Strain Fitness in Pseudomonas syringae pv. syringae B728a ΔmexB around Psyr_0806

Experiment: KB with Nalidixic 0.775 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Nalidixic 0.775 ug/ml
910,968	+		Psyr_0805	0.13	-0.2
911,023	-		Psyr_0805	0.18	-0.9
911,023	-		Psyr_0805	0.18	+1.3
911,068	+		Psyr_0805	0.22	+0.2
911,068	+		Psyr_0805	0.22	+0.6
911,068	+		Psyr_0805	0.22	-0.5
911,068	+		Psyr_0805	0.22	-0.9
911,068	+		Psyr_0805	0.22	+0.5
911,069	-		Psyr_0805	0.22	-0.1
911,069	-		Psyr_0805	0.22	+1.0
911,069	-		Psyr_0805	0.22	-0.6
911,069	-		Psyr_0805	0.22	-0.9
911,069	-		Psyr_0805	0.22	-0.5
911,205	+		Psyr_0805	0.35	+0.2
911,205	+		Psyr_0805	0.35	-0.7
911,240	+		Psyr_0805	0.38	-1.2
911,535	+		Psyr_0805	0.65	+0.4
911,535	+		Psyr_0805	0.65	-0.5
911,573	+		Psyr_0805	0.68	-1.6
911,612	+		Psyr_0805	0.72	-1.0
911,612	+		Psyr_0805	0.72	-0.0
911,613	-		Psyr_0805	0.72	+0.1
911,613	-		Psyr_0805	0.72	-0.0
911,613	-		Psyr_0805	0.72	+0.1
911,613	-		Psyr_0805	0.72	-0.6
911,613	-		Psyr_0805	0.72	+2.5
911,613	-		Psyr_0805	0.72	+0.6
911,712	-		Psyr_0805	0.81	-0.6
911,782	+		Psyr_0805	0.87	-0.5
911,916	+				+0.1
911,916	+				+0.9
911,917	-				-0.0
911,936	+				-0.6
911,957	+				-0.4
911,957	+				+0.4
911,957	+				+0.8
911,957	+				-0.6
911,957	+				+1.0
911,957	+				+1.4
911,957	+				-1.2
911,957	+				-0.2
911,958	-				+0.6
911,958	-				+2.1
911,958	-				-0.5
911,958	-				-2.4
911,958	-				+1.2
911,958	-				-1.3
911,958	-				+1.7
912,097	-		Psyr_0806	0.19	-1.9
912,097	-		Psyr_0806	0.19	+0.1
912,097	-		Psyr_0806	0.19	+1.0
912,301	+		Psyr_0806	0.40	-2.2
912,302	-		Psyr_0806	0.40	-0.6
912,476	+		Psyr_0806	0.59	+0.2
912,476	+		Psyr_0806	0.59	-0.3
912,477	-		Psyr_0806	0.59	+0.1
912,592	+		Psyr_0806	0.71	-2.2
912,592	+		Psyr_0806	0.71	+0.3
912,592	+		Psyr_0806	0.71	+1.0
912,592	+		Psyr_0806	0.71	+0.5
912,593	-		Psyr_0806	0.71	+0.2
912,640	+		Psyr_0806	0.76	+0.2
912,729	-		Psyr_0806	0.85	-1.0
912,729	-		Psyr_0806	0.85	-0.0
912,729	-		Psyr_0806	0.85	+1.0
912,729	-		Psyr_0806	0.85	-1.8
912,761	+		Psyr_0806	0.89	-1.1
912,762	-		Psyr_0806	0.89	+0.4
912,763	+		Psyr_0806	0.89	+0.6
912,763	+		Psyr_0806	0.89	-0.6
912,763	+		Psyr_0806	0.89	-0.3
912,763	+		Psyr_0806	0.89	+0.3
912,763	+		Psyr_0806	0.89	-1.8
912,763	+		Psyr_0806	0.89	-0.1
912,763	+		Psyr_0806	0.89	-0.9
912,763	+		Psyr_0806	0.89	-0.5
912,763	+		Psyr_0806	0.89	-0.3
912,763	+		Psyr_0806	0.89	-0.8
912,763	+		Psyr_0806	0.89	-0.3
912,763	+		Psyr_0806	0.89	-0.5
912,764	-		Psyr_0806	0.89	-0.0
912,764	-		Psyr_0806	0.89	-0.3
912,764	-		Psyr_0806	0.89	-0.5
912,764	-		Psyr_0806	0.89	-0.4
912,764	-		Psyr_0806	0.89	+0.2
912,862	+				-0.9
912,862	+				+1.0
912,862	+				-0.6
912,862	+				+0.2
912,863	-				-0.9
912,863	-				-0.3
912,863	-				-0.6
912,863	-				+2.0
912,866	+				+0.6
912,866	+				-0.3
912,866	+				-0.4
912,866	+				-0.6
912,866	+				-0.6
912,866	+				+1.3
912,873	+				+0.2
912,873	+				-0.3
912,873	+				-0.0
912,873	+				-1.7
912,873	+				-0.8
912,873	+				+0.5
913,288	+		Psyr_0807	0.56	-1.4
913,555	+				-1.8
913,555	+				-1.6
913,578	+				-1.1
913,716	-				+0.4