Experiment: L-Malic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS01420 and ABID97_RS01425 are separated by 116 nucleotides ABID97_RS01425 and ABID97_RS01430 are separated by 1 nucleotides ABID97_RS01430 and ABID97_RS01435 overlap by 4 nucleotides
ABID97_RS01420: ABID97_RS01420 - cyclopropane-fatty-acyl-phospholipid synthase family protein, at 286,214 to 287,482
_RS01420
ABID97_RS01425: ABID97_RS01425 - bifunctional salicylyl-CoA 5-hydroxylase/oxidoreductase, at 287,599 to 289,986
_RS01425
ABID97_RS01430: ABID97_RS01430 - MarR family transcriptional regulator, at 289,988 to 290,464
_RS01430
ABID97_RS01435: ABID97_RS01435 - enoyl-CoA hydratase family protein, at 290,461 to 291,315
_RS01435
Position (kb) 287
288
289
290 Strain fitness (log2 ratio) -2
-1
0
1 at 286.635 kb on + strand, within ABID97_RS01420 at 286.713 kb on + strand, within ABID97_RS01420 at 286.713 kb on + strand, within ABID97_RS01420 at 286.713 kb on + strand, within ABID97_RS01420 at 286.713 kb on + strand, within ABID97_RS01420 at 286.714 kb on - strand, within ABID97_RS01420 at 286.714 kb on - strand, within ABID97_RS01420 at 286.714 kb on - strand, within ABID97_RS01420 at 286.911 kb on + strand, within ABID97_RS01420 at 287.059 kb on - strand, within ABID97_RS01420 at 287.059 kb on - strand, within ABID97_RS01420 at 287.070 kb on + strand, within ABID97_RS01420 at 287.070 kb on + strand, within ABID97_RS01420 at 287.070 kb on + strand, within ABID97_RS01420 at 287.101 kb on - strand, within ABID97_RS01420 at 287.286 kb on - strand, within ABID97_RS01420 at 287.301 kb on + strand, within ABID97_RS01420 at 287.302 kb on - strand, within ABID97_RS01420 at 287.302 kb on - strand, within ABID97_RS01420 at 287.302 kb on - strand, within ABID97_RS01420 at 287.468 kb on + strand at 287.496 kb on + strand at 287.497 kb on - strand at 287.552 kb on + strand at 287.553 kb on - strand at 287.553 kb on - strand at 287.555 kb on + strand at 287.556 kb on - strand at 287.556 kb on - strand at 287.556 kb on - strand at 288.034 kb on + strand, within ABID97_RS01425 at 288.035 kb on - strand, within ABID97_RS01425 at 288.275 kb on + strand, within ABID97_RS01425 at 288.350 kb on - strand, within ABID97_RS01425 at 288.350 kb on - strand, within ABID97_RS01425 at 288.613 kb on + strand, within ABID97_RS01425 at 288.727 kb on + strand, within ABID97_RS01425 at 288.803 kb on - strand, within ABID97_RS01425 at 288.910 kb on + strand, within ABID97_RS01425 at 288.911 kb on - strand, within ABID97_RS01425 at 288.911 kb on - strand, within ABID97_RS01425 at 288.911 kb on - strand, within ABID97_RS01425 at 289.051 kb on + strand, within ABID97_RS01425 at 289.052 kb on - strand, within ABID97_RS01425 at 289.052 kb on - strand, within ABID97_RS01425 at 289.052 kb on - strand, within ABID97_RS01425 at 289.372 kb on + strand, within ABID97_RS01425 at 289.654 kb on + strand, within ABID97_RS01425 at 289.666 kb on + strand, within ABID97_RS01425 at 289.667 kb on - strand, within ABID97_RS01425 at 289.667 kb on - strand, within ABID97_RS01425 at 289.879 kb on + strand at 290.471 kb on - strand at 290.471 kb on - strand at 290.521 kb on + strand at 290.617 kb on + strand, within ABID97_RS01435 at 290.618 kb on - strand, within ABID97_RS01435 at 290.618 kb on - strand, within ABID97_RS01435 at 290.653 kb on + strand, within ABID97_RS01435 at 290.940 kb on - strand, within ABID97_RS01435 at 290.940 kb on - strand, within ABID97_RS01435
Per-strain Table
Position Strand Gene LocusTag Fraction L-Malic (C) remove 286,635 + ABID97_RS01420 0.33 +0.2 286,713 + ABID97_RS01420 0.39 +1.2 286,713 + ABID97_RS01420 0.39 -0.8 286,713 + ABID97_RS01420 0.39 +0.2 286,713 + ABID97_RS01420 0.39 -0.5 286,714 - ABID97_RS01420 0.39 -0.4 286,714 - ABID97_RS01420 0.39 -0.7 286,714 - ABID97_RS01420 0.39 -0.7 286,911 + ABID97_RS01420 0.55 -0.7 287,059 - ABID97_RS01420 0.67 -0.5 287,059 - ABID97_RS01420 0.67 +0.5 287,070 + ABID97_RS01420 0.67 -0.8 287,070 + ABID97_RS01420 0.67 -0.0 287,070 + ABID97_RS01420 0.67 -0.4 287,101 - ABID97_RS01420 0.70 -0.4 287,286 - ABID97_RS01420 0.84 -0.5 287,301 + ABID97_RS01420 0.86 -0.1 287,302 - ABID97_RS01420 0.86 -0.4 287,302 - ABID97_RS01420 0.86 -0.2 287,302 - ABID97_RS01420 0.86 -0.2 287,468 + -2.2 287,496 + +0.1 287,497 - +0.2 287,552 + -0.0 287,553 - +0.3 287,553 - +0.2 287,555 + +0.4 287,556 - +0.2 287,556 - -1.7 287,556 - +0.7 288,034 + ABID97_RS01425 0.18 -0.1 288,035 - ABID97_RS01425 0.18 +0.1 288,275 + ABID97_RS01425 0.28 +0.4 288,350 - ABID97_RS01425 0.31 -0.5 288,350 - ABID97_RS01425 0.31 +0.8 288,613 + ABID97_RS01425 0.42 +0.1 288,727 + ABID97_RS01425 0.47 -0.1 288,803 - ABID97_RS01425 0.50 +0.2 288,910 + ABID97_RS01425 0.55 +0.1 288,911 - ABID97_RS01425 0.55 -0.0 288,911 - ABID97_RS01425 0.55 -0.5 288,911 - ABID97_RS01425 0.55 +0.3 289,051 + ABID97_RS01425 0.61 -0.2 289,052 - ABID97_RS01425 0.61 +0.1 289,052 - ABID97_RS01425 0.61 -0.4 289,052 - ABID97_RS01425 0.61 +0.4 289,372 + ABID97_RS01425 0.74 +0.5 289,654 + ABID97_RS01425 0.86 +0.1 289,666 + ABID97_RS01425 0.87 -0.1 289,667 - ABID97_RS01425 0.87 -0.1 289,667 - ABID97_RS01425 0.87 -0.0 289,879 + +0.1 290,471 - -1.0 290,471 - -0.3 290,521 + -0.3 290,617 + ABID97_RS01435 0.18 -0.6 290,618 - ABID97_RS01435 0.18 -0.3 290,618 - ABID97_RS01435 0.18 +1.5 290,653 + ABID97_RS01435 0.22 -0.3 290,940 - ABID97_RS01435 0.56 +0.4 290,940 - ABID97_RS01435 0.56 -0.5
Or see this region's nucleotide sequence