Experiment: L-Malic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS02600 and ABID97_RS02605 are separated by 127 nucleotides ABID97_RS02605 and ABID97_RS02610 are separated by 455 nucleotides
ABID97_RS02600: ABID97_RS02600 - homoserine O-acetyltransferase, at 531,293 to 532,471
_RS02600
ABID97_RS02605: ABID97_RS02605 - TMEM165/GDT1 family protein, at 532,599 to 533,162
_RS02605
ABID97_RS02610: ABID97_RS02610 - RNA-binding protein, at 533,618 to 534,244
_RS02610
Position (kb) 532
533
534 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 531.609 kb on + strand, within ABID97_RS02600 at 531.609 kb on + strand, within ABID97_RS02600 at 531.609 kb on + strand, within ABID97_RS02600 at 531.609 kb on + strand, within ABID97_RS02600 at 531.609 kb on + strand, within ABID97_RS02600 at 531.610 kb on - strand, within ABID97_RS02600 at 531.610 kb on - strand, within ABID97_RS02600 at 531.610 kb on - strand, within ABID97_RS02600 at 531.627 kb on + strand, within ABID97_RS02600 at 531.628 kb on - strand, within ABID97_RS02600 at 531.628 kb on - strand, within ABID97_RS02600 at 531.660 kb on + strand, within ABID97_RS02600 at 531.783 kb on + strand, within ABID97_RS02600 at 531.784 kb on - strand, within ABID97_RS02600 at 531.784 kb on - strand, within ABID97_RS02600 at 531.784 kb on - strand, within ABID97_RS02600 at 531.784 kb on - strand, within ABID97_RS02600 at 531.847 kb on - strand, within ABID97_RS02600 at 531.847 kb on - strand, within ABID97_RS02600 at 531.975 kb on + strand, within ABID97_RS02600 at 532.120 kb on - strand, within ABID97_RS02600 at 532.120 kb on - strand, within ABID97_RS02600 at 532.120 kb on - strand, within ABID97_RS02600 at 532.278 kb on + strand, within ABID97_RS02600 at 532.278 kb on + strand, within ABID97_RS02600 at 532.278 kb on + strand, within ABID97_RS02600 at 532.278 kb on + strand, within ABID97_RS02600 at 532.279 kb on - strand, within ABID97_RS02600 at 532.279 kb on - strand, within ABID97_RS02600 at 532.279 kb on - strand, within ABID97_RS02600 at 532.279 kb on - strand, within ABID97_RS02600 at 532.359 kb on + strand at 532.359 kb on + strand at 532.360 kb on - strand at 532.381 kb on - strand at 532.381 kb on - strand at 532.381 kb on - strand at 532.530 kb on + strand at 532.530 kb on + strand at 532.540 kb on + strand at 532.540 kb on + strand at 532.541 kb on - strand at 532.541 kb on - strand at 532.542 kb on + strand at 532.542 kb on + strand at 532.542 kb on + strand at 532.543 kb on - strand at 532.543 kb on - strand at 532.561 kb on - strand at 532.583 kb on + strand at 532.583 kb on + strand at 532.583 kb on + strand at 532.583 kb on + strand at 532.583 kb on + strand at 532.583 kb on + strand at 532.583 kb on + strand at 532.583 kb on + strand at 532.583 kb on + strand at 532.583 kb on + strand at 532.584 kb on - strand at 532.584 kb on - strand at 532.584 kb on - strand at 532.584 kb on - strand at 532.584 kb on - strand at 532.584 kb on - strand at 532.584 kb on - strand at 532.584 