Strain Fitness in Pseudomonas syringae pv. syringae B728a ΔmexB around Psyr_2102

Experiment: KB with Nalidixic 0.775 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Nalidixic 0.775 ug/ml
2,451,505	+		Psyr_2101	0.40	-0.9
2,451,506	-		Psyr_2101	0.41	-0.1
2,451,506	-		Psyr_2101	0.41	-1.8
2,451,508	+		Psyr_2101	0.41	+0.7
2,451,508	+		Psyr_2101	0.41	-1.1
2,451,508	+		Psyr_2101	0.41	+0.5
2,451,508	+		Psyr_2101	0.41	+1.1
2,451,509	-		Psyr_2101	0.41	+0.5
2,451,537	+		Psyr_2101	0.42	+1.7
2,451,537	+		Psyr_2101	0.42	+0.0
2,451,538	-		Psyr_2101	0.42	+0.3
2,451,681	+		Psyr_2101	0.51	-0.1
2,451,681	+		Psyr_2101	0.51	-0.5
2,451,681	+		Psyr_2101	0.51	-0.0
2,451,681	+		Psyr_2101	0.51	-1.4
2,451,681	+		Psyr_2101	0.51	+0.0
2,451,681	+		Psyr_2101	0.51	+0.5
2,451,681	+		Psyr_2101	0.51	+0.9
2,451,681	+		Psyr_2101	0.51	-1.0
2,451,682	-		Psyr_2101	0.51	-1.3
2,451,682	-		Psyr_2101	0.51	+0.7
2,451,682	-		Psyr_2101	0.51	-1.6
2,451,682	-		Psyr_2101	0.51	+1.9
2,452,015	+		Psyr_2101	0.71	+0.4
2,452,030	+		Psyr_2101	0.72	+0.4
2,452,030	+		Psyr_2101	0.72	-0.3
2,452,295	-		Psyr_2101	0.88	-0.9
2,452,381	+				-0.4
2,452,382	-				-0.9
2,452,868	+		Psyr_2102	0.30	+0.9
2,452,868	+		Psyr_2102	0.30	+0.9
2,452,868	+		Psyr_2102	0.30	-0.5
2,452,868	+		Psyr_2102	0.30	+0.2
2,452,868	+		Psyr_2102	0.30	+0.6
2,452,868	+		Psyr_2102	0.30	-0.1
2,452,869	-		Psyr_2102	0.30	+0.9
2,452,869	-		Psyr_2102	0.30	+0.5
2,452,869	-		Psyr_2102	0.30	+0.8
2,452,869	-		Psyr_2102	0.30	+0.5
2,452,869	-		Psyr_2102	0.30	+0.3
2,452,869	-		Psyr_2102	0.30	+1.0
2,452,964	+		Psyr_2102	0.38	-0.5
2,452,964	+		Psyr_2102	0.38	+1.2
2,452,964	+		Psyr_2102	0.38	+1.6
2,452,964	+		Psyr_2102	0.38	+0.2
2,452,964	+		Psyr_2102	0.38	+2.1
2,452,965	-		Psyr_2102	0.38	-0.1
2,452,965	-		Psyr_2102	0.38	+0.1
2,452,965	-		Psyr_2102	0.38	-0.1
2,453,108	+		Psyr_2102	0.50	+0.1
2,453,109	-		Psyr_2102	0.50	-1.3
2,453,263	+		Psyr_2102	0.63	+1.1
2,453,263	+		Psyr_2102	0.63	-0.7
2,453,409	-		Psyr_2102	0.75	+0.2
2,453,409	-		Psyr_2102	0.75	+0.2
2,453,654	+				+0.9
2,453,706	+				-0.7
2,453,707	-				+0.2
2,453,707	-				+0.7
2,453,707	-				+0.3
2,453,733	+				+1.1
2,453,733	+				+1.0
2,453,733	+				-0.0
2,453,733	+				+0.9
2,453,734	-				+1.7
2,453,738	-				+0.4
2,453,738	-				-0.7
2,453,769	-				-1.4
2,453,937	+				+0.1
2,453,943	+				-0.4
2,453,943	+				-0.1
2,454,029	+				-1.1
2,454,029	+				-0.7
2,454,030	-				+1.4
2,454,030	-				+0.4
2,454,030	-				-0.3
2,454,267	-				-2.4
2,454,267	-				+0.9
2,454,275	+				-1.5
2,454,298	+				-0.4
2,454,457	-				-0.4
2,454,576	+				-0.9
2,454,576	+				+1.9
2,454,576	+				+0.0
2,454,576	+				-0.9
2,454,578	+				+1.0
2,454,579	-				-0.6
2,454,591	+				+1.0
2,454,625	+				-0.4
2,454,635	+				+0.9
2,454,635	+				+0.5
2,454,635	+				-0.1
2,454,635	+				+1.5
2,454,635	+				-0.7
2,454,635	+				+0.4
2,454,636	-				-1.7
2,454,636	-				-2.3
2,454,636	-				-3.4
2,454,636	-				-0.7
2,454,636	-				-1.1