Strain Fitness in Pseudomonas syringae pv. syringae B728a ΔmexB around Psyr_3159

Experiment: KB with Nalidixic 0.775 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Nalidixic 0.775 ug/ml
3,785,208	-		Psyr_3158	0.16	-0.9
3,785,318	+		Psyr_3158	0.25	+1.5
3,785,318	+		Psyr_3158	0.25	-0.1
3,785,463	-		Psyr_3158	0.37	+0.9
3,785,512	-		Psyr_3158	0.41	+0.3
3,785,575	-		Psyr_3158	0.47	+0.3
3,785,575	-		Psyr_3158	0.47	-0.1
3,786,133	+				+0.4
3,786,133	+				+0.1
3,786,133	+				+0.5
3,786,134	-				+0.7
3,786,134	-				+0.4
3,786,134	-				+0.8
3,786,134	-				-0.5
3,786,264	+				-0.8
3,786,265	-				-0.2
3,786,267	+				-2.2
3,786,267	+				-1.5
3,786,268	-				+0.1
3,786,268	-				-0.4
3,786,295	-				+0.2
3,786,333	+				+1.5
3,786,333	+				-0.4
3,786,333	+				+0.3
3,786,334	-				+0.0
3,786,334	-				-1.2
3,786,334	-				+1.0
3,786,334	-				+0.6
3,786,334	-				+2.4
3,786,334	-				-0.3
3,786,531	+		Psyr_3159	0.25	+0.3
3,786,594	+		Psyr_3159	0.29	+0.8
3,786,595	-		Psyr_3159	0.29	+1.8
3,786,595	-		Psyr_3159	0.29	+0.1
3,786,621	-		Psyr_3159	0.31	-0.5
3,786,621	-		Psyr_3159	0.31	+2.8
3,786,648	+		Psyr_3159	0.33	+0.4
3,786,648	+		Psyr_3159	0.33	+0.3
3,786,648	+		Psyr_3159	0.33	-1.0
3,786,649	-		Psyr_3159	0.33	-0.1
3,786,649	-		Psyr_3159	0.33	-0.6
3,786,649	-		Psyr_3159	0.33	+0.4
3,786,649	-		Psyr_3159	0.33	-0.6
3,786,682	+		Psyr_3159	0.36	+1.0
3,787,269	+		Psyr_3159	0.79	-0.2
3,787,270	-		Psyr_3159	0.79	+0.2
3,787,341	+		Psyr_3159	0.85	+0.1
3,787,341	+		Psyr_3159	0.85	+0.8
3,787,341	+		Psyr_3159	0.85	+0.3
3,787,342	-		Psyr_3159	0.85	-1.7
3,787,342	-		Psyr_3159	0.85	-1.2
3,787,342	-		Psyr_3159	0.85	+0.4
3,787,342	-		Psyr_3159	0.85	-0.5
3,787,347	+		Psyr_3159	0.85	+1.1
3,787,347	+		Psyr_3159	0.85	-0.7
3,787,348	-		Psyr_3159	0.85	-0.2
3,787,348	-		Psyr_3159	0.85	+1.3
3,787,428	+				-1.0
3,787,458	+				+0.2
3,787,553	-				-1.1
3,787,553	-				-1.4
3,787,553	-				+1.3
3,787,603	+				-1.0
3,787,603	+				-1.7
3,787,603	+				+1.3
3,787,604	-				-0.2
3,787,720	+		Psyr_3160	0.13	+0.6
3,787,720	+		Psyr_3160	0.13	+0.1
3,787,720	+		Psyr_3160	0.13	+1.0
3,787,721	-		Psyr_3160	0.13	-0.6
3,787,721	-		Psyr_3160	0.13	-0.6
3,787,721	-		Psyr_3160	0.13	-0.0
3,787,721	-		Psyr_3160	0.13	+0.3
3,788,051	+		Psyr_3160	0.37	-0.4
3,788,102	-		Psyr_3160	0.41	+0.6
3,788,144	+		Psyr_3160	0.44	-0.0
3,788,144	+		Psyr_3160	0.44	+0.1
3,788,145	-		Psyr_3160	0.44	-1.5
3,788,145	-		Psyr_3160	0.44	-0.2
3,788,154	+		Psyr_3160	0.45	+0.4
3,788,154	+		Psyr_3160	0.45	+0.1
3,788,156	+		Psyr_3160	0.45	+0.1
3,788,156	+		Psyr_3160	0.45	+0.5
3,788,156	+		Psyr_3160	0.45	+1.8
3,788,156	+		Psyr_3160	0.45	+0.8
3,788,156	+		Psyr_3160	0.45	+0.3
3,788,156	+		Psyr_3160	0.45	+0.4
3,788,156	+		Psyr_3160	0.45	+0.2
3,788,156	+		Psyr_3160	0.45	+0.4
3,788,157	-		Psyr_3160	0.45	+0.8
3,788,157	-		Psyr_3160	0.45	+1.3
3,788,157	-		Psyr_3160	0.45	+0.1