08115 are separated by 118 nucleotides
ABID97_RS08100: ABID97_RS08100 - ABC transporter permease, at 1,698,826 to 1,699,668
_RS08100
ABID97_RS08105: ABID97_RS08105 - ATP-binding cassette domain-containing protein, at 1,699,665 to 1,700,507
_RS08105
ABID97_RS08110: ABID97_RS08110 - putative selenate ABC transporter substrate-binding protein, at 1,700,539 to 1,701,396
_RS08110
ABID97_RS08115: ABID97_RS08115 - selenide, water dikinase SelD, at 1,701,515 to 1,702,603
_RS08115
Position (kb) 1700
1701
1702 Strain fitness (log2 ratio) -1
0
1 at 1699.781 kb on - strand, within ABID97_RS08105 at 1700.023 kb on + strand, within ABID97_RS08105 at 1700.024 kb on - strand, within ABID97_RS08105 at 1700.586 kb on - strand at 1700.736 kb on - strand, within ABID97_RS08110 at 1700.741 kb on + strand, within ABID97_RS08110 at 1700.741 kb on + strand, within ABID97_RS08110 at 1700.742 kb on - strand, within ABID97_RS08110 at 1700.744 kb on + strand, within ABID97_RS08110 at 1700.745 kb on - strand, within ABID97_RS08110 at 1700.745 kb on - strand, within ABID97_RS08110 at 1700.945 kb on + strand, within ABID97_RS08110 at 1701.197 kb on + strand, within ABID97_RS08110 at 1701.248 kb on + strand, within ABID97_RS08110 at 1701.830 kb on + strand, within ABID97_RS08115 at 1701.830 kb on + strand, within ABID97_RS08115 at 1701.830 kb on + strand, within ABID97_RS08115 at 1701.998 kb on + strand, within ABID97_RS08115 at 1701.998 kb on + strand, within ABID97_RS08115 at 1701.999 kb on - strand, within ABID97_RS08115
Per-strain Table
Position Strand Gene LocusTag Fraction L-Malic (C) remove 1,699,781 - ABID97_RS08105 0.14 -0.2 1,700,023 + ABID97_RS08105 0.42 -0.5 1,700,024 - ABID97_RS08105 0.43 -0.3 1,700,586 - +0.3 1,700,736 - ABID97_RS08110 0.23 -0.5 1,700,741 + ABID97_RS08110 0.24 -0.3 1,700,741 + ABID97_RS08110 0.24 -0.5 1,700,742 - ABID97_RS08110 0.24 +1.5 1,700,744 + ABID97_RS08110 0.24 -0.4 1,700,745 - ABID97_RS08110 0.24 +0.2 1,700,745 - ABID97_RS08110 0.24 -0.0 1,700,945 + ABID97_RS08110 0.47 -0.0 1,701,197 + ABID97_RS08110 0.77 -1.2 1,701,248 + ABID97_RS08110 0.83 -1.5 1,701,830 + ABID97_RS08115 0.29 +0.0 1,701,830 + ABID97_RS08115 0.29 +0.1 1,701,830 + ABID97_RS08115 0.29 -0.4 1,701,998 + ABID97_RS08115 0.44 -0.1 1,701,998 + ABID97_RS08115 0.44 -0.1 1,701,999 - ABID97_RS08115 0.44 +0.0
Or see this region's nucleotide sequence