Experiment: L-Malic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS01735 and ABID97_RS01740 are separated by 64 nucleotides ABID97_RS01740 and ABID97_RS01745 are separated by 57 nucleotides ABID97_RS01745 and ABID97_RS01750 are separated by 146 nucleotides
ABID97_RS01735: ABID97_RS01735 - class II fructose-bisphosphate aldolase, at 340,020 to 341,084
_RS01735
ABID97_RS01740: ABID97_RS01740 - alpha/beta hydrolase, at 341,149 to 342,087
_RS01740
ABID97_RS01745: ABID97_RS01745 - Lrp/AsnC family transcriptional regulator, at 342,145 to 342,651
_RS01745
ABID97_RS01750: ABID97_RS01750 - 1-aminocyclopropane-1-carboxylate deaminase, at 342,798 to 343,814
_RS01750
Position (kb) 341
342
343 Strain fitness (log2 ratio) -1
0
1 at 341.499 kb on - strand, within ABID97_RS01740 at 341.594 kb on + strand, within ABID97_RS01740 at 341.594 kb on + strand, within ABID97_RS01740 at 341.595 kb on - strand, within ABID97_RS01740 at 341.621 kb on + strand, within ABID97_RS01740 at 341.621 kb on + strand, within ABID97_RS01740 at 341.621 kb on + strand, within ABID97_RS01740 at 341.621 kb on + strand, within ABID97_RS01740 at 341.622 kb on - strand, within ABID97_RS01740 at 341.622 kb on - strand, within ABID97_RS01740 at 341.622 kb on - strand, within ABID97_RS01740 at 341.622 kb on - strand, within ABID97_RS01740 at 341.622 kb on - strand, within ABID97_RS01740 at 341.708 kb on + strand, within ABID97_RS01740 at 341.732 kb on + strand, within ABID97_RS01740 at 341.885 kb on + strand, within ABID97_RS01740 at 341.942 kb on + strand, within ABID97_RS01740 at 341.942 kb on + strand, within ABID97_RS01740 at 341.943 kb on - strand, within ABID97_RS01740 at 341.943 kb on - strand, within ABID97_RS01740 at 341.943 kb on - strand, within ABID97_RS01740 at 342.069 kb on + strand at 342.076 kb on - strand at 342.096 kb on + strand at 342.096 kb on + strand at 342.096 kb on + strand at 342.097 kb on - strand at 342.221 kb on + strand, within ABID97_RS01745 at 342.222 kb on - strand, within ABID97_RS01745 at 342.222 kb on - strand, within ABID97_RS01745 at 342.222 kb on - strand, within ABID97_RS01745 at 342.287 kb on + strand, within ABID97_RS01745 at 342.288 kb on - strand, within ABID97_RS01745 at 342.753 kb on - strand at 342.966 kb on + strand, within ABID97_RS01750 at 342.966 kb on + strand, within ABID97_RS01750 at 342.967 kb on - strand, within ABID97_RS01750
Per-strain Table
Position Strand Gene LocusTag Fraction L-Malic (C) remove 341,499 - ABID97_RS01740 0.37 -0.5 341,594 + ABID97_RS01740 0.47 -0.1 341,594 + ABID97_RS01740 0.47 -0.5 341,595 - ABID97_RS01740 0.47 -0.6 341,621 + ABID97_RS01740 0.50 -0.0 341,621 + ABID97_RS01740 0.50 +1.1 341,621 + ABID97_RS01740 0.50 +0.3 341,621 + ABID97_RS01740 0.50 -0.6 341,622 - ABID97_RS01740 0.50 -0.0 341,622 - ABID97_RS01740 0.50 -0.0 341,622 - ABID97_RS01740 0.50 +0.0 341,622 - ABID97_RS01740 0.50 -0.8 341,622 - ABID97_RS01740 0.50 -0.3 341,708 + ABID97_RS01740 0.60 +0.3 341,732 + ABID97_RS01740 0.62 +0.7 341,885 + ABID97_RS01740 0.78 +0.3 341,942 + ABID97_RS01740 0.84 +0.4 341,942 + ABID97_RS01740 0.84 +0.2 341,943 - ABID97_RS01740 0.85 +0.8 341,943 - ABID97_RS01740 0.85 -0.5 341,943 - ABID97_RS01740 0.85 +0.8 342,069 + +0.1 342,076 - -0.1 342,096 + -0.4 342,096 + +0.7 342,096 + -0.0 342,097 - +0.2 342,221 + ABID97_RS01745 0.15 -0.3 342,222 - ABID97_RS01745 0.15 +0.1 342,222 - ABID97_RS01745 0.15 -1.5 342,222 - ABID97_RS01745 0.15 +0.9 342,287 + ABID97_RS01745 0.28 +0.3 342,288 - ABID97_RS01745 0.28 +0.1 342,753 - +0.1 342,966 + ABID97_RS01750 0.17 -0.2 342,966 + ABID97_RS01750 0.17 +0.1 342,967 - ABID97_RS01750 0.17 -0.2
Or see this region's nucleotide sequence