kb on - strand at 532.584 kb on - strand at 532.584 kb on - strand at 532.584 kb on - strand at 532.584 kb on - strand at 532.584 kb on - strand at 532.584 kb on - strand at 532.585 kb on + strand at 532.585 kb on + strand at 532.585 kb on + strand at 532.585 kb on + strand at 532.586 kb on - strand at 532.586 kb on - strand at 532.600 kb on + strand at 532.762 kb on + strand, within ABID97_RS02605 at 532.762 kb on + strand, within ABID97_RS02605 at 532.763 kb on - strand, within ABID97_RS02605 at 532.763 kb on - strand, within ABID97_RS02605 at 532.763 kb on - strand, within ABID97_RS02605 at 532.763 kb on - strand, within ABID97_RS02605 at 532.763 kb on - strand, within ABID97_RS02605 at 532.763 kb on - strand, within ABID97_RS02605 at 532.864 kb on + strand, within ABID97_RS02605 at 532.864 kb on + strand, within ABID97_RS02605 at 532.865 kb on - strand, within ABID97_RS02605 at 532.865 kb on - strand, within ABID97_RS02605 at 532.990 kb on + strand, within ABID97_RS02605 at 532.990 kb on + strand, within ABID97_RS02605 at 532.990 kb on + strand, within ABID97_RS02605 at 532.990 kb on + strand, within ABID97_RS02605 at 532.990 kb on + strand, within ABID97_RS02605 at 532.990 kb on + strand, within ABID97_RS02605 at 532.990 kb on + strand, within ABID97_RS02605 at 532.990 kb on + strand, within ABID97_RS02605 at 532.990 kb on + strand, within ABID97_RS02605 at 532.990 kb on + strand, within ABID97_RS02605 at 532.990 kb on + strand, within ABID97_RS02605 at 532.990 kb on + strand, within ABID97_RS02605 at 532.990 kb on + strand, within ABID97_RS02605 at 532.990 kb on + strand, within ABID97_RS02605 at 532.990 kb on + strand, within ABID97_RS02605 at 532.991 kb on - strand, within ABID97_RS02605 at 532.991 kb on - strand, within ABID97_RS02605 at 532.991 kb on - strand, within ABID97_RS02605 at 532.991 kb on - strand, within ABID97_RS02605 at 532.991 kb on - strand, within ABID97_RS02605 at 532.991 kb on - strand, within ABID97_RS02605 at 532.991 kb on - strand, within ABID97_RS02605 at 533.221 kb on + strand at 533.336 kb on + strand at 533.336 kb on + strand at 533.337 kb on - strand at 533.361 kb on + strand at 533.361 kb on + strand at 533.361 kb on + strand at 533.362 kb on - strand at 533.362 kb on - strand at 533.362 kb on - strand at 533.362 kb on - strand at 533.362 kb on - strand at 533.362 kb on - strand at 533.362 kb on - strand at 533.362 kb on - strand at 533.432 kb on - strand at 533.466 kb on + strand at 533.467 kb on - strand at 533.477 kb on + strand at 533.477 kb on + strand at 533.478 kb on - strand at 533.478 kb on - strand at 533.553 kb on + strand at 533.553 kb on + strand at 533.553 kb on + strand at 533.553 kb on + strand at 533.553 kb on + strand at 533.554 kb on - strand at 533.554 kb on - strand at 533.554 kb on - strand at 533.554 kb on - strand at 533.554 kb on - strand at 533.595 kb on + strand at 533.595 kb on + strand at 533.595 kb on + strand at 533.595 kb on + strand at 533.595 kb on + strand at 533.595 