Strain Fitness in Pseudomonas syringae pv. syringae B728a ΔmexB around Psyr_2881

Experiment: KB with Nalidixic 0.775 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Nalidixic 0.775 ug/ml
3,455,731	+				-1.4
3,455,731	+				-2.6
3,455,731	+				-2.3
3,455,732	-				-0.3
3,455,732	-				+0.2
3,455,733	+				-1.9
3,455,733	+				-1.4
3,455,733	+				-0.1
3,455,733	+				-0.3
3,455,733	+				-2.2
3,455,733	+				-0.4
3,455,734	-				+0.2
3,455,734	-				+1.9
3,455,734	-				+0.3
3,455,734	-				-0.1
3,455,734	-				+0.7
3,455,734	-				-0.8
3,455,734	-				-0.1
3,455,734	-				-0.7
3,455,742	-				+0.4
3,455,861	+				-1.9
3,455,861	+				-2.3
3,455,861	+				-2.8
3,455,861	+				-4.0
3,455,861	+				-1.7
3,455,861	+				-1.7
3,455,862	-				+0.3
3,455,862	-				+0.1
3,455,862	-				+0.0
3,455,863	+				-1.4
3,455,863	+				-1.1
3,455,863	+				-0.7
3,455,863	+				-0.5
3,455,864	-				-1.3
3,455,914	+				+0.3
3,455,915	-				+1.4
3,455,915	-				+0.9
3,455,916	+				+0.3
3,455,916	+				-0.1
3,455,916	+				+0.3
3,455,917	-				-0.3
3,455,917	-				-0.2
3,455,917	-				+0.2
3,455,921	-				+1.1
3,455,934	-				-1.4
3,456,070	+		Psyr_2880	0.35	-1.4
3,456,070	+		Psyr_2880	0.35	-2.6
3,456,070	+		Psyr_2880	0.35	-1.1
3,456,070	+		Psyr_2880	0.35	-0.1
3,456,070	+		Psyr_2880	0.35	-1.3
3,456,070	+		Psyr_2880	0.35	-1.9
3,456,070	+		Psyr_2880	0.35	-2.1
3,456,070	+		Psyr_2880	0.35	-2.8
3,456,071	-		Psyr_2880	0.36	-0.7
3,456,071	-		Psyr_2880	0.36	-2.6
3,456,071	-		Psyr_2880	0.36	-0.1
3,456,071	-		Psyr_2880	0.36	-0.1
3,456,071	-		Psyr_2880	0.36	-0.3
3,456,071	-		Psyr_2880	0.36	-0.0
3,456,076	+		Psyr_2880	0.37	+0.5
3,456,101	+		Psyr_2880	0.42	-1.9
3,456,101	+		Psyr_2880	0.42	-2.2
3,456,101	+		Psyr_2880	0.42	-1.8
3,456,102	-		Psyr_2880	0.42	+0.2
3,456,104	+		Psyr_2880	0.43	+0.5
3,456,105	-		Psyr_2880	0.43	-0.4
3,456,193	-		Psyr_2880	0.63	+1.3
3,456,208	+		Psyr_2880	0.66	-0.3
3,456,208	+		Psyr_2880	0.66	+0.7
3,456,326	+				+0.7
3,456,327	-				+0.6
3,456,425	-				+1.2
3,456,519	+				-0.1
3,456,520	-				-0.7
3,456,542	+				-0.1
3,456,542	+				+0.3
3,456,543	-				-0.6
3,456,543	-				+0.2
3,456,574	+				+1.4
3,456,621	-				+0.7
3,456,627	+				+1.1
3,456,665	+				-1.1
3,456,699	+				+2.7
3,456,699	+				-0.1
3,456,699	+				-0.3
3,456,699	+				-0.1
3,456,721	+				-0.7
3,456,721	+				-1.0
3,456,722	-				+0.9
3,456,722	-				-0.3
3,456,736	+				+0.9
3,456,736	+				-0.6
3,456,778	+				-0.1
3,456,778	+				+0.2
3,456,779	-				+0.4
3,456,849	-		Psyr_2881	0.17	-1.1
3,456,850	+		Psyr_2881	0.18	-0.4
3,456,850	+		Psyr_2881	0.18	+0.9
3,456,850	+		Psyr_2881	0.18	-0.3
3,456,960	+		Psyr_2881	0.32	-0.1
3,456,965	-		Psyr_2881	0.33	+0.1
3,456,965	-		Psyr_2881	0.33	-2.3
3,456,967	+		Psyr_2881	0.33	-0.1
3,456,967	+		Psyr_2881	0.33	-1.1
3,456,967	+		Psyr_2881	0.33	+1.2
3,456,990	+		Psyr_2881	0.36	-0.7
3,456,990	+		Psyr_2881	0.36	+0.2
3,457,032	+		Psyr_2881	0.41	-0.1
3,457,402	+		Psyr_2881	0.89	+3.2
3,457,402	+		Psyr_2881	0.89	+0.2
3,457,418	-				-0.6
3,457,423	+				+0.5
3,457,579	+				+0.9
3,457,694	+		Psyr_2882	0.17	+1.7
3,457,695	-		Psyr_2882	0.17	+0.9
3,457,695	-		Psyr_2882	0.17	+0.6
3,457,751	-		Psyr_2882	0.22	+0.7
3,457,822	+		Psyr_2882	0.28	+0.3
3,457,823	-		Psyr_2882	0.28	-0.1
3,457,823	-		Psyr_2882	0.28	+0.7
3,457,823	-		Psyr_2882	0.28	-0.4
3,457,823	-		Psyr_2882	0.28	+0.6
3,457,871	+		Psyr_2882	0.32	+0.0
3,458,086	-		Psyr_2882	0.50	-0.7
3,458,167	-		Psyr_2882	0.57	-0.4
3,458,210	-		Psyr_2882	0.60	+1.2
3,458,210	-		Psyr_2882	0.60	+2.5
3,458,347	+		Psyr_2882	0.72	-1.0
3,458,386	+		Psyr_2882	0.75	+1.3
3,458,386	+		Psyr_2882	0.75	+0.8
3,458,386	+		Psyr_2882	0.75	-0.4
3,458,387	-		Psyr_2882	0.75	+1.6