Strain Fitness in Pseudomonas syringae pv. syringae B728a ΔmexB around Psyr_2535

Experiment: KB with Nalidixic 0.775 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Nalidixic 0.775 ug/ml
2,948,599	-		Psyr_2534	0.37	+0.4
2,948,864	+		Psyr_2534	0.67	+0.5
2,948,892	-		Psyr_2534	0.70	-0.1
2,948,943	+		Psyr_2534	0.76	+1.1
2,948,943	+		Psyr_2534	0.76	-0.4
2,948,944	-		Psyr_2534	0.76	-0.5
2,948,944	-		Psyr_2534	0.76	+1.1
2,948,994	+		Psyr_2534	0.82	-0.4
2,948,995	-		Psyr_2534	0.82	-0.1
2,949,099	+				+1.3
2,949,100	-				+0.3
2,949,100	-				+0.4
2,949,102	+				-0.6
2,949,102	+				-1.8
2,949,102	+				-1.0
2,949,108	+				+0.6
2,949,217	+				+0.9
2,949,217	+				-1.4
2,949,218	-				+1.4
2,949,218	-				+0.3
2,949,249	+				+2.2
2,949,249	+				+0.1
2,949,250	-				+0.0
2,949,250	-				+0.2
2,949,277	+				-0.4
2,949,278	-				+0.4
2,949,278	-				+0.2
2,949,278	-				-0.5
2,949,458	+				-1.6
2,949,458	+				-1.4
2,949,458	+				-1.9
2,949,458	+				-0.6
2,949,459	-				+0.9
2,949,459	-				+0.1
2,949,459	-				+2.5
2,949,459	-				-0.7
2,949,459	-				-1.2
2,949,474	+				-1.8
2,949,475	-				+0.4
2,949,503	+				+1.5
2,949,503	+				+0.8
2,949,503	+				+0.4
2,949,504	-				+0.7
2,949,504	-				+0.3
2,949,537	-				-1.0
2,949,537	-				-0.9
2,949,557	+				+2.5
2,949,648	+				-0.7
2,949,760	-		Psyr_2535	0.18	+0.6
2,949,760	-		Psyr_2535	0.18	-0.3
2,949,877	+		Psyr_2535	0.29	-0.1
2,949,877	+		Psyr_2535	0.29	-0.7
2,949,878	-		Psyr_2535	0.30	+0.1
2,949,939	+		Psyr_2535	0.35	-0.4
2,949,939	+		Psyr_2535	0.35	+0.5
2,950,052	-		Psyr_2535	0.46	+0.2
2,950,052	-		Psyr_2535	0.46	+0.3
2,950,052	-		Psyr_2535	0.46	-1.0
2,950,052	-		Psyr_2535	0.46	-0.4
2,950,052	-		Psyr_2535	0.46	+0.0
2,950,078	-		Psyr_2535	0.49	-0.7
2,950,097	-		Psyr_2535	0.50	+0.2
2,950,166	+		Psyr_2535	0.57	+0.2
2,950,167	-		Psyr_2535	0.57	+0.8
2,950,436	+		Psyr_2535	0.83	+0.8
2,950,572	+				+0.0
2,950,572	+				+0.9
2,950,572	+				+1.0
2,950,572	+				+0.6
2,950,572	+				+0.5
2,950,572	+				-0.8
2,950,572	+				-1.2
2,950,572	+				+1.0
2,950,573	-				-0.1
2,950,573	-				+1.6
2,950,573	-				-0.1
2,950,573	-				-0.7
2,950,573	-				+0.9
2,950,573	-				-0.2
2,950,573	-				-0.3
2,950,573	-				+0.6
2,950,574	+				-0.0
2,950,574	+				+0.4
2,950,574	+				+0.6
2,950,575	-				+1.7
2,950,709	-				+1.1
2,950,886	-		Psyr_2536	0.20	+1.2
2,950,919	+		Psyr_2536	0.23	+0.5
2,950,919	+		Psyr_2536	0.23	+1.5
2,950,919	+		Psyr_2536	0.23	+1.0
2,950,919	+		Psyr_2536	0.23	-1.3
2,950,920	-		Psyr_2536	0.23	-1.0
2,950,920	-		Psyr_2536	0.23	-1.8
2,950,920	-		Psyr_2536	0.23	-0.7
2,950,920	-		Psyr_2536	0.23	-0.3
2,950,920	-		Psyr_2536	0.23	+0.6
2,951,392	+		Psyr_2536	0.71	-0.2
2,951,393	-		Psyr_2536	0.71	+0.4
2,951,393	-		Psyr_2536	0.71	+0.5
2,951,393	-		Psyr_2536	0.71	+1.1