kb on + strand at 533.595 kb on + strand at 533.595 kb on + strand at 533.595 kb on + strand at 533.595 kb on + strand at 533.595 kb on + strand at 533.596 kb on - strand at 533.596 kb on - strand at 533.596 kb on - strand at 533.596 kb on - strand at 533.596 kb on - strand at 533.596 kb on - strand at 533.596 kb on - strand at 533.596 kb on - strand at 533.603 kb on + strand at 533.603 kb on + strand at 533.604 kb on - strand at 533.604 kb on - strand at 533.604 kb on - strand at 533.604 kb on - strand at 533.604 kb on - strand at 533.604 kb on - strand at 533.604 kb on - strand at 533.604 kb on - strand at 533.605 kb on + strand at 533.605 kb on + strand at 533.605 kb on + strand at 533.606 kb on - strand at 533.606 kb on - strand at 533.606 kb on - strand at 533.606 kb on - strand at 533.606 kb on - strand at 533.606 kb on - strand at 533.633 kb on + strand at 533.633 kb on + strand at 533.633 kb on + strand at 533.633 kb on + strand at 533.633 kb on + strand at 533.633 kb on + strand at 533.634 kb on - strand at 533.634 kb on - strand at 533.651 kb on + strand at 533.652 kb on - strand at 533.652 kb on - strand at 533.913 kb on - strand, within ABID97_RS02610 at 533.913 kb on - strand, within ABID97_RS02610 at 533.913 kb on - strand, within ABID97_RS02610 at 533.937 kb on - strand, within ABID97_RS02610 at 533.997 kb on - strand, within ABID97_RS02610 at 534.098 kb on + strand, within ABID97_RS02610
Per-strain Table
Position Strand Gene LocusTag Fraction L-Malic (C) remove 531,609 + ABID97_RS02600 0.27 -3.4 531,609 + ABID97_RS02600 0.27 -0.6 531,609 + ABID97_RS02600 0.27 -1.6 531,609 + ABID97_RS02600 0.27 -2.0 531,609 + ABID97_RS02600 0.27 -0.3 531,610 - ABID97_RS02600 0.27 -2.7 531,610 - ABID97_RS02600 0.27 -1.1 531,610 - ABID97_RS02600 0.27 -0.4 531,627 + ABID97_RS02600 0.28 +0.1 531,628 - ABID97_RS02600 0.28 -1.9 531,628 - ABID97_RS02600 0.28 -2.3 531,660 + ABID97_RS02600 0.31 -1.3 531,783 + ABID97_RS02600 0.42 -2.6 531,784 - ABID97_RS02600 0.42 -2.4 531,784 - ABID97_RS02600 0.42 -0.9 531,784 - ABID97_RS02600 0.42 -1.1 531,784 - ABID97_RS02600 0.42 -0.6 531,847 - ABID97_RS02600 0.47 -2.4 531,847 - ABID97_RS02600 0.47 -2.5 531,975 + ABID97_RS02600 0.58 -1.3 532,120 - ABID97_RS02600 0.70 -2.0 532,120 - ABID97_RS02600 0.70 -0.3 532,120 - ABID97_RS02600 0.70 -0.9 532,278 + ABID97_RS02600 0.84 -1.4 532,278 + ABID97_RS02600 0.84 -2.2 532,278 + ABID97_RS02600 0.84 +0.1 532,278 + ABID97_RS02600 0.84 -1.9 532,279 - ABID97_RS02600 0.84 -2.0 532,279 - ABID97_RS02600 0.84 -3.5 532,279 - ABID97_RS02600 0.84 -2.7 532,279 - ABID97_RS02600 0.84 -0.9 532,359 + -3.3 532,359 + -2.0 532,360 - -2.0 532,381 - -1.4 532,381 - -0.3 532,381 - -1.1 532,530 + -3.2 532,530 + -2.1 532,540 + +0.3 532,540 + -0.0 532,541 - +0.1 532,541 - +0.1 532,542 + +0.0 532,542 + +0.7 532,542 + -1.4 532,543 - +0.3 532,543 - -1.9 532,561 - +0.5 532,583 + -2.7 532,583 + -1.0 532,583 + +0.1 532,583 + -1.2 532,583 + -0.4 532,583 + +1.4 532,583 + -1.1 532,583 + -2.1 532,583 + -0.7 532,583 + -0.9 532,584 - -0.4 532,584 - +0.5 532,584 - +0.3 532,584 - -0.1 532,584 - +0.2 532,584 - -0.0 532,584 - +1.3 532,584 - +0.6 532,584 - +0.9 532,584 - +0.4 532,584 - +0.3 532,584 - +0.1 532,584 - -0.2 532,584 - +0.2 532,585 + +0.3 532,585 + +0.3 532,585 + +0.7 532,585 + +1.4 532,586 - -0.1 532,586 - +0.1 532,600 + -1.4 532,762 + ABID97_RS02605 0.29 -0.9 532,762 + ABID97_RS02605 0.29 -0.9 532,763 - ABID97_RS02605 0.29 -1.6 532,763 - ABID97_RS02605 0.29 -1.6 532,763 - ABID97_RS02605 0.29 +0.6 532,763 - ABID97_RS02605 0.29 -2.0 532,763 - ABID97_RS02605 0.29 -1.1 532,763 - ABID97_RS02605 0.29 -2.2 532,864 + ABID97_RS02605 0.47 +0.3 532,864 + ABID97_RS02605 0.47 -0.7 532,865 - ABID97_RS02605 0.47 -0.9 532,865 - ABID97_RS02605 0.47 -0.9 532,990 + ABID97_RS02605 0.69 -1.2 532,990 + ABID97_RS02605 0.69 -2.0 532,990 + ABID97_RS02605 0.69 -2.6 532,990 + ABID97_RS02605 0.69 -0.3 532,990 + ABID97_RS02605 0.69 -1.2 532,990 + ABID97_RS02605 0.69 -1.1 532,990 + ABID97_RS02605 0.69 -1.1 532,990 + ABID97_RS02605 0.69 -1.6 532,990 + ABID97_RS02605 0.69 -2.2 532,990 + ABID97_RS02605 0.69 -1.3 532,990 + ABID97_RS02605 0.69 -1.8 532,990 + ABID97_RS02605 0.69 -1.7 532,990 + ABID97_RS02605 0.69 -2.0 532,990 + ABID97_RS02605 0.69 -1.1 532,990 + ABID97_RS02605 0.69 +0.4 532,991 - ABID97_RS02605 0.70 -2.0 532,991 - ABID97_RS02605 0.70 -0.8 532,991 - ABID97_RS02605 0.70 -0.3 532,991 - ABID97_RS02605 0.70 -1.8 532,991 - ABID97_RS02605 0.70 -0.8 532,991 - ABID97_RS02605 0.70 -2.1 532,991 - ABID97_RS02605 0.70 -1.3 533,221 + -0.4 533,336 + +0.4 533,336 + -0.2 533,337 - +0.0 533,361 + -0.2 533,361 + -1.1 533,361 + +0.1 533,362 - -0.3 533,362 - -0.7 533,362 - -0.5 533,362 - -0.3 533,362 - +0.3 533,362 - -0.3 533,362 - +0.0 533,362 - -0.3 533,432 - +0.1 533,466 + +0.7 533,467 - +1.0 533,477 + +0.6 533,477 + +0.4 533,478 - +0.9 533,478 - +0.7 533,553 + +1.6 533,553 + +0.6 533,553 + +1.0 533,553 + +1.4 533,553 + +0.9 533,554 - +0.9 533,554 - +0.8 533,554 - +0.4 533,554 - +0.7 533,554 - +0.6 533,595 + -0.2 533,595 + +1.1 533,595 + +0.5 533,595 + +1.0 533,595 + +1.3 533,595 + +1.0 533,595 + -0.9 533,595 + +0.7 533,595 + +1.2 533,595 + +1.9 533,595 + +1.4 533,596 - +1.2 533,596 - +0.5 533,596 - +0.2 533,596 - +1.0 533,596 - +0.4 533,596 - +1.7 533,596 - +1.0 533,596 - +1.2 533,603 + +1.0 533,603 + +1.1 533,604 - +0.8 533,604 - +0.8 533,604 - +0.9 533,604 - +2.2 533,604 - +1.6 533,604 - +1.0 533,604 - +1.0 533,604 - +0.9 533,605 + +2.0 533,605 + +0.7 533,605 + +1.2 533,606 - +1.0 533,606 - -0.3 533,606 - +0.8 533,606 - +1.1 533,606 - +0.8 533,606 - +1.0 533,633 + +1.0 533,633 + +1.2 533,633 + +1.6 533,633 + +1.0 533,633 + +1.1 533,633 + +0.9 533,634 - +0.4 533,634 - +1.3 533,651 + +0.5 533,652 - +1.1 533,652 - +0.9 533,913 - ABID97_RS02610 0.47 -1.3 533,913 - ABID97_RS02610 0.47 +1.2 533,913 - ABID97_RS02610 0.47 +0.8 533,937 - ABID97_RS02610 0.51 +0.5 533,997 - ABID97_RS02610 0.60 -0.4 534,098 + ABID97_RS02610 0.77 +1.4
Or see this region's nucleotide sequence